RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W YGR050CP53231 118 aa1.26□□□□□ -2.21
VAM3YOR106W YHR214C-EQ8TGK0 99 aa1.26□□□□□ -2.21
VAM3YOR106W RPB3P16370 318 aaKnown RBP1.25□□□□□ -2.21
VAM3YOR106W YFR032C-BQ8TGU2 87 aa1.25□□□□□ -2.21
VAM3YOR106W RPL27AP0C2H6 136 aaKnown RBP1.24□□□□□ -2.21
VAM3YOR106W GCN3P14741 305 aa1.24□□□□□ -2.21
VAM3YOR106W YHL042WP38729 150 aa1.24□□□□□ -2.21
VAM3YOR106W YER034WP40022 185 aaKnown RBP1.24□□□□□ -2.21
VAM3YOR106W YFL065CP43539 102 aa1.24□□□□□ -2.21
VAM3YOR106W YNL247WP53852 767 aaKnown RBP1.24□□□□□ -2.21
VAM3YOR106W YIL177CP40434 1758 aa1.24□□□□□ -2.21
VAM3YOR106W YJL225CP40889 1758 aa1.24□□□□□ -2.21
VAM3YOR106W SEC4P07560 215 aaKnown RBP1.23□□□□□ -2.21
VAM3YOR106W ATP15P21306 62 aa1.23□□□□□ -2.21
VAM3YOR106W MGM101P32787 269 aaKnown RBP1.23□□□□□ -2.21
VAM3YOR106W AIM36Q03798 255 aa1.23□□□□□ -2.21
VAM3YOR106W YPR174CQ06616 221 aaPredicted RBP1.23□□□□□ -2.21
VAM3YOR106W JLP1Q12358 412 aa1.23□□□□□ -2.21
VAM3YOR106W SEY1Q99287 776 aa1.23□□□□□ -2.21
VAM3YOR106W YBR121C-AP0C5L4 52 aa1.22□□□□□ -2.21
VAM3YOR106W CKS1P20486 150 aaKnown RBP1.22□□□□□ -2.21
VAM3YOR106W TVP23P38962 199 aa1.22□□□□□ -2.21
VAM3YOR106W YPL073CP40323 161 aa1.22□□□□□ -2.21
VAM3YOR106W MDM35O60200 86 aa1.21□□□□□ -2.22
VAM3YOR106W RPL25P04456 142 aaKnown RBP1.21□□□□□ -2.22
VAM3YOR106W PRX1P34227 261 aaKnown RBP1.21□□□□□ -2.22
VAM3YOR106W ECM4P36156 370 aa1.21□□□□□ -2.22
VAM3YOR106W HYR1P40581 163 aaKnown RBP1.21□□□□□ -2.22
VAM3YOR106W ADO1P47143 340 aaKnown RBP1.21□□□□□ -2.22
VAM3YOR106W MAG1P22134 296 aaKnown RBP1.2□□□□□ -2.22
VAM3YOR106W RTC3P38804 111 aaPredicted RBP1.2□□□□□ -2.22
VAM3YOR106W YRB1P41920 201 aaKnown RBP1.2□□□□□ -2.22
VAM3YOR106W PDR17P53844 350 aa1.2□□□□□ -2.22
VAM3YOR106W YOL160WQ08321 113 aa1.2□□□□□ -2.22
VAM3YOR106W IKI3Q06706 1349 aaKnown RBP1.19□□□□□ -2.22
VAM3YOR106W IRC18P47056 224 aa1.19□□□□□ -2.22
VAM3YOR106W MGA1P53050 456 aa1.19□□□□□ -2.22
VAM3YOR106W COG5P53951 403 aa1.19□□□□□ -2.22
VAM3YOR106W YKL183C-AQ3E765 70 aa1.19□□□□□ -2.22
VAM3YOR106W ERG28P40030 148 aa1.18□□□□□ -2.22
VAM3YOR106W LSM7P53905 115 aaKnown RBP1.18□□□□□ -2.22
VAM3YOR106W YRA1Q12159 226 aaKnown RBP1.18□□□□□ -2.22
VAM3YOR106W ACC1Q00955 2233 aaKnown RBP1.17□□□□□ -2.22
VAM3YOR106W SPO13P23624 291 aa1.17□□□□□ -2.22
VAM3YOR106W BMH2P34730 273 aaKnown RBP1.17□□□□□ -2.22
VAM3YOR106W RTR1P40084 226 aaPredicted RBP1.17□□□□□ -2.22
VAM3YOR106W YFH7P43591 353 aa1.17□□□□□ -2.22
VAM3YOR106W PET191Q02772 108 aa1.17□□□□□ -2.22
VAM3YOR106W ODC2Q99297 307 aa1.17□□□□□ -2.22
VAM3YOR106W NHP6BP11633 99 aaKnown RBP1.16□□□□□ -2.22
VAM3YOR106W TRM5P38793 499 aa1.16□□□□□ -2.22
VAM3YOR106W MPC3P53311 146 aa1.16□□□□□ -2.22
VAM3YOR106W HNT1Q04344 158 aaKnown RBP1.16□□□□□ -2.22
VAM3YOR106W MDM32Q12171 622 aa1.16□□□□□ -2.22
VAM3YOR106W HMF1P40037 129 aaKnown RBP1.15□□□□□ -2.23
VAM3YOR106W YNL194CP40169 301 aa1.15□□□□□ -2.23
VAM3YOR106W YMR252CQ04814 134 aa1.15□□□□□ -2.23
VAM3YOR106W YNG1Q08465 219 aa1.15□□□□□ -2.23
VAM3YOR106W DGA1Q08650 418 aa1.15□□□□□ -2.23
VAM3YOR106W CDC36P06100 191 aaPredicted RBP1.14□□□□□ -2.23
VAM3YOR106W OTU1P43558 301 aa1.14□□□□□ -2.23
VAM3YOR106W POR1P04840 283 aaKnown RBP1.13□□□□□ -2.23
VAM3YOR106W MER1P16523 270 aa1.13□□□□□ -2.23
VAM3YOR106W STE18P18852 110 aa1.13□□□□□ -2.23
VAM3YOR106W CBT1P36038 271 aaPredicted RBP1.13□□□□□ -2.23
VAM3YOR106W GET1P53192 235 aa1.13□□□□□ -2.23
VAM3YOR106W NCB2Q92317 146 aa1.13□□□□□ -2.23
VAM3YOR106W YCL042WP25572 119 aa1.11□□□□□ -2.23
VAM3YOR106W STP22P25604 385 aa1.11□□□□□ -2.23
VAM3YOR106W PAN3P36102 679 aaPredicted RBP1.11□□□□□ -2.23
VAM3YOR106W RAD17P48581 401 aa1.11□□□□□ -2.23
VAM3YOR106W YCR090CP25654 182 aaKnown RBP1.1□□□□□ -2.23
VAM3YOR106W OCH1P31755 480 aa1.1□□□□□ -2.23
VAM3YOR106W SPS18P32572 300 aa1.1□□□□□ -2.23
VAM3YOR106W PRP18P33411 251 aaPredicted RBP1.1□□□□□ -2.23
VAM3YOR106W HPA3P39979 161 aa1.1□□□□□ -2.23
VAM3YOR106W YDR157WA0A023PZE8 133 aa1.09□□□□□ -2.23
VAM3YOR106W COQ1P18900 473 aa1.09□□□□□ -2.23
VAM3YOR106W AIM25P47140 327 aa1.09□□□□□ -2.23
VAM3YOR106W DAD4P69851 72 aa1.09□□□□□ -2.23
VAM3YOR106W PRP11Q07350 266 aaPredicted RBP1.09□□□□□ -2.23
VAM3YOR106W SLH1P53327 1967 aaKnown RBP1.08□□□□□ -2.24
VAM3YOR106W YHL018WP38744 120 aaPredicted RBP1.08□□□□□ -2.24
VAM3YOR106W YCR087C-AP37263 153 aa1.07□□□□□ -2.24
VAM3YOR106W YEL008WP40001 126 aa1.07□□□□□ -2.24
VAM3YOR106W CWC23P52868 283 aaPredicted RBP1.07□□□□□ -2.24
VAM3YOR106W IRC23Q08416 157 aa1.07□□□□□ -2.24
VAM3YOR106W AIM2P39721 246 aa1.06□□□□□ -2.24
VAM3YOR106W YEA4P40004 342 aa1.06□□□□□ -2.24
VAM3YOR106W ERG10P41338 398 aaKnown RBP1.06□□□□□ -2.24
VAM3YOR106W YMR295CQ03559 197 aa1.06□□□□□ -2.24
VAM3YOR106W COX8P04039 78 aa1.05□□□□□ -2.24
VAM3YOR106W CDC33P07260 213 aaKnown RBP1.05□□□□□ -2.24
VAM3YOR106W RPB7P34087 171 aa1.05□□□□□ -2.24
VAM3YOR106W YLR460CP54007 376 aa1.05□□□□□ -2.24
VAM3YOR106W UPS3Q04006 179 aa1.05□□□□□ -2.24
VAM3YOR106W DYN3Q04949 312 aa1.05□□□□□ -2.24
VAM3YOR106W FUS2Q05670 677 aa1.05□□□□□ -2.24
VAM3YOR106W LCL2Q08045 131 aa1.05□□□□□ -2.24
VAM3YOR106W FIT2Q08906 153 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms