RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W RPL13BP40212 199 aaKnown RBP1.47□□□□□ -2.17
SWM2YNR004W CWC23P52868 283 aaPredicted RBP1.47□□□□□ -2.17
SWM2YNR004W BOL2P53082 120 aa1.47□□□□□ -2.17
SWM2YNR004W RTC4P53850 401 aa1.47□□□□□ -2.17
SWM2YNR004W GRX5Q02784 150 aa1.47□□□□□ -2.17
SWM2YNR004W CUE4Q04201 117 aaPredicted RBP1.47□□□□□ -2.17
SWM2YNR004W TRM12Q04235 462 aa1.47□□□□□ -2.17
SWM2YNR004W HNT1Q04344 158 aaKnown RBP1.47□□□□□ -2.17
SWM2YNR004W YMR315WQ04869 349 aaKnown RBP1.47□□□□□ -2.17
SWM2YNR004W MCP1Q12106 302 aa1.47□□□□□ -2.17
SWM2YNR004W RPL13AQ12690 199 aaPredicted RBP1.47□□□□□ -2.17
SWM2YNR004W ODC2Q99297 307 aa1.47□□□□□ -2.17
SWM2YNR004W YDR157WA0A023PZE8 133 aa1.46□□□□□ -2.18
SWM2YNR004W CDC36P06100 191 aaPredicted RBP1.46□□□□□ -2.18
SWM2YNR004W SIR2P06700 562 aa1.46□□□□□ -2.18
SWM2YNR004W MER1P16523 270 aa1.46□□□□□ -2.18
SWM2YNR004W YPK2P18961 677 aa1.46□□□□□ -2.18
SWM2YNR004W ASF2P32448 525 aaPredicted RBP1.46□□□□□ -2.18
SWM2YNR004W GAA1P39012 614 aa1.46□□□□□ -2.18
SWM2YNR004W TMA22P47089 198 aaPredicted RBP1.46□□□□□ -2.18
SWM2YNR004W GAS3Q03655 524 aa1.46□□□□□ -2.18
SWM2YNR004W YET3Q07451 203 aa1.46□□□□□ -2.18
SWM2YNR004W YPL162CQ12042 273 aa1.46□□□□□ -2.18
SWM2YNR004W MET5P47169 1442 aa1.46□□□□□ -2.18
SWM2YNR004W CPA1P07258 411 aaKnown RBP1.45□□□□□ -2.18
SWM2YNR004W RPS24AP0CX31 135 aaKnown RBP1.45□□□□□ -2.18
SWM2YNR004W RPS24BP0CX32 135 aaKnown RBP1.45□□□□□ -2.18
SWM2YNR004W RFA3P26755 122 aaKnown RBP1.45□□□□□ -2.18
SWM2YNR004W TAF14P35189 244 aa1.45□□□□□ -2.18
SWM2YNR004W KDX1P36005 433 aa1.45□□□□□ -2.18
SWM2YNR004W GLE2P40066 365 aa1.45□□□□□ -2.18
SWM2YNR004W AIM25P47140 327 aa1.45□□□□□ -2.18
SWM2YNR004W UBC12P52491 188 aa1.45□□□□□ -2.18
SWM2YNR004W POP3P53833 195 aaPredicted RBP1.45□□□□□ -2.18
SWM2YNR004W YNG1Q08465 219 aa1.45□□□□□ -2.18
SWM2YNR004W IKI3Q06706 1349 aaKnown RBP1.44□□□□□ -2.18
SWM2YNR004W GPA2P10823 449 aa1.44□□□□□ -2.18
SWM2YNR004W SNF4P12904 322 aa1.44□□□□□ -2.18
SWM2YNR004W CAF4P36130 643 aa1.44□□□□□ -2.18
SWM2YNR004W UTP30P36144 274 aaKnown RBP1.44□□□□□ -2.18
SWM2YNR004W TVP38P36164 337 aa1.44□□□□□ -2.18
SWM2YNR004W YBR220CP38318 560 aa1.44□□□□□ -2.18
SWM2YNR004W SHG1P38337 142 aa1.44□□□□□ -2.18
SWM2YNR004W YER034WP40022 185 aaKnown RBP1.44□□□□□ -2.18
SWM2YNR004W LSM4P40070 187 aaKnown RBP1.44□□□□□ -2.18
SWM2YNR004W YER134CP40081 178 aa1.44□□□□□ -2.18
SWM2YNR004W ERJ5P43613 295 aaPredicted RBP1.44□□□□□ -2.18
SWM2YNR004W MMS2P53152 137 aa1.44□□□□□ -2.18
SWM2YNR004W GIM3P53900 129 aa1.44□□□□□ -2.18
SWM2YNR004W NUP49Q02199 472 aa1.44□□□□□ -2.18
SWM2YNR004W YHR007C-AQ07074 71 aa1.44□□□□□ -2.18
SWM2YNR004W YLR036CQ07986 203 aa1.44□□□□□ -2.18
SWM2YNR004W TUS1Q06412 1307 aa1.43□□□□□ -2.18
SWM2YNR004W MATALPHA2P0CY08 210 aa1.43□□□□□ -2.18
SWM2YNR004W HMLALPHA2P0CY09 210 aa1.43□□□□□ -2.18
SWM2YNR004W UPS2P35200 230 aa1.43□□□□□ -2.18
SWM2YNR004W OPY1P38271 328 aa1.43□□□□□ -2.18
SWM2YNR004W YBR219CP38317 127 aa1.43□□□□□ -2.18
SWM2YNR004W PDS1P40316 373 aaPredicted RBP1.43□□□□□ -2.18
SWM2YNR004W ERG10P41338 398 aaKnown RBP1.43□□□□□ -2.18
SWM2YNR004W FMP32P43557 207 aa1.43□□□□□ -2.18
SWM2YNR004W SKI6P46948 246 aaPredicted RBP1.43□□□□□ -2.18
SWM2YNR004W YLR236CA0A023PZG4 107 aa1.42□□□□□ -2.18
SWM2YNR004W CBF1P17106 351 aa1.42□□□□□ -2.18
SWM2YNR004W FPR1P20081 114 aaKnown RBP1.42□□□□□ -2.18
SWM2YNR004W EDC3P39998 551 aaKnown RBP1.42□□□□□ -2.18
SWM2YNR004W TDA4P47153 279 aa1.42□□□□□ -2.18
SWM2YNR004W KNH1P50112 268 aa1.42□□□□□ -2.18
SWM2YNR004W YMR295CQ03559 197 aa1.42□□□□□ -2.18
SWM2YNR004W SPG3Q04398 127 aaPredicted RBP1.42□□□□□ -2.18
SWM2YNR004W SHH3Q04487 196 aa1.42□□□□□ -2.18
SWM2YNR004W GIS3Q12418 502 aa1.42□□□□□ -2.18
SWM2YNR004W YFR032C-BQ8TGU2 87 aa1.42□□□□□ -2.18
SWM2YNR004W MBF1O14467 151 aaKnown RBP1.41□□□□□ -2.18
SWM2YNR004W QCR7P00128 127 aa1.41□□□□□ -2.18
SWM2YNR004W MRS1P07266 363 aa1.41□□□□□ -2.18
SWM2YNR004W ATP15P21306 62 aa1.41□□□□□ -2.18
SWM2YNR004W YKR045CP36138 183 aa1.41□□□□□ -2.18
SWM2YNR004W EAF6P47128 113 aa1.41□□□□□ -2.18
SWM2YNR004W YDR274CP87283 123 aa1.41□□□□□ -2.18
SWM2YNR004W PET191Q02772 108 aa1.41□□□□□ -2.18
SWM2YNR004W RCE1Q03530 315 aa1.41□□□□□ -2.18
SWM2YNR004W YLR162WQ06235 118 aa1.41□□□□□ -2.18
SWM2YNR004W YPR014CQ6B0W2 109 aa1.41□□□□□ -2.18
SWM2YNR004W FLO9P39712 1322 aa1.4□□□□□ -2.18
SWM2YNR004W ARG80P07249 177 aa1.4□□□□□ -2.19
SWM2YNR004W SEC11P15367 167 aa1.4□□□□□ -2.19
SWM2YNR004W MGT1P26188 188 aa1.4□□□□□ -2.19
SWM2YNR004W ATP7P30902 174 aa1.4□□□□□ -2.19
SWM2YNR004W OCH1P31755 480 aa1.4□□□□□ -2.19
SWM2YNR004W YEA4P40004 342 aa1.4□□□□□ -2.19
SWM2YNR004W NOP19P53317 196 aaPredicted RBP1.4□□□□□ -2.19
SWM2YNR004W YNL247WP53852 767 aaKnown RBP1.4□□□□□ -2.19
SWM2YNR004W PLP1Q04004 230 aa1.4□□□□□ -2.19
SWM2YNR004W YPR174CQ06616 221 aaPredicted RBP1.4□□□□□ -2.19
SWM2YNR004W CSI2Q08054 341 aa1.4□□□□□ -2.19
SWM2YNR004W DGA1Q08650 418 aa1.4□□□□□ -2.19
SWM2YNR004W YHR214C-EQ8TGK0 99 aa1.4□□□□□ -2.19
SWM2YNR004W SPS18P32572 300 aa1.39□□□□□ -2.19
SWM2YNR004W PAN3P36102 679 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms