RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C SSS1P35179 80 aa7.44□□□□□ -1.22
RPD3YNL330C PRM5P40476 318 aa7.44□□□□□ -1.22
RPD3YNL330C YGL114WP53134 725 aa7.44□□□□□ -1.22
RPD3YNL330C TNA1P53322 534 aa7.44□□□□□ -1.22
RPD3YNL330C ALG12P53730 551 aa7.44□□□□□ -1.22
RPD3YNL330C PML1Q07930 204 aaPredicted RBP7.44□□□□□ -1.22
RPD3YNL330C SME1Q12330 94 aaPredicted RBP7.44□□□□□ -1.22
RPD3YNL330C YPT1P01123 206 aaKnown RBP7.43□□□□□ -1.22
RPD3YNL330C SAG1P20840 650 aa7.43□□□□□ -1.22
RPD3YNL330C LSB5P25369 354 aa7.43□□□□□ -1.22
RPD3YNL330C RPL14AP36105 138 aaKnown RBP7.43□□□□□ -1.22
RPD3YNL330C UTH1P36135 365 aa7.43□□□□□ -1.22
RPD3YNL330C SWD3P38123 315 aa7.43□□□□□ -1.22
RPD3YNL330C RPL14BP38754 138 aaKnown RBP7.43□□□□□ -1.22
RPD3YNL330C FLX1P40464 311 aa7.43□□□□□ -1.22
RPD3YNL330C TAX4P47030 604 aa7.43□□□□□ -1.22
RPD3YNL330C AVO2Q04749 426 aa7.43□□□□□ -1.22
RPD3YNL330C YMR254CQ04838 102 aa7.43□□□□□ -1.22
RPD3YNL330C PRP11Q07350 266 aaPredicted RBP7.43□□□□□ -1.22
RPD3YNL330C YPL264CQ08980 353 aa7.43□□□□□ -1.22
RPD3YNL330C BLM10P43583 2143 aa7.42□□□□□ -1.22
RPD3YNL330C PAU1P0CE88 120 aa7.42□□□□□ -1.22
RPD3YNL330C PAU14P0CE89 120 aa7.42□□□□□ -1.22
RPD3YNL330C PAU6P0CE90 120 aa7.42□□□□□ -1.22
RPD3YNL330C PAU18P0CE91 120 aa7.42□□□□□ -1.22
RPD3YNL330C PAU8P0CE92 120 aa7.42□□□□□ -1.22
RPD3YNL330C PAU11P0CE93 120 aa7.42□□□□□ -1.22
RPD3YNL330C YCR025CP25352 136 aa7.42□□□□□ -1.22
RPD3YNL330C NTC20P38302 140 aaPredicted RBP7.42□□□□□ -1.22
RPD3YNL330C PAU13P38725 120 aa7.42□□□□□ -1.22
RPD3YNL330C SUR2P38992 349 aa7.42□□□□□ -1.22
RPD3YNL330C YIL029CP40538 142 aa7.42□□□□□ -1.22
RPD3YNL330C PDR17P53844 350 aa7.42□□□□□ -1.22
RPD3YNL330C YVH1Q02256 364 aaKnown RBP7.42□□□□□ -1.22
RPD3YNL330C MRP51Q02950 344 aa7.42□□□□□ -1.22
RPD3YNL330C PAU10Q03050 120 aa7.42□□□□□ -1.22
RPD3YNL330C DPB4Q04603 196 aaKnown RBP7.42□□□□□ -1.22
RPD3YNL330C PAU20Q08322 120 aa7.42□□□□□ -1.22
RPD3YNL330C PAU9Q3E770 120 aa7.42□□□□□ -1.22
RPD3YNL330C ATG40Q99325 256 aa7.42□□□□□ -1.22
RPD3YNL330C TY1A-HP0C2I4 478 aaKnown RBP7.41□□□□□ -1.22
RPD3YNL330C MCH2P36032 473 aa7.41□□□□□ -1.22
RPD3YNL330C YER079WP40052 210 aaKnown RBP7.41□□□□□ -1.22
RPD3YNL330C GET2P40056 285 aa7.41□□□□□ -1.22
RPD3YNL330C RTS2P40962 232 aa7.41□□□□□ -1.22
RPD3YNL330C ECO1P43605 281 aa7.41□□□□□ -1.22
RPD3YNL330C NRM1P53718 249 aa7.41□□□□□ -1.22
RPD3YNL330C MRPL19P53875 158 aa7.41□□□□□ -1.22
RPD3YNL330C COQ11Q05892 277 aa7.41□□□□□ -1.22
RPD3YNL330C PIN3Q06449 215 aa7.41□□□□□ -1.22
RPD3YNL330C MED7Q08278 222 aa7.41□□□□□ -1.22
RPD3YNL330C FLO9P39712 1322 aa7.41□□□□□ -1.22
RPD3YNL330C GLT1Q12680 2145 aaKnown RBP7.41□□□□□ -1.22
RPD3YNL330C SPO13P23624 291 aa7.4□□□□□ -1.22
RPD3YNL330C ELO2P25358 347 aa7.4□□□□□ -1.22
RPD3YNL330C AHT1P29589 182 aa7.4□□□□□ -1.22
RPD3YNL330C ALK2P32789 676 aaPredicted RBP7.4□□□□□ -1.22
RPD3YNL330C MGE1P38523 228 aa7.4□□□□□ -1.22
RPD3YNL330C HSP10P38910 106 aa7.4□□□□□ -1.22
RPD3YNL330C LSM4P40070 187 aaKnown RBP7.4□□□□□ -1.22
RPD3YNL330C ERV14P53173 138 aa7.4□□□□□ -1.22
RPD3YNL330C YOR292CQ08743 309 aa7.4□□□□□ -1.22
RPD3YNL330C CDC39P25655 2108 aaKnown RBP7.4□□□□□ -1.23
RPD3YNL330C PAU19P0CE85 124 aa7.39□□□□□ -1.23
RPD3YNL330C PAU21P0CE86 164 aa7.39□□□□□ -1.23
RPD3YNL330C PAU22P0CE87 164 aa7.39□□□□□ -1.23
RPD3YNL330C PAU3P25610 124 aa7.39□□□□□ -1.23
RPD3YNL330C ACP1P32463 125 aa7.39□□□□□ -1.23
RPD3YNL330C NOP16P40007 231 aaKnown RBP7.39□□□□□ -1.23
RPD3YNL330C YIL169CP40442 995 aa7.39□□□□□ -1.23
RPD3YNL330C RIB4P50861 169 aaPredicted RBP7.39□□□□□ -1.23
RPD3YNL330C YGL185CP53100 379 aa7.39□□□□□ -1.23
RPD3YNL330C YAP1802P53309 568 aa7.39□□□□□ -1.23
RPD3YNL330C SMM1P53720 384 aaKnown RBP7.39□□□□□ -1.23
RPD3YNL330C ELA1P53861 379 aaPredicted RBP7.39□□□□□ -1.23
RPD3YNL330C NUP53Q03790 475 aa7.39□□□□□ -1.23
RPD3YNL330C YAP6Q03935 383 aa7.39□□□□□ -1.23
RPD3YNL330C YDR391CQ04170 232 aa7.39□□□□□ -1.23
RPD3YNL330C YPR098CQ06089 161 aa7.39□□□□□ -1.23
RPD3YNL330C YFH1Q07540 174 aa7.39□□□□□ -1.23
RPD3YNL330C ATG5Q12380 294 aa7.39□□□□□ -1.23
RPD3YNL330C NHP6AP11632 93 aaKnown RBP7.38□□□□□ -1.23
RPD3YNL330C MSI1P13712 422 aa7.38□□□□□ -1.23
RPD3YNL330C QCR9P22289 66 aa7.38□□□□□ -1.23
RPD3YNL330C CDC50P25656 391 aa7.38□□□□□ -1.23
RPD3YNL330C IMP1P28627 190 aa7.38□□□□□ -1.23
RPD3YNL330C MRPL28P36527 147 aa7.38□□□□□ -1.23
RPD3YNL330C PRY1P47032 299 aa7.38□□□□□ -1.23
RPD3YNL330C TTI2P47168 421 aa7.38□□□□□ -1.23
RPD3YNL330C OCA2P53949 197 aa7.38□□□□□ -1.23
RPD3YNL330C CUE4Q04201 117 aaPredicted RBP7.38□□□□□ -1.23
RPD3YNL330C UPS1Q05776 175 aa7.38□□□□□ -1.23
RPD3YNL330C YDL180WQ12301 547 aa7.38□□□□□ -1.23
RPD3YNL330C MPD1Q12404 318 aaKnown RBP7.38□□□□□ -1.23
RPD3YNL330C RAX2Q12465 1220 aa7.38□□□□□ -1.23
RPD3YNL330C RPL7AP05737 244 aaKnown RBP7.37□□□□□ -1.23
RPD3YNL330C CBP6P07253 162 aaPredicted RBP7.37□□□□□ -1.23
RPD3YNL330C SHB17P36136 271 aaKnown RBP7.37□□□□□ -1.23
RPD3YNL330C UBS1P38290 277 aa7.37□□□□□ -1.23
RPD3YNL330C PAU5P43575 122 aa7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 93.1 ms