RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W MAK3Q03503 176 aa2.39□□□□□ -2.03
CAF120YNL278W TY1A-MR1Q04215 440 aa2.39□□□□□ -2.03
CAF120YNL278W YMR315WQ04869 349 aaKnown RBP2.39□□□□□ -2.03
CAF120YNL278W YLR179CQ06252 201 aaKnown RBP2.39□□□□□ -2.03
CAF120YNL278W LDS2Q08218 356 aa2.39□□□□□ -2.03
CAF120YNL278W COX1P00401 534 aa2.39□□□□□ -2.03
CAF120YNL278W CPA1P07258 411 aaKnown RBP2.39□□□□□ -2.03
CAF120YNL278W YLL053CP0CD98 152 aa2.39□□□□□ -2.03
CAF120YNL278W YOL162WP0CF19 215 aa2.39□□□□□ -2.03
CAF120YNL278W MRPL9P31334 269 aa2.39□□□□□ -2.03
CAF120YNL278W SFK1P35735 353 aa2.39□□□□□ -2.03
CAF120YNL278W CBP4P37267 147 aa2.39□□□□□ -2.03
CAF120YNL278W VEL1P53058 206 aa2.39□□□□□ -2.03
CAF120YNL278W DIG2Q03373 323 aaKnown RBP2.39□□□□□ -2.03
CAF120YNL278W TMA23Q03525 211 aa2.39□□□□□ -2.03
CAF120YNL278W FCF2Q12035 217 aaPredicted RBP2.39□□□□□ -2.03
CAF120YNL278W YPL245WQ12179 454 aaKnown RBP2.39□□□□□ -2.03
CAF120YNL278W RNH203Q12338 110 aa2.39□□□□□ -2.03
CAF120YNL278W YBR255C-AQ3E776 120 aa2.39□□□□□ -2.03
CAF120YNL278W YIL046W-AQ3E7Z4 54 aa2.39□□□□□ -2.03
CAF120YNL278W YBR085C-AO43137 85 aa2.39□□□□□ -2.03
CAF120YNL278W FCY2P17064 533 aa2.39□□□□□ -2.03
CAF120YNL278W CKS1P20486 150 aaKnown RBP2.39□□□□□ -2.03
CAF120YNL278W POF1P25576 258 aa2.39□□□□□ -2.03
CAF120YNL278W POP5P28005 173 aa2.39□□□□□ -2.03
CAF120YNL278W MRP49P32388 137 aa2.39□□□□□ -2.03
CAF120YNL278W CDC5P32562 705 aa2.39□□□□□ -2.03
CAF120YNL278W YKL097CP34245 136 aa2.39□□□□□ -2.03
CAF120YNL278W MIT1P40002 666 aa2.39□□□□□ -2.03
CAF120YNL278W MEP2P41948 499 aa2.39□□□□□ -2.03
CAF120YNL278W RPA43P46669 326 aa2.39□□□□□ -2.03
CAF120YNL278W IRC18P47056 224 aa2.39□□□□□ -2.03
CAF120YNL278W AVT4P50944 713 aa2.39□□□□□ -2.03
CAF120YNL278W UBC11P52492 156 aa2.39□□□□□ -2.03
CAF120YNL278W ERG25P53045 309 aa2.39□□□□□ -2.03
CAF120YNL278W CDH1P53197 566 aa2.39□□□□□ -2.03
CAF120YNL278W COX18P53239 316 aa2.39□□□□□ -2.03
CAF120YNL278W HCH1P53834 153 aa2.39□□□□□ -2.03
CAF120YNL278W CUZ1P53899 274 aa2.39□□□□□ -2.03
CAF120YNL278W TPP1Q03796 238 aa2.39□□□□□ -2.03
CAF120YNL278W SPG3Q04398 127 aaPredicted RBP2.39□□□□□ -2.03
CAF120YNL278W CTR3Q06686 241 aa2.39□□□□□ -2.03
CAF120YNL278W MED7Q08278 222 aa2.39□□□□□ -2.03
CAF120YNL278W FEX1Q08913 375 aa2.39□□□□□ -2.03
CAF120YNL278W TY1A-NL1Q12391 440 aaKnown RBP2.39□□□□□ -2.03
CAF120YNL278W LAS17Q12446 633 aa2.39□□□□□ -2.03
CAF120YNL278W RAX2Q12465 1220 aa2.39□□□□□ -2.03
CAF120YNL278W RPL31BP0C2H9 113 aaKnown RBP2.38□□□□□ -2.03
CAF120YNL278W CPR1P14832 162 aaKnown RBP2.38□□□□□ -2.03
CAF120YNL278W RNQ1P25367 405 aa2.38□□□□□ -2.03
CAF120YNL278W TOA2P32774 122 aa2.38□□□□□ -2.03
CAF120YNL278W KTI12P34253 313 aaKnown RBP2.38□□□□□ -2.03
CAF120YNL278W ERV15P38312 142 aa2.38□□□□□ -2.03
CAF120YNL278W LSM4P40070 187 aaKnown RBP2.38□□□□□ -2.03
CAF120YNL278W YPS6P40583 537 aa2.38□□□□□ -2.03
CAF120YNL278W GNA1P43577 159 aaPredicted RBP2.38□□□□□ -2.03
CAF120YNL278W BRR6P53062 197 aa2.38□□□□□ -2.03
CAF120YNL278W YPL108WQ02872 168 aaPredicted RBP2.38□□□□□ -2.03
CAF120YNL278W THI74Q04083 370 aa2.38□□□□□ -2.03
CAF120YNL278W YTH1Q06102 208 aaPredicted RBP2.38□□□□□ -2.03
CAF120YNL278W IZH3Q07959 543 aa2.38□□□□□ -2.03
CAF120YNL278W YOR387CQ08910 206 aa2.38□□□□□ -2.03
CAF120YNL278W ATX2Q12067 313 aa2.38□□□□□ -2.03
CAF120YNL278W FEN2P25621 512 aaKnown RBP2.38□□□□□ -2.03
CAF120YNL278W NUP2P32499 720 aa2.38□□□□□ -2.03
CAF120YNL278W SEC17P32602 292 aa2.38□□□□□ -2.03
CAF120YNL278W SWD2P36104 329 aaPredicted RBP2.38□□□□□ -2.03
CAF120YNL278W SHB17P36136 271 aaKnown RBP2.38□□□□□ -2.03
CAF120YNL278W QDR3P38227 689 aa2.38□□□□□ -2.03
CAF120YNL278W DOG2P38773 246 aa2.38□□□□□ -2.03
CAF120YNL278W BAT1P38891 393 aaKnown RBP2.38□□□□□ -2.03
CAF120YNL278W PEX7P39108 375 aa2.38□□□□□ -2.03
CAF120YNL278W PHO90P39535 881 aa2.38□□□□□ -2.03
CAF120YNL278W YIL060WP40519 144 aa2.38□□□□□ -2.03
CAF120YNL278W MIC26P50087 233 aa2.38□□□□□ -2.03
CAF120YNL278W ALG13P53178 202 aa2.38□□□□□ -2.03
CAF120YNL278W YDR209CQ03480 137 aa2.38□□□□□ -2.03
CAF120YNL278W CGI121Q03705 181 aaKnown RBP2.38□□□□□ -2.03
CAF120YNL278W RAV2Q03956 351 aa2.38□□□□□ -2.03
CAF120YNL278W HNT1Q04344 158 aaKnown RBP2.38□□□□□ -2.03
CAF120YNL278W ARC18Q05933 178 aaKnown RBP2.38□□□□□ -2.03
CAF120YNL278W TMA10Q06177 86 aa2.38□□□□□ -2.03
CAF120YNL278W YOL029CQ08187 201 aa2.38□□□□□ -2.03
CAF120YNL278W RAD28Q12021 506 aa2.38□□□□□ -2.03
CAF120YNL278W MDM32Q12171 622 aa2.38□□□□□ -2.03
CAF120YNL278W YCT1Q12235 531 aa2.38□□□□□ -2.03
CAF120YNL278W FRE7Q12333 620 aa2.38□□□□□ -2.03
CAF120YNL278W MDH2P22133 377 aa2.37□□□□□ -2.03
CAF120YNL278W ATG15P25641 520 aa2.37□□□□□ -2.03
CAF120YNL278W PPZ2P33329 710 aa2.37□□□□□ -2.03
CAF120YNL278W SRX1P36077 127 aa2.37□□□□□ -2.03
CAF120YNL278W PAN3P36102 679 aaPredicted RBP2.37□□□□□ -2.03
CAF120YNL278W YMR144WP40214 342 aaKnown RBP2.37□□□□□ -2.03
CAF120YNL278W AZF1P41696 914 aa2.37□□□□□ -2.03
CAF120YNL278W ATG27P46989 271 aa2.37□□□□□ -2.03
CAF120YNL278W PHO23P50947 330 aa2.37□□□□□ -2.03
CAF120YNL278W NCE101Q02820 53 aa2.37□□□□□ -2.03
CAF120YNL278W TSA2Q04120 196 aa2.37□□□□□ -2.03
CAF120YNL278W SEI1Q06058 285 aa2.37□□□□□ -2.03
CAF120YNL278W DIC1Q06143 298 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms