RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W MRPL17P36528 281 aa1.66□□□□□ -2.14
SRP1YNL189W DSE2P38844 325 aa1.66□□□□□ -2.14
SRP1YNL189W MTW1P39731 289 aa1.66□□□□□ -2.14
SRP1YNL189W SEC72P39742 193 aaKnown RBP1.66□□□□□ -2.14
SRP1YNL189W YER121WP40076 114 aa1.66□□□□□ -2.14
SRP1YNL189W TIR3P40552 269 aa1.66□□□□□ -2.14
SRP1YNL189W IRC18P47056 224 aa1.66□□□□□ -2.14
SRP1YNL189W YGR050CP53231 118 aa1.66□□□□□ -2.14
SRP1YNL189W BRX1Q08235 291 aaKnown RBP1.66□□□□□ -2.14
SRP1YNL189W GPM2Q12008 311 aa1.66□□□□□ -2.14
SRP1YNL189W YIL177CP40434 1758 aa1.65□□□□□ -2.15
SRP1YNL189W YJL225CP40889 1758 aa1.65□□□□□ -2.15
SRP1YNL189W TIM9O74700 87 aa1.65□□□□□ -2.15
SRP1YNL189W PTM1P32857 523 aa1.65□□□□□ -2.15
SRP1YNL189W YKR041WP36134 250 aa1.65□□□□□ -2.15
SRP1YNL189W MRPL28P36527 147 aa1.65□□□□□ -2.15
SRP1YNL189W ICE2P40499 491 aa1.65□□□□□ -2.15
SRP1YNL189W DOC1P53068 250 aa1.65□□□□□ -2.15
SRP1YNL189W SWP1Q02795 286 aa1.65□□□□□ -2.15
SRP1YNL189W SNO1Q03144 224 aa1.65□□□□□ -2.15
SRP1YNL189W ARO80Q04052 950 aa1.65□□□□□ -2.15
SRP1YNL189W SML1Q04964 104 aa1.65□□□□□ -2.15
SRP1YNL189W YOL160WQ08321 113 aa1.65□□□□□ -2.15
SRP1YNL189W YNG1Q08465 219 aa1.65□□□□□ -2.15
SRP1YNL189W YPL162CQ12042 273 aa1.65□□□□□ -2.15
SRP1YNL189W YFR032C-BQ8TGU2 87 aa1.65□□□□□ -2.15
SRP1YNL189W PDR18P53756 1333 aa1.65□□□□□ -2.15
SRP1YNL189W MDH2P22133 377 aa1.64□□□□□ -2.15
SRP1YNL189W MAK5P38112 773 aaPredicted RBP1.64□□□□□ -2.15
SRP1YNL189W POG1P40473 351 aa1.64□□□□□ -2.15
SRP1YNL189W MMS2P53152 137 aa1.64□□□□□ -2.15
SRP1YNL189W VPS51P36116 164 aa1.63□□□□□ -2.15
SRP1YNL189W YBR219CP38317 127 aa1.63□□□□□ -2.15
SRP1YNL189W SVP26P38869 228 aa1.63□□□□□ -2.15
SRP1YNL189W JAC1P53193 184 aa1.63□□□□□ -2.15
SRP1YNL189W YNL140CP53910 189 aa1.63□□□□□ -2.15
SRP1YNL189W MRS1P07266 363 aa1.62□□□□□ -2.15
SRP1YNL189W GCY1P14065 312 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
SRP1YNL189W MRPS28P21771 286 aa1.62□□□□□ -2.15
SRP1YNL189W RMD6P39975 231 aa1.62□□□□□ -2.15
SRP1YNL189W EAF6P47128 113 aa1.62□□□□□ -2.15
SRP1YNL189W UBC12P52491 188 aa1.62□□□□□ -2.15
SRP1YNL189W NRK1P53915 240 aa1.62□□□□□ -2.15
SRP1YNL189W FZF1P32805 299 aa1.62□□□□□ -2.15
SRP1YNL189W CLG1P35190 452 aa1.62□□□□□ -2.15
SRP1YNL189W FMP23P38231 175 aa1.62□□□□□ -2.15
SRP1YNL189W POP7P38291 140 aa1.62□□□□□ -2.15
SRP1YNL189W TRM5P38793 499 aa1.62□□□□□ -2.15
SRP1YNL189W AST2P39945 430 aaKnown RBP1.62□□□□□ -2.15
SRP1YNL189W YNL217WP40152 326 aa1.62□□□□□ -2.15
SRP1YNL189W LSM7P53905 115 aaKnown RBP1.62□□□□□ -2.15
SRP1YNL189W YLR460CP54007 376 aa1.62□□□□□ -2.15
SRP1YNL189W YDR249CQ03787 373 aa1.62□□□□□ -2.15
SRP1YNL189W SPC2Q04969 178 aa1.62□□□□□ -2.15
SRP1YNL189W GRX8Q05926 109 aa1.62□□□□□ -2.15
SRP1YNL189W FLO9P39712 1322 aa1.62□□□□□ -2.15
SRP1YNL189W CPA1P07258 411 aaKnown RBP1.61□□□□□ -2.15
SRP1YNL189W YCR090CP25654 182 aaKnown RBP1.61□□□□□ -2.15
SRP1YNL189W UBC6P33296 250 aaPredicted RBP1.61□□□□□ -2.15
SRP1YNL189W SKG1P36169 355 aa1.61□□□□□ -2.15
SRP1YNL189W AME1P38313 324 aa1.61□□□□□ -2.15
SRP1YNL189W AVT2P39981 480 aa1.61□□□□□ -2.15
SRP1YNL189W VTC1P40046 129 aaRIP-Chip data1.61□□□□□ -2.15not detected
SRP1YNL189W YMR315WQ04869 349 aaKnown RBP1.61□□□□□ -2.15
SRP1YNL189W NOC4Q06512 552 aaPredicted RBP1.61□□□□□ -2.15
SRP1YNL189W CSI2Q08054 341 aa1.61□□□□□ -2.15
SRP1YNL189W TSC3Q3E790 80 aa1.61□□□□□ -2.15
SRP1YNL189W QCR2P07257 368 aa1.6□□□□□ -2.15
SRP1YNL189W UMP1P38293 148 aa1.6□□□□□ -2.15
SRP1YNL189W SRP14P38985 146 aa1.6□□□□□ -2.15
SRP1YNL189W GIM4P40005 111 aaKnown RBP1.6□□□□□ -2.15
SRP1YNL189W GLE2P40066 365 aa1.6□□□□□ -2.15
SRP1YNL189W SOK1P40317 901 aa1.6□□□□□ -2.15
SRP1YNL189W GVP36P40531 326 aaKnown RBP1.6□□□□□ -2.15
SRP1YNL189W AIM25P47140 327 aa1.6□□□□□ -2.15
SRP1YNL189W YNL184CP53876 108 aa1.6□□□□□ -2.15
SRP1YNL189W RIO1Q12196 484 aaKnown RBP1.6□□□□□ -2.15
SRP1YNL189W ATP15P21306 62 aa1.59□□□□□ -2.15
SRP1YNL189W ARO7P32178 256 aa1.59□□□□□ -2.15
SRP1YNL189W YET1P35723 206 aa1.59□□□□□ -2.15
SRP1YNL189W YKR045CP36138 183 aa1.59□□□□□ -2.15
SRP1YNL189W FIG1P38224 298 aa1.59□□□□□ -2.15
SRP1YNL189W YAP3P38749 330 aa1.59□□□□□ -2.15
SRP1YNL189W GAA1P39012 614 aa1.59□□□□□ -2.15
SRP1YNL189W YER076CP40049 302 aa1.59□□□□□ -2.15
SRP1YNL189W YER135CP40082 130 aa1.59□□□□□ -2.15
SRP1YNL189W COG5P53951 403 aa1.59□□□□□ -2.15
SRP1YNL189W BUD25P85052 153 aa1.59□□□□□ -2.15
SRP1YNL189W YDR274CP87283 123 aa1.59□□□□□ -2.15
SRP1YNL189W YLR162WQ06235 118 aa1.59□□□□□ -2.15
SRP1YNL189W BET1P22804 142 aa1.58□□□□□ -2.16
SRP1YNL189W SRP102P36057 244 aaPredicted RBP1.58□□□□□ -2.16
SRP1YNL189W SHG1P38337 142 aa1.58□□□□□ -2.16
SRP1YNL189W TMA22P47089 198 aaPredicted RBP1.58□□□□□ -2.16
SRP1YNL189W YGL235WP53071 178 aa1.58□□□□□ -2.16
SRP1YNL189W RPS28BP0C0X0 67 aaKnown RBP1.58□□□□□ -2.16
SRP1YNL189W RPB3P16370 318 aaKnown RBP1.58□□□□□ -2.16
SRP1YNL189W CNB1P25296 175 aa1.58□□□□□ -2.16
SRP1YNL189W FES1P38260 290 aa1.58□□□□□ -2.16
SRP1YNL189W SBH2P52871 88 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms