RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C MPD1Q12404 318 aaKnown RBP1.67□□□□□ -2.14
VTI1YMR197C YPL247CQ12523 523 aa1.67□□□□□ -2.14
VTI1YMR197C CBP6P07253 162 aaPredicted RBP1.66□□□□□ -2.14
VTI1YMR197C SEN2P16658 377 aa1.66□□□□□ -2.14
VTI1YMR197C PET9P18239 318 aaKnown RBP1.66□□□□□ -2.14
VTI1YMR197C CKS1P20486 150 aaKnown RBP1.66□□□□□ -2.14
VTI1YMR197C PEX34P25584 144 aa1.66□□□□□ -2.14
VTI1YMR197C RCN1P36054 211 aa1.66□□□□□ -2.14
VTI1YMR197C UTP30P36144 274 aaKnown RBP1.66□□□□□ -2.14
VTI1YMR197C YGP1P38616 354 aaKnown RBP1.66□□□□□ -2.14
VTI1YMR197C COS8P38723 381 aa1.66□□□□□ -2.14
VTI1YMR197C IPI1P38803 334 aaPredicted RBP1.66□□□□□ -2.14
VTI1YMR197C AIM2P39721 246 aa1.66□□□□□ -2.14
VTI1YMR197C CIN5P40917 295 aa1.66□□□□□ -2.14
VTI1YMR197C PFS2P42841 465 aaKnown RBP1.66□□□□□ -2.14
VTI1YMR197C YGR201CP42936 225 aa1.66□□□□□ -2.14
VTI1YMR197C MNN5P46982 586 aa1.66□□□□□ -2.14
VTI1YMR197C PGU1P47180 361 aa1.66□□□□□ -2.14
VTI1YMR197C PGA1P53896 198 aa1.66□□□□□ -2.14
VTI1YMR197C YPR202WQ08993 238 aa1.66□□□□□ -2.14
VTI1YMR197C YLR046CQ12253 270 aa1.66□□□□□ -2.14
VTI1YMR197C PRR2Q12310 699 aa1.66□□□□□ -2.14
VTI1YMR197C TSC3Q3E790 80 aa1.66□□□□□ -2.14
VTI1YMR197C YFR032C-BQ8TGU2 87 aa1.66□□□□□ -2.14
VTI1YMR197C PDR18P53756 1333 aa1.66□□□□□ -2.14
VTI1YMR197C AUS1Q08409 1394 aa1.65□□□□□ -2.15
VTI1YMR197C NHP6AP11632 93 aaKnown RBP1.65□□□□□ -2.15
VTI1YMR197C URA5P13298 226 aaKnown RBP1.65□□□□□ -2.15
VTI1YMR197C RPB3P16370 318 aaKnown RBP1.65□□□□□ -2.15
VTI1YMR197C BET1P22804 142 aa1.65□□□□□ -2.15
VTI1YMR197C SPO13P23624 291 aa1.65□□□□□ -2.15
VTI1YMR197C SEC17P32602 292 aa1.65□□□□□ -2.15
VTI1YMR197C MED6P38782 295 aa1.65□□□□□ -2.15
VTI1YMR197C AVT2P39981 480 aa1.65□□□□□ -2.15
VTI1YMR197C YJR111CP47148 283 aaKnown RBP1.65□□□□□ -2.15
VTI1YMR197C RBL2P48606 106 aaKnown RBP1.65□□□□□ -2.15
VTI1YMR197C YGL101WP53144 215 aa1.65□□□□□ -2.15
VTI1YMR197C ALG9P53868 555 aaKnown RBP1.65□□□□□ -2.15
VTI1YMR197C HHT1P61830 136 aa1.65□□□□□ -2.15
VTI1YMR197C YDR249CQ03787 373 aa1.65□□□□□ -2.15
VTI1YMR197C ATG39Q06159 398 aa1.65□□□□□ -2.15
VTI1YMR197C YOR342CQ12182 319 aa1.65□□□□□ -2.15
VTI1YMR197C GEP5Q12393 293 aa1.65□□□□□ -2.15
VTI1YMR197C PRM7Q12459 698 aa1.65□□□□□ -2.15
VTI1YMR197C YOL085CQ99345 113 aa1.65□□□□□ -2.15
VTI1YMR197C ECM5Q03214 1411 aa1.65□□□□□ -2.15
VTI1YMR197C RPS19AP07280 144 aaKnown RBP1.64□□□□□ -2.15
VTI1YMR197C RPS19BP07281 144 aaPredicted RBP1.64□□□□□ -2.15
VTI1YMR197C YLR156WP0CE96 114 aa1.64□□□□□ -2.15
VTI1YMR197C YLR159WP0CE97 114 aa1.64□□□□□ -2.15
VTI1YMR197C YLR161WP0CE98 114 aa1.64□□□□□ -2.15
VTI1YMR197C UBI4P0CG63 381 aaKnown RBP1.64□□□□□ -2.15
VTI1YMR197C RPL2AP0CX45 254 aaKnown RBP1.64□□□□□ -2.15
VTI1YMR197C RPL2BP0CX46 254 aaKnown RBP1.64□□□□□ -2.15
VTI1YMR197C MRPS28P21771 286 aa1.64□□□□□ -2.15
VTI1YMR197C TOM40P23644 387 aaKnown RBP1.64□□□□□ -2.15
VTI1YMR197C FMP23P38231 175 aa1.64□□□□□ -2.15
VTI1YMR197C YEA4P40004 342 aa1.64□□□□□ -2.15
VTI1YMR197C RFC2P40348 353 aa1.64□□□□□ -2.15
VTI1YMR197C APQ12P40532 138 aa1.64□□□□□ -2.15
VTI1YMR197C SKI6P46948 246 aaPredicted RBP1.64□□□□□ -2.15
VTI1YMR197C OST2P46964 130 aa1.64□□□□□ -2.15
VTI1YMR197C GPI14P47088 403 aaKnown RBP1.64□□□□□ -2.15
VTI1YMR197C YJR015WP47090 510 aa1.64□□□□□ -2.15
VTI1YMR197C XPT1P47165 209 aa1.64□□□□□ -2.15
VTI1YMR197C VMA10P48836 114 aaKnown RBP1.64□□□□□ -2.15
VTI1YMR197C YGL088WP53151 121 aa1.64□□□□□ -2.15
VTI1YMR197C LSM3P57743 89 aaKnown RBP1.64□□□□□ -2.15
VTI1YMR197C SMD1Q02260 146 aaPredicted RBP1.64□□□□□ -2.15
VTI1YMR197C CSN9Q03981 162 aa1.64□□□□□ -2.15
VTI1YMR197C TRM12Q04235 462 aa1.64□□□□□ -2.15
VTI1YMR197C MRX8Q05473 314 aa1.64□□□□□ -2.15
VTI1YMR197C RFU1Q08003 200 aa1.64□□□□□ -2.15
VTI1YMR197C IES3Q12345 250 aa1.64□□□□□ -2.15
VTI1YMR197C YLR361C-AQ3E795 98 aa1.64□□□□□ -2.15
VTI1YMR197C CDC8P00572 216 aa1.63□□□□□ -2.15
VTI1YMR197C Q0255P03881 472 aa1.63□□□□□ -2.15
VTI1YMR197C RPL9AP05738 191 aaKnown RBP1.63□□□□□ -2.15
VTI1YMR197C SGA1P08019 549 aa1.63□□□□□ -2.15
VTI1YMR197C CCA1P21269 546 aa1.63□□□□□ -2.15
VTI1YMR197C SUA7P29055 345 aaPredicted RBP1.63□□□□□ -2.15
VTI1YMR197C SFK1P35735 353 aa1.63□□□□□ -2.15
VTI1YMR197C YHR125WP38831 101 aa1.63□□□□□ -2.15
VTI1YMR197C NSG1P38837 291 aa1.63□□□□□ -2.15
VTI1YMR197C ARC15P40518 154 aaRIP-Chip data1.63□□□□□ -2.15not detected
VTI1YMR197C PHB1P40961 287 aa1.63□□□□□ -2.15
VTI1YMR197C SER2P42941 309 aa1.63□□□□□ -2.15
VTI1YMR197C BUD13P46947 266 aaPredicted RBP1.63□□□□□ -2.15
VTI1YMR197C TDA4P47153 279 aa1.63□□□□□ -2.15
VTI1YMR197C RPL9BP51401 191 aaKnown RBP1.63□□□□□ -2.15
VTI1YMR197C UBC7Q02159 165 aa1.63□□□□□ -2.15
VTI1YMR197C DYN2Q02647 92 aa1.63□□□□□ -2.15
VTI1YMR197C THI74Q04083 370 aa1.63□□□□□ -2.15
VTI1YMR197C SPC24Q04477 213 aa1.63□□□□□ -2.15
VTI1YMR197C MCP1Q12106 302 aa1.63□□□□□ -2.15
VTI1YMR197C YDL180WQ12301 547 aa1.63□□□□□ -2.15
VTI1YMR197C PST2Q12335 198 aaKnown RBP1.63□□□□□ -2.15
VTI1YMR197C REP2P03872 296 aa1.62□□□□□ -2.15
VTI1YMR197C RAD10P06838 210 aa1.62□□□□□ -2.15
VTI1YMR197C RPL30P14120 105 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms