RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	QRI5	P32344	111 aa		0.59	□□□□□ -2.31
UBC7	YMR022W	RRF1	P38771	230 aa		0.59	□□□□□ -2.31
UBC7	YMR022W	YHR180W	P38868	163 aa		0.59	□□□□□ -2.31
UBC7	YMR022W	HMF1	P40037	129 aa	Known RBP	0.59	□□□□□ -2.31
UBC7	YMR022W	HUA1	P40325	198 aa		0.59	□□□□□ -2.31
UBC7	YMR022W	SNZ3	P43545	298 aa		0.59	□□□□□ -2.31
UBC7	YMR022W	GCD14	P46959	383 aa	Predicted RBP	0.59	□□□□□ -2.31
UBC7	YMR022W	MPA43	P53583	542 aa	Predicted RBP	0.59	□□□□□ -2.31
UBC7	YMR022W	ALG11	P53954	548 aa	Known RBP	0.59	□□□□□ -2.31
UBC7	YMR022W	OST6	Q03723	332 aa		0.59	□□□□□ -2.31
UBC7	YMR022W	SPG4	Q04438	115 aa		0.59	□□□□□ -2.31
UBC7	YMR022W	YPR172W	Q06608	200 aa		0.59	□□□□□ -2.31
UBC7	YMR022W	YCT1	Q12235	531 aa		0.59	□□□□□ -2.31
UBC7	YMR022W	COQ1	P18900	473 aa		0.58	□□□□□ -2.32
UBC7	YMR022W	KRR1	P25586	316 aa	Predicted RBP	0.58	□□□□□ -2.32
UBC7	YMR022W	TAF14	P35189	244 aa		0.58	□□□□□ -2.32
UBC7	YMR022W	YPT52	P36018	234 aa	Known RBP	0.58	□□□□□ -2.32
UBC7	YMR022W	JEN1	P36035	616 aa		0.58	□□□□□ -2.32
UBC7	YMR022W	THO1	P40040	218 aa	Known RBP	0.58	□□□□□ -2.32
UBC7	YMR022W	YNL217W	P40152	326 aa		0.58	□□□□□ -2.32
UBC7	YMR022W	RSM25	P40496	264 aa		0.58	□□□□□ -2.32
UBC7	YMR022W	FMP33	P46998	180 aa		0.58	□□□□□ -2.32
UBC7	YMR022W	EMC2	P47133	292 aa	Known RBP	0.58	□□□□□ -2.32
UBC7	YMR022W	GPI8	P49018	411 aa		0.58	□□□□□ -2.32
UBC7	YMR022W	YGL034C	P53186	121 aa		0.58	□□□□□ -2.32
UBC7	YMR022W	UBC7	Q02159	165 aa		0.58	□□□□□ -2.32
UBC7	YMR022W	YOR342C	Q12182	319 aa		0.58	□□□□□ -2.32
UBC7	YMR022W	Q0297	Q9ZZV8	51 aa		0.58	□□□□□ -2.32
UBC7	YMR022W	RPL24A	P04449	155 aa	Known RBP	0.57	□□□□□ -2.32
UBC7	YMR022W	OM45	P16547	393 aa		0.57	□□□□□ -2.32
UBC7	YMR022W	DAL80	P26343	269 aa		0.57	□□□□□ -2.32
UBC7	YMR022W	FZF1	P32805	299 aa		0.57	□□□□□ -2.32
UBC7	YMR022W	RIO2	P40160	425 aa	Known RBP	0.57	□□□□□ -2.32
UBC7	YMR022W	PGD1	P40356	397 aa		0.57	□□□□□ -2.32
UBC7	YMR022W	ICE2	P40499	491 aa		0.57	□□□□□ -2.32
UBC7	YMR022W	YOR186W	Q08560	144 aa		0.57	□□□□□ -2.32
UBC7	YMR022W	SNU23	Q12368	194 aa	Predicted RBP	0.57	□□□□□ -2.32
UBC7	YMR022W	FCY2	P17064	533 aa		0.56	□□□□□ -2.32
UBC7	YMR022W	PRS2	P38620	318 aa	Known RBP	0.56	□□□□□ -2.32
UBC7	YMR022W	YML108W	Q03759	105 aa		0.56	□□□□□ -2.32
UBC7	YMR022W	AIM36	Q03798	255 aa		0.56	□□□□□ -2.32
UBC7	YMR022W	YDL180W	Q12301	547 aa		0.56	□□□□□ -2.32
UBC7	YMR022W	PDR18	P53756	1333 aa		0.56	□□□□□ -2.32
UBC7	YMR022W	CDC8	P00572	216 aa		0.55	□□□□□ -2.32
UBC7	YMR022W	MEI4	P29467	408 aa		0.55	□□□□□ -2.32
UBC7	YMR022W	SNZ2	P53824	298 aa		0.55	□□□□□ -2.32
UBC7	YMR022W	RHO3	Q00245	231 aa	Known RBP	0.55	□□□□□ -2.32
UBC7	YMR022W	GRX8	Q05926	109 aa		0.55	□□□□□ -2.32
UBC7	YMR022W	ANT1	Q06497	328 aa		0.55	□□□□□ -2.32
UBC7	YMR022W	COQ10	Q08058	207 aa		0.55	□□□□□ -2.32
UBC7	YMR022W	RAD50	P12753	1312 aa		0.55	□□□□□ -2.32
UBC7	YMR022W	BCY1	P07278	416 aa	Known RBP	0.54	□□□□□ -2.32
UBC7	YMR022W	POL30	P15873	258 aa	Known RBP	0.54	□□□□□ -2.32
UBC7	YMR022W	MRPS28	P21771	286 aa		0.54	□□□□□ -2.32
UBC7	YMR022W	TFC1	P32367	649 aa		0.54	□□□□□ -2.32
UBC7	YMR022W	MRPL37	P36532	105 aa		0.54	□□□□□ -2.32
UBC7	YMR022W	YBR063C	P38083	404 aa		0.54	□□□□□ -2.32
UBC7	YMR022W	RPF1	P38805	295 aa	Known RBP	0.54	□□□□□ -2.32
UBC7	YMR022W	YER076C	P40049	302 aa		0.54	□□□□□ -2.32
UBC7	YMR022W	RPC17	P47076	161 aa		0.54	□□□□□ -2.32
UBC7	YMR022W	USE1	P53146	245 aa		0.54	□□□□□ -2.32
UBC7	YMR022W	ABF2	Q02486	183 aa		0.54	□□□□□ -2.32
UBC7	YMR022W	VPS71	Q03433	280 aa		0.54	□□□□□ -2.32
UBC7	YMR022W	SIP3	P38717	1229 aa		0.53	□□□□□ -2.32
UBC7	YMR022W	YMD8	Q03697	442 aa		0.53	□□□□□ -2.32
UBC7	YMR022W	NIP7	Q08962	181 aa	Known RBP	0.53	□□□□□ -2.32
UBC7	YMR022W	SLH1	P53327	1967 aa	Known RBP	0.53	□□□□□ -2.32
UBC7	YMR022W	RSR1	P13856	272 aa		0.52	□□□□□ -2.33
UBC7	YMR022W	RNA15	P25299	296 aa	Predicted RBP	0.52	□□□□□ -2.33
UBC7	YMR022W	YET1	P35723	206 aa		0.52	□□□□□ -2.33
UBC7	YMR022W	BIG1	P38813	335 aa		0.52	□□□□□ -2.33
UBC7	YMR022W	PET100	P38958	111 aa		0.52	□□□□□ -2.33
UBC7	YMR022W	YMR144W	P40214	342 aa	Known RBP	0.52	□□□□□ -2.33
UBC7	YMR022W	PRE6	P40303	254 aa	Known RBP	0.52	□□□□□ -2.33
UBC7	YMR022W	AIF1	P52923	378 aa		0.52	□□□□□ -2.33
UBC7	YMR022W	BOL2	P53082	120 aa		0.52	□□□□□ -2.33
UBC7	YMR022W	BTS1	Q12051	335 aa		0.52	□□□□□ -2.33
UBC7	YMR022W	YNL146C-A	Q3E7Z1	64 aa		0.52	□□□□□ -2.33
UBC7	YMR022W	RPL27B	P0C2H7	136 aa	Known RBP	0.51	□□□□□ -2.33
UBC7	YMR022W	UBR1	P19812	1950 aa		0.51	□□□□□ -2.33
UBC7	YMR022W	DBP3	P20447	523 aa	Known RBP	0.51	□□□□□ -2.33
UBC7	YMR022W	HOM6	P31116	359 aa	Known RBP	0.51	□□□□□ -2.33
UBC7	YMR022W	ECM33	P38248	429 aa	Known RBP	0.51	□□□□□ -2.33
UBC7	YMR022W	GOS1	P38736	223 aa		0.51	□□□□□ -2.33
UBC7	YMR022W	YHR127W	P38833	243 aa	Known RBP	0.51	□□□□□ -2.33
UBC7	YMR022W	GAA1	P39012	614 aa		0.51	□□□□□ -2.33
UBC7	YMR022W	SMB1	P40018	196 aa	Known RBP	0.51	□□□□□ -2.33
UBC7	YMR022W	TRM9	P49957	279 aa		0.51	□□□□□ -2.33
UBC7	YMR022W	ERV25	P54837	211 aa	Known RBP	0.51	□□□□□ -2.33
UBC7	YMR022W	CWC21	Q03375	135 aa	Known RBP	0.51	□□□□□ -2.33
UBC7	YMR022W	COX20	Q04935	205 aa		0.51	□□□□□ -2.33
UBC7	YMR022W	ATG10	Q07879	167 aa		0.51	□□□□□ -2.33
UBC7	YMR022W	GPM2	Q12008	311 aa		0.51	□□□□□ -2.33
UBC7	YMR022W	YGR035W-A	Q45U48	73 aa		0.51	□□□□□ -2.33
UBC7	YMR022W	MRPL15	P36523	253 aa		0.5	□□□□□ -2.33
UBC7	YMR022W	RTT105	P40063	208 aa		0.5	□□□□□ -2.33
UBC7	YMR022W	SOK1	P40317	901 aa		0.5	□□□□□ -2.33
UBC7	YMR022W	GAT4	P40569	121 aa		0.5	□□□□□ -2.33
UBC7	YMR022W	ERJ5	P43613	295 aa	Predicted RBP	0.5	□□□□□ -2.33
UBC7	YMR022W	MRPL50	P53724	139 aa		0.5	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 77.6 ms