RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W YHL042WP38729 150 aa0.7□□□□□ -2.3
BER1YLR412W YGR050CP53231 118 aa0.7□□□□□ -2.3
BER1YLR412W YNL247WP53852 767 aaKnown RBP0.7□□□□□ -2.3
BER1YLR412W CWC27Q02770 301 aa0.7□□□□□ -2.3
BER1YLR412W ATP15P21306 62 aa0.69□□□□□ -2.3
BER1YLR412W MGM101P32787 269 aaKnown RBP0.69□□□□□ -2.3
BER1YLR412W PTM1P32857 523 aa0.69□□□□□ -2.3
BER1YLR412W YER085CP40058 173 aa0.69□□□□□ -2.3
BER1YLR412W AIM36Q03798 255 aa0.69□□□□□ -2.3
BER1YLR412W RPB3P16370 318 aaKnown RBP0.68□□□□□ -2.3
BER1YLR412W RPL24BP24000 155 aaKnown RBP0.68□□□□□ -2.3
BER1YLR412W YPL073CP40323 161 aa0.68□□□□□ -2.3
BER1YLR412W HYR1P40581 163 aaKnown RBP0.68□□□□□ -2.3
BER1YLR412W YOL160WQ08321 113 aa0.68□□□□□ -2.3
BER1YLR412W SEC4P07560 215 aaKnown RBP0.67□□□□□ -2.3
BER1YLR412W GCN3P14741 305 aa0.67□□□□□ -2.3
BER1YLR412W YER034WP40022 185 aaKnown RBP0.67□□□□□ -2.3
BER1YLR412W PET191Q02772 108 aa0.67□□□□□ -2.3
BER1YLR412W SLH1P53327 1967 aaKnown RBP0.66□□□□□ -2.3
BER1YLR412W MDM35O60200 86 aa0.66□□□□□ -2.3
BER1YLR412W TVP23P38962 199 aa0.66□□□□□ -2.3
BER1YLR412W YPR174CQ06616 221 aaPredicted RBP0.66□□□□□ -2.3
BER1YLR412W YRA1Q12159 226 aaKnown RBP0.66□□□□□ -2.3
BER1YLR412W PPA2P28239 310 aa0.65□□□□□ -2.31
BER1YLR412W PRX1P34227 261 aaKnown RBP0.65□□□□□ -2.31
BER1YLR412W RTC3P38804 111 aaPredicted RBP0.65□□□□□ -2.31
BER1YLR412W YFH7P43591 353 aa0.65□□□□□ -2.31
BER1YLR412W MPC3P53311 146 aa0.65□□□□□ -2.31
BER1YLR412W PDR17P53844 350 aa0.65□□□□□ -2.31
BER1YLR412W YIL177CP40434 1758 aa0.65□□□□□ -2.31
BER1YLR412W YJL225CP40889 1758 aa0.65□□□□□ -2.31
BER1YLR412W YBR121C-AP0C5L4 52 aa0.64□□□□□ -2.31
BER1YLR412W CKS1P20486 150 aaKnown RBP0.64□□□□□ -2.31
BER1YLR412W SPO13P23624 291 aa0.64□□□□□ -2.31
BER1YLR412W ADO1P47143 340 aaKnown RBP0.64□□□□□ -2.31
BER1YLR412W MGA1P53050 456 aa0.64□□□□□ -2.31
BER1YLR412W YMR252CQ04814 134 aa0.64□□□□□ -2.31
BER1YLR412W JLP1Q12358 412 aa0.64□□□□□ -2.31
BER1YLR412W YKL183C-AQ3E765 70 aa0.64□□□□□ -2.31
BER1YLR412W SEY1Q99287 776 aa0.64□□□□□ -2.31
BER1YLR412W RPL25P04456 142 aaKnown RBP0.63□□□□□ -2.31
BER1YLR412W YCL042WP25572 119 aa0.63□□□□□ -2.31
BER1YLR412W COG5P53951 403 aa0.63□□□□□ -2.31
BER1YLR412W YNG1Q08465 219 aa0.63□□□□□ -2.31
BER1YLR412W POR1P04840 283 aaKnown RBP0.62□□□□□ -2.31
BER1YLR412W ERG28P40030 148 aa0.62□□□□□ -2.31
BER1YLR412W LSM7P53905 115 aaKnown RBP0.62□□□□□ -2.31
BER1YLR412W DGA1Q08650 418 aa0.62□□□□□ -2.31
BER1YLR412W MAG1P22134 296 aaKnown RBP0.61□□□□□ -2.31
BER1YLR412W YEL008WP40001 126 aa0.61□□□□□ -2.31
BER1YLR412W YNL194CP40169 301 aa0.61□□□□□ -2.31
BER1YLR412W IRC18P47056 224 aa0.61□□□□□ -2.31
BER1YLR412W HNT1Q04344 158 aaKnown RBP0.61□□□□□ -2.31
BER1YLR412W ODC2Q99297 307 aa0.61□□□□□ -2.31
BER1YLR412W IKI3Q06706 1349 aaKnown RBP0.61□□□□□ -2.31
BER1YLR412W YDR157WA0A023PZE8 133 aa0.6□□□□□ -2.31
BER1YLR412W MER1P16523 270 aa0.6□□□□□ -2.31
BER1YLR412W CBT1P36038 271 aaPredicted RBP0.6□□□□□ -2.31
BER1YLR412W ECM4P36156 370 aa0.6□□□□□ -2.31
BER1YLR412W YHL018WP38744 120 aaPredicted RBP0.6□□□□□ -2.31
BER1YLR412W NHP6BP11633 99 aaKnown RBP0.59□□□□□ -2.31
BER1YLR412W HPA3P39979 161 aa0.59□□□□□ -2.31
BER1YLR412W RTR1P40084 226 aaPredicted RBP0.59□□□□□ -2.31
BER1YLR412W YRB1P41920 201 aaKnown RBP0.59□□□□□ -2.31
BER1YLR412W GET1P53192 235 aa0.59□□□□□ -2.31
BER1YLR412W LCL2Q08045 131 aa0.59□□□□□ -2.31
BER1YLR412W MDM32Q12171 622 aa0.59□□□□□ -2.31
BER1YLR412W STP22P25604 385 aa0.58□□□□□ -2.32
BER1YLR412W SPS18P32572 300 aa0.58□□□□□ -2.32
BER1YLR412W BMH2P34730 273 aaKnown RBP0.58□□□□□ -2.32
BER1YLR412W PAN3P36102 679 aaPredicted RBP0.58□□□□□ -2.32
BER1YLR412W TRM5P38793 499 aa0.58□□□□□ -2.32
BER1YLR412W HMF1P40037 129 aaKnown RBP0.58□□□□□ -2.32
BER1YLR412W RAD17P48581 401 aa0.58□□□□□ -2.32
BER1YLR412W YLR460CP54007 376 aa0.58□□□□□ -2.32
BER1YLR412W DAD4P69851 72 aa0.58□□□□□ -2.32
BER1YLR412W DIG2Q03373 323 aaKnown RBP0.58□□□□□ -2.32
BER1YLR412W FIT2Q08906 153 aa0.58□□□□□ -2.32
BER1YLR412W CDC36P06100 191 aaPredicted RBP0.57□□□□□ -2.32
BER1YLR412W STE18P18852 110 aa0.57□□□□□ -2.32
BER1YLR412W OCH1P31755 480 aa0.57□□□□□ -2.32
BER1YLR412W ERG10P41338 398 aaKnown RBP0.57□□□□□ -2.32
BER1YLR412W OTU1P43558 301 aa0.57□□□□□ -2.32
BER1YLR412W RNH202Q05635 350 aa0.57□□□□□ -2.32
BER1YLR412W PRP11Q07350 266 aaPredicted RBP0.57□□□□□ -2.32
BER1YLR412W IRC23Q08416 157 aa0.57□□□□□ -2.32
BER1YLR412W COA3Q3E7B2 85 aa0.57□□□□□ -2.32
BER1YLR412W COX8P04039 78 aa0.56□□□□□ -2.32
BER1YLR412W YCR090CP25654 182 aaKnown RBP0.56□□□□□ -2.32
BER1YLR412W PRP18P33411 251 aaPredicted RBP0.56□□□□□ -2.32
BER1YLR412W RPB7P34087 171 aa0.56□□□□□ -2.32
BER1YLR412W AIM25P47140 327 aa0.56□□□□□ -2.32
BER1YLR412W CWC23P52868 283 aaPredicted RBP0.56□□□□□ -2.32
BER1YLR412W YEA4P40004 342 aa0.55□□□□□ -2.32
BER1YLR412W YMR099CQ03161 297 aaKnown RBP0.55□□□□□ -2.32
BER1YLR412W FAS1P07149 2051 aaKnown RBP0.55□□□□□ -2.32
BER1YLR412W CDC33P07260 213 aaKnown RBP0.54□□□□□ -2.32
BER1YLR412W COQ1P18900 473 aa0.54□□□□□ -2.32
BER1YLR412W YCR087C-AP37263 153 aa0.54□□□□□ -2.32
BER1YLR412W UPS3Q04006 179 aa0.54□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms