RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	SOP4	P39543	234 aa	Predicted RBP	3.22	□□□□□ -1.89
SKG1	YKR100C	NAS2	P40555	220 aa		3.22	□□□□□ -1.89
SKG1	YKR100C	SMD1	Q02260	146 aa	Predicted RBP	3.22	□□□□□ -1.89
SKG1	YKR100C	MIX17	Q03667	156 aa		3.22	□□□□□ -1.89
SKG1	YKR100C	CMD1	P06787	147 aa	Known RBP	3.21	□□□□□ -1.9
SKG1	YKR100C	CPT1	P17898	393 aa		3.21	□□□□□ -1.9
SKG1	YKR100C	JEN1	P36035	616 aa		3.21	□□□□□ -1.9
SKG1	YKR100C	DAD2	P36162	133 aa		3.21	□□□□□ -1.9
SKG1	YKR100C	SKG1	P36169	355 aa		3.21	□□□□□ -1.9
SKG1	YKR100C	YBR063C	P38083	404 aa		3.21	□□□□□ -1.9
SKG1	YKR100C	GCN20	P43535	752 aa	Known RBP	3.21	□□□□□ -1.9
SKG1	YKR100C	YPL067C	Q02754	198 aa		3.21	□□□□□ -1.9
SKG1	YKR100C	YLR283W	Q05867	314 aa		3.21	□□□□□ -1.9
SKG1	YKR100C	AIM45	Q12480	344 aa	Known RBP	3.21	□□□□□ -1.9
SKG1	YKR100C	REP2	P03872	296 aa		3.2	□□□□□ -1.9
SKG1	YKR100C	MSW1	P04803	379 aa		3.2	□□□□□ -1.9
SKG1	YKR100C	KRR1	P25586	316 aa	Predicted RBP	3.2	□□□□□ -1.9
SKG1	YKR100C	TMA19	P35691	167 aa	Known RBP	3.2	□□□□□ -1.9
SKG1	YKR100C	YKL071W	P36086	256 aa		3.2	□□□□□ -1.9
SKG1	YKR100C	POP2	P39008	433 aa		3.2	□□□□□ -1.9
SKG1	YKR100C	YJL218W	P40892	196 aa	Known RBP	3.2	□□□□□ -1.9
SKG1	YKR100C	SMP3	Q04174	516 aa		3.2	□□□□□ -1.9
SKG1	YKR100C	YLR126C	Q12288	251 aa		3.2	□□□□□ -1.9
SKG1	YKR100C	BBP1	Q12365	385 aa		3.2	□□□□□ -1.9
SKG1	YKR100C	TFB5	Q3E7C1	72 aa	Predicted RBP	3.2	□□□□□ -1.9
SKG1	YKR100C	LOH1	P47055	219 aa		3.19	□□□□□ -1.9
SKG1	YKR100C	ECM18	Q04623	453 aa		3.19	□□□□□ -1.9
SKG1	YKR100C	TAR1	Q8TGM6	124 aa		3.19	□□□□□ -1.9
SKG1	YKR100C	YER137C	P40083	148 aa	Known RBP	3.18	□□□□□ -1.9
SKG1	YKR100C	HYR1	P40581	163 aa	Known RBP	3.18	□□□□□ -1.9
SKG1	YKR100C	GPI8	P49018	411 aa		3.18	□□□□□ -1.9
SKG1	YKR100C	YMR209C	Q03648	457 aa		3.18	□□□□□ -1.9
SKG1	YKR100C	NNT1	Q05874	261 aa		3.18	□□□□□ -1.9
SKG1	YKR100C	ECM19	Q06011	112 aa		3.18	□□□□□ -1.9
SKG1	YKR100C	DBP9	Q06218	594 aa	Known RBP	3.18	□□□□□ -1.9
SKG1	YKR100C	DFM1	Q12743	341 aa	Known RBP	3.18	□□□□□ -1.9
SKG1	YKR100C	RPL30	P14120	105 aa	Known RBP	3.17	□□□□□ -1.9
SKG1	YKR100C	DOA4	P32571	926 aa		3.17	□□□□□ -1.9
SKG1	YKR100C	GDT1	P38301	280 aa	Predicted RBP	3.17	□□□□□ -1.9
SKG1	YKR100C	RRG9	P40156	214 aa		3.17	□□□□□ -1.9
SKG1	YKR100C	AGX1	P43567	385 aa		3.17	□□□□□ -1.9
SKG1	YKR100C	YNR062C	P53748	327 aa		3.17	□□□□□ -1.9
SKG1	YKR100C	BNA7	Q04066	261 aa		3.17	□□□□□ -1.9
SKG1	YKR100C	YPR127W	Q06494	345 aa		3.17	□□□□□ -1.9
SKG1	YKR100C	VPS63	O13549	108 aa		3.16	□□□□□ -1.9
SKG1	YKR100C	STF1	P01098	86 aa		3.16	□□□□□ -1.9
SKG1	YKR100C	PHO13	P19881	312 aa		3.16	□□□□□ -1.9
SKG1	YKR100C	TCD1	P38756	429 aa		3.16	□□□□□ -1.9
SKG1	YKR100C	BAT2	P47176	376 aa	Known RBP	3.16	□□□□□ -1.9
SKG1	YKR100C	RPN6	Q12377	434 aa		3.16	□□□□□ -1.9
SKG1	YKR100C	BUB2	P26448	306 aa	Predicted RBP	3.15	□□□□□ -1.91
SKG1	YKR100C	YEL043W	P32618	956 aa		3.15	□□□□□ -1.91
SKG1	YKR100C	YCH1	P42937	148 aa		3.15	□□□□□ -1.91
SKG1	YKR100C	HIT1	P46973	164 aa		3.15	□□□□□ -1.91
SKG1	YKR100C	ALG13	P53178	202 aa		3.15	□□□□□ -1.91
SKG1	YKR100C	CDC8	P00572	216 aa		3.14	□□□□□ -1.91
SKG1	YKR100C	BIG1	P38813	335 aa		3.14	□□□□□ -1.91
SKG1	YKR100C	OKP1	P53298	406 aa		3.14	□□□□□ -1.91
SKG1	YKR100C	YET3	Q07451	203 aa		3.14	□□□□□ -1.91
SKG1	YKR100C	CBF1	P17106	351 aa		3.13	□□□□□ -1.91
SKG1	YKR100C	SWD2	P36104	329 aa	Predicted RBP	3.13	□□□□□ -1.91
SKG1	YKR100C	PPQ1	P32945	549 aa		3.12	□□□□□ -1.91
SKG1	YKR100C	CAF4	P36130	643 aa		3.12	□□□□□ -1.91
SKG1	YKR100C	RPA34	P47006	233 aa	Predicted RBP	3.12	□□□□□ -1.91
SKG1	YKR100C	YGL235W	P53071	178 aa		3.12	□□□□□ -1.91
SKG1	YKR100C	CAX4	P53223	239 aa		3.12	□□□□□ -1.91
SKG1	YKR100C	SGF11	Q03067	99 aa		3.12	□□□□□ -1.91
SKG1	YKR100C	YDR010C	Q12426	110 aa		3.12	□□□□□ -1.91
SKG1	YKR100C	SNF8	Q12483	233 aa		3.12	□□□□□ -1.91
SKG1	YKR100C	TAL1	P15019	335 aa	Known RBP	3.11	□□□□□ -1.91
SKG1	YKR100C	MER1	P16523	270 aa		3.11	□□□□□ -1.91
SKG1	YKR100C	SNF6	P18888	332 aa		3.11	□□□□□ -1.91
SKG1	YKR100C	ETR1	P38071	380 aa		3.11	□□□□□ -1.91
SKG1	YKR100C	MRH4	P53166	561 aa		3.11	□□□□□ -1.91
SKG1	YKR100C	FMP48	P53233	369 aa		3.11	□□□□□ -1.91
SKG1	YKR100C	SLM2	P53955	656 aa		3.11	□□□□□ -1.91
SKG1	YKR100C	MHF2	Q3E829	80 aa		3.11	□□□□□ -1.91
SKG1	YKR100C	SMB1	P40018	196 aa	Known RBP	3.1	□□□□□ -1.91
SKG1	YKR100C	COX15	P40086	486 aa		3.1	□□□□□ -1.91
SKG1	YKR100C	YNL194C	P40169	301 aa		3.1	□□□□□ -1.91
SKG1	YKR100C	TTI2	P47168	421 aa		3.1	□□□□□ -1.91
SKG1	YKR100C	GTO3	Q04806	366 aa		3.1	□□□□□ -1.91
SKG1	YKR100C	RFU1	Q08003	200 aa		3.1	□□□□□ -1.91
SKG1	YKR100C	SYC1	Q08553	188 aa	Predicted RBP	3.1	□□□□□ -1.91
SKG1	YKR100C	PEP8	P40335	379 aa		3.09	□□□□□ -1.91
SKG1	YKR100C	KRE28	Q04431	385 aa		3.09	□□□□□ -1.91
SKG1	YKR100C	YMR114C	Q04471	368 aa	Known RBP	3.09	□□□□□ -1.91
SKG1	YKR100C	CDC28	P00546	298 aa	Known RBP	3.08	□□□□□ -1.92
SKG1	YKR100C	RPS1B	P23248	255 aa	Known RBP	3.08	□□□□□ -1.92
SKG1	YKR100C	RNA15	P25299	296 aa	Predicted RBP	3.08	□□□□□ -1.92
SKG1	YKR100C	RPS0A	P32905	252 aa	Known RBP	3.08	□□□□□ -1.92
SKG1	YKR100C	LHP1	P33399	275 aa	Known RBP	3.08	□□□□□ -1.92
SKG1	YKR100C	RGI1	P40043	161 aa	Predicted RBP	3.08	□□□□□ -1.92
SKG1	YKR100C	ERG25	P53045	309 aa		3.08	□□□□□ -1.92
SKG1	YKR100C	YGR017W	P53210	297 aa		3.08	□□□□□ -1.92
SKG1	YKR100C	PEX10	Q05568	337 aa		3.08	□□□□□ -1.92
SKG1	YKR100C	YLR173W	Q06247	608 aa		3.08	□□□□□ -1.92
SKG1	YKR100C	APC9	Q12107	265 aa		3.08	□□□□□ -1.92
SKG1	YKR100C	MRS4	P23500	304 aa		3.07	□□□□□ -1.92
SKG1	YKR100C	HMX1	P32339	317 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms