RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	RNA14	P25298	677 aa	Known RBP	3.19	□□□□□ -1.9
LOS1	YKL205W	KRR1	P25586	316 aa	Predicted RBP	3.19	□□□□□ -1.9
LOS1	YKL205W	UTR5	P32630	166 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	REC104	P33323	182 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	NAT2	P37293	288 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	POP8	P38208	133 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	CSH1	P38287	376 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	GCV3	P39726	170 aa	Predicted RBP	3.19	□□□□□ -1.9
LOS1	YKL205W	PHS1	P40857	217 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	HXT14	P42833	540 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	YCL001W-A	P87012	153 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	ERP1	Q05359	219 aa	Known RBP	3.19	□□□□□ -1.9
LOS1	YKL205W	PRR2	Q12310	699 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	RAX2	Q12465	1220 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	COA2	Q3E823	68 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	HBN1	Q96VH4	193 aa		3.19	□□□□□ -1.9
LOS1	YKL205W	REP2	P03872	296 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	COS8	P38723	381 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	POG1	P40473	351 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	YFL054C	P43549	646 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	ARP3	P47117	449 aa	Known RBP	3.18	□□□□□ -1.9
LOS1	YKL205W	YML018C	Q03730	393 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	YKL187C	P34231	750 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	YHL044W	P38727	235 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	YAP1802	P53309	568 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	HSK3	P69852	69 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	ODC1	Q03028	310 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	HUG1	Q6Q5K6	68 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	IRA2	P19158	3079 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	TPI1	P00942	248 aa	Known RBP	3.18	□□□□□ -1.9
LOS1	YKL205W	RPL25	P04456	142 aa	Known RBP	3.18	□□□□□ -1.9
LOS1	YKL205W	ERS1	P17261	260 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	PCL1	P24867	279 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	YHR138C	P38841	114 aa	Predicted RBP	3.18	□□□□□ -1.9
LOS1	YKL205W	GAT2	P40209	560 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	TIR3	P40552	269 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	TIM44	Q01852	431 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	RPL21A	Q02753	160 aa	Known RBP	3.18	□□□□□ -1.9
LOS1	YKL205W	DPB4	Q04603	196 aa	Known RBP	3.18	□□□□□ -1.9
LOS1	YKL205W	ATG33	Q06485	197 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	YPR071W	Q12346	211 aa		3.18	□□□□□ -1.9
LOS1	YKL205W	RPL21B	Q12672	160 aa	Known RBP	3.18	□□□□□ -1.9
LOS1	YKL205W	RPL35A	P0CX84	120 aa	Known RBP	3.17	□□□□□ -1.9
LOS1	YKL205W	RPL35B	P0CX85	120 aa	Known RBP	3.17	□□□□□ -1.9
LOS1	YKL205W	PHM8	P40025	321 aa		3.17	□□□□□ -1.9
LOS1	YKL205W	TTI2	P47168	421 aa		3.17	□□□□□ -1.9
LOS1	YKL205W	BOR1	P53838	576 aa		3.17	□□□□□ -1.9
LOS1	YKL205W	OCA2	P53949	197 aa		3.17	□□□□□ -1.9
LOS1	YKL205W	ATP14	Q12349	124 aa		3.17	□□□□□ -1.9
LOS1	YKL205W	QCR9	P22289	66 aa		3.17	□□□□□ -1.9
LOS1	YKL205W	ALK2	P32789	676 aa	Predicted RBP	3.17	□□□□□ -1.9
LOS1	YKL205W	BDH1	P39714	382 aa		3.17	□□□□□ -1.9
LOS1	YKL205W	BUL1	P48524	976 aa		3.17	□□□□□ -1.9
LOS1	YKL205W	UBC13	P52490	153 aa		3.17	□□□□□ -1.9
LOS1	YKL205W	MEH1	Q02205	184 aa		3.17	□□□□□ -1.9
LOS1	YKL205W	ATX2	Q12067	313 aa		3.17	□□□□□ -1.9
LOS1	YKL205W	UTP23	Q12339	254 aa	Known RBP	3.17	□□□□□ -1.9
LOS1	YKL205W	YPL108W	Q02872	168 aa	Predicted RBP	3.16	□□□□□ -1.9
LOS1	YKL205W	MRP51	Q02950	344 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	LAS17	Q12446	633 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	RPL9A	P05738	191 aa	Known RBP	3.16	□□□□□ -1.9
LOS1	YKL205W	RAD52	P06778	471 aa	Known RBP	3.16	□□□□□ -1.9
LOS1	YKL205W	PRE9	P23638	258 aa	Known RBP	3.16	□□□□□ -1.9
LOS1	YKL205W	YGL185C	P53100	379 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	TMA10	Q06177	86 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	YLR031W	Q07978	186 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	TIR1	P10863	254 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	MIA40	P36046	403 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	YGR018C	P53211	109 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	SLX9	P53251	210 aa	Predicted RBP	3.16	□□□□□ -1.9
LOS1	YKL205W	YML122C	Q03207	126 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	DCS1	Q06151	350 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	CTR3	Q06686	241 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	BER1	Q06688	274 aa	Known RBP	3.16	□□□□□ -1.9
LOS1	YKL205W	MCH1	Q07376	486 aa		3.16	□□□□□ -1.9
LOS1	YKL205W	CYC7	P00045	113 aa		3.15	□□□□□ -1.9
LOS1	YKL205W	SOD1	P00445	154 aa	Known RBP	3.15	□□□□□ -1.9
LOS1	YKL205W	RPS22A	P0C0W1	130 aa	Known RBP	3.15	□□□□□ -1.9
LOS1	YKL205W	UBI4	P0CG63	381 aa	Known RBP	3.15	□□□□□ -1.9
LOS1	YKL205W	SEC59	P20048	519 aa		3.15	□□□□□ -1.9
LOS1	YKL205W	YKR045C	P36138	183 aa		3.15	□□□□□ -1.9
LOS1	YKL205W	FIG1	P38224	298 aa		3.15	□□□□□ -1.9
LOS1	YKL205W	QDR3	P38227	689 aa		3.15	□□□□□ -1.9
LOS1	YKL205W	MOG1	P47123	218 aa		3.15	□□□□□ -1.9
LOS1	YKL205W	MRPL50	P53724	139 aa		3.15	□□□□□ -1.9
LOS1	YKL205W	YOR029W	Q12243	111 aa		3.15	□□□□□ -1.9
LOS1	YKL205W	AGC1	Q12482	902 aa		3.15	□□□□□ -1.9
LOS1	YKL205W	VMA9	Q3E7B6	73 aa		3.15	□□□□□ -1.9
LOS1	YKL205W	PMU1	P36069	295 aa		3.15	□□□□□ -1.91
LOS1	YKL205W	ATF1	P40353	525 aa		3.15	□□□□□ -1.91
LOS1	YKL205W	PIR5	P46999	287 aa		3.15	□□□□□ -1.91
LOS1	YKL205W	HOF1	Q05080	669 aa		3.15	□□□□□ -1.91
LOS1	YKL205W	YBR085C-A	O43137	85 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	CPR2	P23285	205 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	ECM25	P32525	599 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	AFR1	P33304	620 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	GPP2	P40106	250 aa	Known RBP	3.14	□□□□□ -1.91
LOS1	YKL205W	IMP2	P46972	177 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	FMP41	P53889	259 aa	Known RBP	3.14	□□□□□ -1.91
LOS1	YKL205W	RDI1	Q12434	202 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms