RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C TSC3Q3E790 80 aa1.05□□□□□ -2.24
VPS55YJR044C YFR032C-BQ8TGU2 87 aa1.05□□□□□ -2.24
VPS55YJR044C YOL085CQ99345 113 aa1.05□□□□□ -2.24
VPS55YJR044C CDC8P00572 216 aa1.04□□□□□ -2.24
VPS55YJR044C MSW1P04803 379 aa1.04□□□□□ -2.24
VPS55YJR044C PET54P10834 293 aa1.04□□□□□ -2.24
VPS55YJR044C CCA1P21269 546 aa1.04□□□□□ -2.24
VPS55YJR044C AHC2P25649 128 aa1.04□□□□□ -2.24
VPS55YJR044C MEI4P29467 408 aa1.04□□□□□ -2.24
VPS55YJR044C TCA17P32613 152 aa1.04□□□□□ -2.24
VPS55YJR044C TVP38P36164 337 aa1.04□□□□□ -2.24
VPS55YJR044C IRC22P40006 225 aa1.04□□□□□ -2.24
VPS55YJR044C FCY21P40039 528 aa1.04□□□□□ -2.24
VPS55YJR044C RSM25P40496 264 aa1.04□□□□□ -2.24
VPS55YJR044C MRPL49P40858 161 aaPredicted RBP1.04□□□□□ -2.24
VPS55YJR044C YFR045WP43617 309 aa1.04□□□□□ -2.24
VPS55YJR044C AIF1P52923 378 aa1.04□□□□□ -2.24
VPS55YJR044C ARO8P53090 500 aaKnown RBP1.04□□□□□ -2.24
VPS55YJR044C TIM13P53299 105 aa1.04□□□□□ -2.24
VPS55YJR044C COS6P53344 381 aa1.04□□□□□ -2.24
VPS55YJR044C YNL010WP53981 241 aaKnown RBP1.04□□□□□ -2.24
VPS55YJR044C DID2P69771 204 aa1.04□□□□□ -2.24
VPS55YJR044C RAV2Q03956 351 aa1.04□□□□□ -2.24
VPS55YJR044C ARO80Q04052 950 aa1.04□□□□□ -2.24
VPS55YJR044C SPC2Q04969 178 aa1.04□□□□□ -2.24
VPS55YJR044C YPR127WQ06494 345 aa1.04□□□□□ -2.24
VPS55YJR044C PRM7Q12459 698 aa1.04□□□□□ -2.24
VPS55YJR044C YML100W-AQ8TGT0 57 aa1.04□□□□□ -2.24
VPS55YJR044C Q0255P03881 472 aa1.03□□□□□ -2.24
VPS55YJR044C HIS3P06633 220 aa1.03□□□□□ -2.24
VPS55YJR044C CPA1P07258 411 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C SGA1P08019 549 aa1.03□□□□□ -2.24
VPS55YJR044C NSP1P14907 823 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C RPB3P16370 318 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C TOM40P23644 387 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C YKL102CP34249 101 aa1.03□□□□□ -2.24
VPS55YJR044C YKR041WP36134 250 aa1.03□□□□□ -2.24
VPS55YJR044C MAK5P38112 773 aaPredicted RBP1.03□□□□□ -2.24
VPS55YJR044C MED6P38782 295 aa1.03□□□□□ -2.24
VPS55YJR044C TVP23P38962 199 aa1.03□□□□□ -2.24
VPS55YJR044C EDC3P39998 551 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C RPA43P46669 326 aa1.03□□□□□ -2.24
VPS55YJR044C CIS3P47001 227 aa1.03□□□□□ -2.24
VPS55YJR044C ARP3P47117 449 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C EAF6P47128 113 aa1.03□□□□□ -2.24
VPS55YJR044C UBC12P52491 188 aa1.03□□□□□ -2.24
VPS55YJR044C YGL204CP53089 101 aa1.03□□□□□ -2.24
VPS55YJR044C NQM1P53228 333 aaPredicted RBP1.03□□□□□ -2.24
VPS55YJR044C HHT1P61830 136 aa1.03□□□□□ -2.24
VPS55YJR044C YMR295CQ03559 197 aa1.03□□□□□ -2.24
VPS55YJR044C TRM12Q04235 462 aa1.03□□□□□ -2.24
VPS55YJR044C YOL014WQ08110 124 aa1.03□□□□□ -2.24
VPS55YJR044C NSL1Q12143 216 aa1.03□□□□□ -2.24
VPS55YJR044C MPD1Q12404 318 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C RDI1Q12434 202 aa1.03□□□□□ -2.24
VPS55YJR044C YPL229WQ99395 206 aa1.03□□□□□ -2.24
VPS55YJR044C PDR18P53756 1333 aa1.03□□□□□ -2.24
VPS55YJR044C YHR139C-AO13536 103 aa1.02□□□□□ -2.25
VPS55YJR044C YPR096CO13587 100 aa1.02□□□□□ -2.25
VPS55YJR044C TIM9O74700 87 aa1.02□□□□□ -2.25
VPS55YJR044C IDP1P21954 428 aaKnown RBP1.02□□□□□ -2.25
VPS55YJR044C CNB1P25296 175 aa1.02□□□□□ -2.25
VPS55YJR044C SNC2P33328 115 aa1.02□□□□□ -2.25
VPS55YJR044C CLG1P35190 452 aa1.02□□□□□ -2.25
VPS55YJR044C PAN3P36102 679 aaPredicted RBP1.02□□□□□ -2.25
VPS55YJR044C UTP30P36144 274 aaKnown RBP1.02□□□□□ -2.25
VPS55YJR044C NSG1P38837 291 aa1.02□□□□□ -2.25
VPS55YJR044C YER134CP40081 178 aa1.02□□□□□ -2.25
VPS55YJR044C RFC2P40348 353 aa1.02□□□□□ -2.25
VPS55YJR044C PGD1P40356 397 aa1.02□□□□□ -2.25
VPS55YJR044C ICE2P40499 491 aa1.02□□□□□ -2.25
VPS55YJR044C MNN5P46982 586 aa1.02□□□□□ -2.25
VPS55YJR044C GPI14P47088 403 aaKnown RBP1.02□□□□□ -2.25
VPS55YJR044C YJR111CP47148 283 aaKnown RBP1.02□□□□□ -2.25
VPS55YJR044C SBH1P52870 82 aa1.02□□□□□ -2.25
VPS55YJR044C YGR042WP53227 271 aa1.02□□□□□ -2.25
VPS55YJR044C MPA43P53583 542 aaPredicted RBP1.02□□□□□ -2.25
VPS55YJR044C YDR274CP87283 123 aa1.02□□□□□ -2.25
VPS55YJR044C VPS28Q02767 242 aa1.02□□□□□ -2.25
VPS55YJR044C GRX5Q02784 150 aa1.02□□□□□ -2.25
VPS55YJR044C SWP1Q02795 286 aa1.02□□□□□ -2.25
VPS55YJR044C YDR249CQ03787 373 aa1.02□□□□□ -2.25
VPS55YJR044C PKR1Q03880 122 aaKnown RBP1.02□□□□□ -2.25
VPS55YJR044C GPI17Q04080 534 aa1.02□□□□□ -2.25
VPS55YJR044C YDR391CQ04170 232 aa1.02□□□□□ -2.25
VPS55YJR044C ARR2Q06597 130 aa1.02□□□□□ -2.25
VPS55YJR044C AKR2Q12013 749 aa1.02□□□□□ -2.25
VPS55YJR044C YLR046CQ12253 270 aa1.02□□□□□ -2.25
VPS55YJR044C ATO3Q12359 275 aa1.02□□□□□ -2.25
VPS55YJR044C MET5P47169 1442 aa1.01□□□□□ -2.25
VPS55YJR044C TRM3Q07527 1436 aa1.01□□□□□ -2.25
VPS55YJR044C YAR023CD6VPM8 179 aa1.01□□□□□ -2.25
VPS55YJR044C REP2P03872 296 aa1.01□□□□□ -2.25
VPS55YJR044C RPS23AP0CX29 145 aaKnown RBP1.01□□□□□ -2.25
VPS55YJR044C RPS23BP0CX30 145 aa1.01□□□□□ -2.25
VPS55YJR044C GRX2P17695 143 aaKnown RBP1.01□□□□□ -2.25
VPS55YJR044C ARO7P32178 256 aa1.01□□□□□ -2.25
VPS55YJR044C MDH3P32419 343 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
VPS55YJR044C SEC17P32602 292 aa1.01□□□□□ -2.25
VPS55YJR044C FMT1P32785 401 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms