RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C TSC3Q3E790 80 aa1.05□□□□□ -2.24
VPS55YJR044C YFR032C-BQ8TGU2 87 aa1.05□□□□□ -2.24
VPS55YJR044C YOL085CQ99345 113 aa1.05□□□□□ -2.24
VPS55YJR044C CDC8P00572 216 aa1.04□□□□□ -2.24
VPS55YJR044C MSW1P04803 379 aa1.04□□□□□ -2.24
VPS55YJR044C PET54P10834 293 aa1.04□□□□□ -2.24
VPS55YJR044C CCA1P21269 546 aa1.04□□□□□ -2.24
VPS55YJR044C AHC2P25649 128 aa1.04□□□□□ -2.24
VPS55YJR044C MEI4P29467 408 aa1.04□□□□□ -2.24
VPS55YJR044C TCA17P32613 152 aa1.04□□□□□ -2.24
VPS55YJR044C TVP38P36164 337 aa1.04□□□□□ -2.24
VPS55YJR044C IRC22P40006 225 aa1.04□□□□□ -2.24
VPS55YJR044C FCY21P40039 528 aa1.04□□□□□ -2.24
VPS55YJR044C RSM25P40496 264 aa1.04□□□□□ -2.24
VPS55YJR044C MRPL49P40858 161 aaPredicted RBP1.04□□□□□ -2.24
VPS55YJR044C YFR045WP43617 309 aa1.04□□□□□ -2.24
VPS55YJR044C AIF1P52923 378 aa1.04□□□□□ -2.24
VPS55YJR044C ARO8P53090 500 aaKnown RBP1.04□□□□□ -2.24
VPS55YJR044C TIM13P53299 105 aa1.04□□□□□ -2.24
VPS55YJR044C COS6P53344 381 aa1.04□□□□□ -2.24
VPS55YJR044C YNL010WP53981 241 aaKnown RBP1.04□□□□□ -2.24
VPS55YJR044C DID2P69771 204 aa1.04□□□□□ -2.24
VPS55YJR044C RAV2Q03956 351 aa1.04□□□□□ -2.24
VPS55YJR044C ARO80Q04052 950 aa1.04□□□□□ -2.24
VPS55YJR044C SPC2Q04969 178 aa1.04□□□□□ -2.24
VPS55YJR044C YPR127WQ06494 345 aa1.04□□□□□ -2.24
VPS55YJR044C PRM7Q12459 698 aa1.04□□□□□ -2.24
VPS55YJR044C YML100W-AQ8TGT0 57 aa1.04□□□□□ -2.24
VPS55YJR044C Q0255P03881 472 aa1.03□□□□□ -2.24
VPS55YJR044C HIS3P06633 220 aa1.03□□□□□ -2.24
VPS55YJR044C CPA1P07258 411 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C SGA1P08019 549 aa1.03□□□□□ -2.24
VPS55YJR044C NSP1P14907 823 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C RPB3P16370 318 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C TOM40P23644 387 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C YKL102CP34249 101 aa1.03□□□□□ -2.24
VPS55YJR044C YKR041WP36134 250 aa1.03□□□□□ -2.24
VPS55YJR044C MAK5P38112 773 aaPredicted RBP1.03□□□□□ -2.24
VPS55YJR044C MED6P38782 295 aa1.03□□□□□ -2.24
VPS55YJR044C TVP23P38962 199 aa1.03□□□□□ -2.24
VPS55YJR044C EDC3P39998 551 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C RPA43P46669 326 aa1.03□□□□□ -2.24
VPS55YJR044C CIS3P47001 227 aa1.03□□□□□ -2.24
VPS55YJR044C ARP3P47117 449 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C EAF6P47128 113 aa1.03□□□□□ -2.24
VPS55YJR044C UBC12P52491 188 aa1.03□□□□□ -2.24
VPS55YJR044C YGL204CP53089 101 aa1.03□□□□□ -2.24
VPS55YJR044C NQM1P53228 333 aaPredicted RBP1.03□□□□□ -2.24
VPS55YJR044C HHT1P61830 136 aa1.03□□□□□ -2.24
VPS55YJR044C YMR295CQ03559 197 aa1.03□□□□□ -2.24
VPS55YJR044C TRM12Q04235 462 aa1.03□□□□□ -2.24
VPS55YJR044C YOL014WQ08110 124 aa1.03□□□□□ -2.24
VPS55YJR044C NSL1Q12143 216 aa1.03□□□□□ -2.24
VPS55YJR044C MPD1Q12404 318 aaKnown RBP1.03□□□□□ -2.24
VPS55YJR044C RDI1Q12434 202 aa1.03□□□□□ -2.24
VPS55YJR044C YPL229WQ99395 206 aa1.03□□□□□ -2.24
VPS55YJR044C PDR18P53756 1333 aa1.03□□□□□ -2.24
VPS55YJR044C YHR139C-AO13536 103 aa1.02□□□□□ -2.25
VPS55YJR044C YPR096CO13587 100 aa1.02□□□□□ -2.25
VPS55YJR044C TIM9O74700 87 aa1.02□□□□□ -2.25
VPS55YJR044C IDP1P21954 428 aaKnown RBP1.02□□□□□ -2.25
VPS55YJR044C CNB1P25296 175 aa1.02□□□□□ -2.25
VPS55YJR044C SNC2P33328 115 aa1.02□□□□□ -2.25
VPS55YJR044C CLG1P35190 452 aa1.02□□□□□ -2.25
VPS55YJR044C PAN3P36102 679 aaPredicted RBP1.02□□□□□ -2.25
VPS55YJR044C UTP30P36144 274 aaKnown RBP1.02□□□□□ -2.25
VPS55YJR044C NSG1P38837 291 aa1.02□□□□□ -2.25
VPS55YJR044C YER134CP40081 178 aa1.02□□□□□ -2.25
VPS55YJR044C RFC2P40348 353 aa1.02□□□□□ -2.25
VPS55YJR044C PGD1P40356 397 aa1.02□□□□□ -2.25
VPS55YJR044C ICE2P40499 491 aa1.02□□□□□ -2.25
VPS55YJR044C MNN5P46982 586 aa1.02□□□□□ -2.25
VPS55YJR044C GPI14P47088 403 aaKnown RBP1.02□□□□□ -2.25
VPS55YJR044C YJR111CP47148 283 aaKnown RBP1.02□□□□□ -2.25
VPS55YJR044C SBH1P52870 82 aa1.02□□□□□ -2.25
VPS55YJR044C YGR042WP53227 271 aa1.02□□□□□ -2.25
VPS55YJR044C MPA43P53583 542 aaPredicted RBP1.02□□□□□ -2.25
VPS55YJR044C YDR274CP87283 123 aa1.02□□□□□ -2.25
VPS55YJR044C VPS28Q02767 242 aa1.02□□□□□ -2.25
VPS55YJR044C GRX5Q02784 150 aa1.02□□□□□ -2.25
VPS55YJR044C SWP1Q02795 286 aa1.02□□□□□ -2.25
VPS55YJR044C YDR249CQ03787 373 aa1.02□□□□□ -2.25
VPS55YJR044C PKR1Q03880 122 aaKnown RBP1.02□□□□□ -2.25
VPS55YJR044C GPI17Q04080 534 aa1.02□□□□□ -2.25
VPS55YJR044C YDR391CQ04170 232 aa1.02□□□□□ -2.25
VPS55YJR044C ARR2Q06597 130 aa1.02□□□□□ -2.25
VPS55YJR044C AKR2Q12013 749 aa1.02□□□□□ -2.25
VPS55YJR044C YLR046CQ12253 270 aa1.02□□□□□ -2.25
VPS55YJR044C ATO3Q12359 275 aa1.02□□□□□ -2.25
VPS55YJR044C MET5P47169 1442 aa1.01□□□□□ -2.25
VPS55YJR044C TRM3Q07527 1436 aa1.01□□□□□ -2.25
VPS55YJR044C YAR023CD6VPM8 179 aa1.01□□□□□ -2.25
VPS55YJR044C REP2P03872 296 aa1.01□□□□□ -2.25
VPS55YJR044C RPS23AP0CX29 145 aaKnown RBP1.01□□□□□ -2.25
VPS55YJR044C RPS23BP0CX30 145 aa1.01□□□□□ -2.25
VPS55YJR044C GRX2P17695 143 aaKnown RBP1.01□□□□□ -2.25
VPS55YJR044C ARO7P32178 256 aa1.01□□□□□ -2.25
VPS55YJR044C MDH3P32419 343 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
VPS55YJR044C SEC17P32602 292 aa1.01□□□□□ -2.25
VPS55YJR044C FMT1P32785 401 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms