RNA–Protein interactions for RNA: YJR029W

YJR029W, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YJR029W, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YJR029W	YJR029W	TY2A-OR1	Q12439	438 aa		0.9	□□□□□ -2.26
YJR029W	YJR029W	RMP1	Q12530	201 aa		0.9	□□□□□ -2.26
YJR029W	YJR029W	YMR030W-A	Q3E760	96 aa		0.9	□□□□□ -2.26
YJR029W	YJR029W	PAU9	Q3E770	120 aa		0.9	□□□□□ -2.26
YJR029W	YJR029W	ISD11	Q6Q560	94 aa		0.9	□□□□□ -2.26
YJR029W	YJR029W	ATG40	Q99325	256 aa		0.9	□□□□□ -2.26
YJR029W	YJR029W	ACC1	Q00955	2233 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	TPK3	P05986	398 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	CDC36	P06100	191 aa	Predicted RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	FPR2	P32472	135 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	ALK2	P32789	676 aa	Predicted RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	UBC6	P33296	250 aa	Predicted RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	POA1	P38218	177 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YER079W	P40052	210 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	YER188W	P40103	239 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YMR144W	P40214	342 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	YIL163C	P40448	117 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	CAT5	P41735	233 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	SNZ3	P43545	298 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YFL019C	P43576	117 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	RRP46	P53256	223 aa	Predicted RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	MEP3	P53390	489 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YNR048W	P53740	393 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	SNZ2	P53824	298 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	RPL22B	P56628	122 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	PMP3	P87284	55 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	ATG16	Q03818	150 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	RNH1	Q04740	348 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YMR252C	Q04814	134 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	PAL1	Q05518	499 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	HRI1	Q05905	244 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	AIM39	Q08223	395 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	NRT1	Q08485	598 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YLR046C	Q12253	270 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	YIL002W-A	Q3E7Z5	69 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	HTL1	Q9URQ5	78 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YER188C-A	P0C0V2	99 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YSC83	P32792	385 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	HOT13	P36078	116 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	PET10	P36139	283 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YBR197C	P38306	217 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	COS111	P38308	924 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	PDS1	P40316	373 aa	Predicted RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	FKH2	P41813	862 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	PAM16	P42949	149 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	IBA57	P47158	497 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	PHB2	P50085	310 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	PAU4	P53427	120 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	ALO1	P54783	526 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	SPG3	Q04398	127 aa	Predicted RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	YTH1	Q06102	208 aa	Predicted RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	YLR036C	Q07986	203 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YOR008C-A	Q3E7B9	74 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YNL042W-B	Q3E7Z2	85 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	MRP10	O75012	95 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YLR156W	P0CE96	114 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YLR159W	P0CE97	114 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YLR161W	P0CE98	114 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YLR157W-D	P0CE99	70 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	UBI4	P0CG63	381 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	RPL40A	P0CH08	128 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	RPL40B	P0CH09	128 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	ERD2	P18414	219 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	RER1	P25560	188 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	ATG22	P25568	528 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YMC1	P32331	307 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	MRP49	P32388	137 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YKR070W	P36151	352 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	AIM29	P36154	155 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	NRG2	P38082	220 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	POP8	P38208	133 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	MSY1	P48527	492 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	TYW3	P53177	273 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	CAX4	P53223	239 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YNL260C	P53846	198 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	LSM7	P53905	115 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	ARV1	Q06541	321 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	CDA1	Q06702	301 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	MRL1	Q06815	381 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	IRC13	Q08630	104 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	MCH5	Q08777	521 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YOR289W	Q12012	251 aa	Predicted RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	NUS1	Q12063	375 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	TY1A-NL1	Q12391	440 aa	Known RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	MRPL23	Q12487	163 aa	Predicted RBP	0.9	□□□□□ -2.27
YJR029W	YJR029W	SUS1	Q6WNK7	96 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	YMR001C-A	Q8TGS9	76 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	Q0032	Q9ZZX7	96 aa		0.9	□□□□□ -2.27
YJR029W	YJR029W	CYC1	P00044	109 aa	Predicted RBP	0.89	□□□□□ -2.27
YJR029W	YJR029W	RPL15A	P05748	204 aa	Known RBP	0.89	□□□□□ -2.27
YJR029W	YJR029W	RPL42A	P0CX27	106 aa	Known RBP	0.89	□□□□□ -2.27
YJR029W	YJR029W	RPL42B	P0CX28	106 aa	Known RBP	0.89	□□□□□ -2.27
YJR029W	YJR029W	SEN2	P16658	377 aa		0.89	□□□□□ -2.27
YJR029W	YJR029W	STE18	P18852	110 aa		0.89	□□□□□ -2.27
YJR029W	YJR029W	BUD23	P25627	275 aa	Predicted RBP	0.89	□□□□□ -2.27
YJR029W	YJR029W	SDH4	P37298	181 aa		0.89	□□□□□ -2.27
YJR029W	YJR029W	FIR1	P40020	876 aa		0.89	□□□□□ -2.27
YJR029W	YJR029W	RRG9	P40156	214 aa		0.89	□□□□□ -2.27
YJR029W	YJR029W	OSW5	P40219	148 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms