RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C ILM1P47155 203 aa1.61□□□□□ -2.15
RTT101YJL047C PGU1P47180 361 aa1.61□□□□□ -2.15
RTT101YJL047C HHT1P61830 136 aa1.61□□□□□ -2.15
RTT101YJL047C RPL21AQ02753 160 aaKnown RBP1.61□□□□□ -2.15
RTT101YJL047C ARL3Q02804 198 aa1.61□□□□□ -2.15
RTT101YJL047C GRH1Q04410 372 aaKnown RBP1.61□□□□□ -2.15
RTT101YJL047C LDB18Q07887 179 aa1.61□□□□□ -2.15
RTT101YJL047C PAN1P32521 1480 aa1.61□□□□□ -2.15
RTT101YJL047C YOR304C-AO14468 76 aa1.61□□□□□ -2.15
RTT101YJL047C YPR170W-BP0C5R9 85 aa1.61□□□□□ -2.15
RTT101YJL047C PBI2P0CT04 75 aaKnown RBP1.61□□□□□ -2.15
RTT101YJL047C STP22P25604 385 aa1.61□□□□□ -2.15
RTT101YJL047C LHP1P33399 275 aaKnown RBP1.61□□□□□ -2.15
RTT101YJL047C RFS1P38234 210 aaKnown RBP1.61□□□□□ -2.15
RTT101YJL047C YER189WP40104 122 aa1.61□□□□□ -2.15
RTT101YJL047C MEP2P41948 499 aa1.61□□□□□ -2.15
RTT101YJL047C YGL262WP53054 175 aa1.61□□□□□ -2.15
RTT101YJL047C YML108WQ03759 105 aa1.61□□□□□ -2.15
RTT101YJL047C API2Q04413 109 aa1.61□□□□□ -2.15
RTT101YJL047C FKS1P38631 1876 aaKnown RBP1.6□□□□□ -2.15
RTT101YJL047C RPS20P38701 121 aaKnown RBP1.6□□□□□ -2.15
RTT101YJL047C RPF1P38805 295 aaKnown RBP1.6□□□□□ -2.15
RTT101YJL047C YPL073CP40323 161 aa1.6□□□□□ -2.15
RTT101YJL047C RFC2P40348 353 aa1.6□□□□□ -2.15
RTT101YJL047C FIP1P45976 327 aa1.6□□□□□ -2.15
RTT101YJL047C BOR1P53838 576 aa1.6□□□□□ -2.15
RTT101YJL047C DID2P69771 204 aa1.6□□□□□ -2.15
RTT101YJL047C COF1Q03048 143 aaKnown RBP1.6□□□□□ -2.15
RTT101YJL047C YDL180WQ12301 547 aa1.6□□□□□ -2.15
RTT101YJL047C JID1Q12350 301 aa1.6□□□□□ -2.15
RTT101YJL047C DGK1Q12382 290 aa1.6□□□□□ -2.15
RTT101YJL047C GEP5Q12393 293 aa1.6□□□□□ -2.15
RTT101YJL047C HTL1Q9URQ5 78 aa1.6□□□□□ -2.15
RTT101YJL047C BUD4P47136 1447 aa1.6□□□□□ -2.15
RTT101YJL047C RPB9P27999 122 aa1.6□□□□□ -2.15
RTT101YJL047C SPT14P32363 452 aa1.6□□□□□ -2.15
RTT101YJL047C MRP49P32388 137 aa1.6□□□□□ -2.15
RTT101YJL047C TKL2P33315 681 aa1.6□□□□□ -2.15
RTT101YJL047C OM14P38325 134 aa1.6□□□□□ -2.15
RTT101YJL047C POP4P38336 279 aa1.6□□□□□ -2.15
RTT101YJL047C PGD1P40356 397 aa1.6□□□□□ -2.15
RTT101YJL047C BUD13P46947 266 aaPredicted RBP1.6□□□□□ -2.15
RTT101YJL047C SKI6P46948 246 aaPredicted RBP1.6□□□□□ -2.15
RTT101YJL047C OST2P46964 130 aa1.6□□□□□ -2.15
RTT101YJL047C RPE1P46969 238 aa1.6□□□□□ -2.15
RTT101YJL047C SDH7Q04401 133 aa1.6□□□□□ -2.15
RTT101YJL047C ECM19Q06011 112 aa1.6□□□□□ -2.15
RTT101YJL047C YPL247CQ12523 523 aa1.6□□□□□ -2.15
RTT101YJL047C DFM1Q12743 341 aaKnown RBP1.6□□□□□ -2.15
RTT101YJL047C YIR021W-AQ3E739 70 aa1.6□□□□□ -2.15
RTT101YJL047C TFC1P32367 649 aa1.59□□□□□ -2.15
RTT101YJL047C DLS1P40366 167 aa1.59□□□□□ -2.15
RTT101YJL047C SYS1P41544 203 aa1.59□□□□□ -2.15
RTT101YJL047C YFR054CP43622 192 aa1.59□□□□□ -2.15
RTT101YJL047C TTI2P47168 421 aa1.59□□□□□ -2.15
RTT101YJL047C YGL088WP53151 121 aa1.59□□□□□ -2.15
RTT101YJL047C VPS71Q03433 280 aa1.59□□□□□ -2.15
RTT101YJL047C PRP11Q07350 266 aaPredicted RBP1.59□□□□□ -2.15
RTT101YJL047C YOL029CQ08187 201 aa1.59□□□□□ -2.15
RTT101YJL047C YPL264CQ08980 353 aa1.59□□□□□ -2.15
RTT101YJL047C MCP1Q12106 302 aa1.59□□□□□ -2.15
RTT101YJL047C YLR099W-AQ3E798 87 aa1.59□□□□□ -2.15
RTT101YJL047C YPR014CQ6B0W2 109 aa1.59□□□□□ -2.15
RTT101YJL047C SSN2P38931 1420 aa1.59□□□□□ -2.16
RTT101YJL047C ADK1P07170 222 aaKnown RBP1.59□□□□□ -2.16
RTT101YJL047C SHE2P36068 246 aaKnown RBP RIP-Chip data1.59□□□□□ -2.16not detected
RTT101YJL047C YBR063CP38083 404 aa1.59□□□□□ -2.16
RTT101YJL047C YHI9P38765 294 aa1.59□□□□□ -2.16
RTT101YJL047C MED6P38782 295 aa1.59□□□□□ -2.16
RTT101YJL047C MIG3P39943 394 aa1.59□□□□□ -2.16
RTT101YJL047C SLM2P53955 656 aa1.59□□□□□ -2.16
RTT101YJL047C OSH6Q02201 448 aa1.59□□□□□ -2.16
RTT101YJL047C PBA1Q05778 276 aa1.59□□□□□ -2.16
RTT101YJL047C CNL1Q06333 122 aa1.59□□□□□ -2.16
RTT101YJL047C YOL014WQ08110 124 aa1.59□□□□□ -2.16
RTT101YJL047C YDL211CQ12121 372 aa1.59□□□□□ -2.16
RTT101YJL047C ATO3Q12359 275 aa1.59□□□□□ -2.16
RTT101YJL047C HSL1P34244 1518 aa1.58□□□□□ -2.16
RTT101YJL047C NUP157P40064 1391 aaKnown RBP1.58□□□□□ -2.16
RTT101YJL047C UBR1P19812 1950 aa1.58□□□□□ -2.16
RTT101YJL047C YLR462WO13556 202 aa1.58□□□□□ -2.16
RTT101YJL047C YLR156WP0CE96 114 aa1.58□□□□□ -2.16
RTT101YJL047C YLR159WP0CE97 114 aa1.58□□□□□ -2.16
RTT101YJL047C YLR161WP0CE98 114 aa1.58□□□□□ -2.16
RTT101YJL047C NMT1P14743 455 aa1.58□□□□□ -2.16
RTT101YJL047C RPB3P16370 318 aaKnown RBP1.58□□□□□ -2.16
RTT101YJL047C ATP15P21306 62 aa1.58□□□□□ -2.16
RTT101YJL047C PRE7P23724 241 aaKnown RBP1.58□□□□□ -2.16
RTT101YJL047C SFC1P33303 322 aa1.58□□□□□ -2.16
RTT101YJL047C SDH3P33421 198 aa1.58□□□□□ -2.16
RTT101YJL047C YPT53P36019 220 aa1.58□□□□□ -2.16
RTT101YJL047C PTH1P38876 190 aaKnown RBP1.58□□□□□ -2.16
RTT101YJL047C YEL075CP39972 122 aa1.58□□□□□ -2.16
RTT101YJL047C PRE5P40302 234 aaKnown RBP1.58□□□□□ -2.16
RTT101YJL047C SNM1P40993 198 aa1.58□□□□□ -2.16
RTT101YJL047C GLR1P41921 483 aaKnown RBP1.58□□□□□ -2.16
RTT101YJL047C UFD1P53044 361 aa1.58□□□□□ -2.16
RTT101YJL047C YGL118CP53132 145 aa1.58□□□□□ -2.16
RTT101YJL047C ALG9P53868 555 aaKnown RBP1.58□□□□□ -2.16
RTT101YJL047C NAT3Q06504 195 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms