RNA–Protein interactions for RNA: YJL010C

NOP9, Transcript of Essential subunit of U3-containing 90S preribosome, yeastyeast

Gene NOP9, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP9YJL010C IRC18P47056 224 aa0.41□□□□□ -2.34
NOP9YJL010C AIM25P47140 327 aa0.41□□□□□ -2.34
NOP9YJL010C DOC1P53068 250 aa0.41□□□□□ -2.34
NOP9YJL010C PDR17P53844 350 aa0.41□□□□□ -2.34
NOP9YJL010C PGA2P53903 129 aa0.41□□□□□ -2.34
NOP9YJL010C LSM7P53905 115 aaKnown RBP0.41□□□□□ -2.34
NOP9YJL010C YHR007C-AQ07074 71 aa0.41□□□□□ -2.34
NOP9YJL010C GIS3Q12418 502 aa0.41□□□□□ -2.34
NOP9YJL010C ATG40Q99325 256 aa0.41□□□□□ -2.34
NOP9YJL010C YPL229WQ99395 206 aa0.41□□□□□ -2.34
NOP9YJL010C MSB2P32334 1306 aa0.41□□□□□ -2.34
NOP9YJL010C SIR2P06700 562 aa0.4□□□□□ -2.34
NOP9YJL010C RPL2AP0CX45 254 aaKnown RBP0.4□□□□□ -2.34
NOP9YJL010C RPL2BP0CX46 254 aaKnown RBP0.4□□□□□ -2.34
NOP9YJL010C CBF1P17106 351 aa0.4□□□□□ -2.34
NOP9YJL010C YCR090CP25654 182 aaKnown RBP0.4□□□□□ -2.34
NOP9YJL010C RTC3P38804 111 aaPredicted RBP0.4□□□□□ -2.34
NOP9YJL010C CWC23P52868 283 aaPredicted RBP0.4□□□□□ -2.34
NOP9YJL010C MGA1P53050 456 aa0.4□□□□□ -2.34
NOP9YJL010C GET1P53192 235 aa0.4□□□□□ -2.34
NOP9YJL010C HNT1Q04344 158 aaKnown RBP0.4□□□□□ -2.34
NOP9YJL010C GGA1Q06336 557 aa0.4□□□□□ -2.34
NOP9YJL010C YPR174CQ06616 221 aaPredicted RBP0.4□□□□□ -2.34
NOP9YJL010C YOL160WQ08321 113 aa0.4□□□□□ -2.34
NOP9YJL010C RAD28Q12021 506 aa0.4□□□□□ -2.34
NOP9YJL010C MCP1Q12106 302 aa0.4□□□□□ -2.34
NOP9YJL010C YFR032C-BQ8TGU2 87 aa0.4□□□□□ -2.34
NOP9YJL010C YDR157WA0A023PZE8 133 aa0.4□□□□□ -2.35
NOP9YJL010C YLR236CA0A023PZG4 107 aa0.4□□□□□ -2.35
NOP9YJL010C CPA1P07258 411 aaKnown RBP0.4□□□□□ -2.35
NOP9YJL010C MER1P16523 270 aa0.4□□□□□ -2.35
NOP9YJL010C UTP30P36144 274 aaKnown RBP0.4□□□□□ -2.35
NOP9YJL010C YCR087C-AP37263 153 aa0.4□□□□□ -2.35
NOP9YJL010C OPY1P38271 328 aa0.4□□□□□ -2.35
NOP9YJL010C RIO2P40160 425 aaKnown RBP0.4□□□□□ -2.35
NOP9YJL010C RFC4P40339 323 aaKnown RBP0.4□□□□□ -2.35
NOP9YJL010C GCN20P43535 752 aaKnown RBP0.4□□□□□ -2.35
NOP9YJL010C KNH1P50112 268 aa0.4□□□□□ -2.35
NOP9YJL010C MRPS17Q03246 237 aaPredicted RBP0.4□□□□□ -2.35
NOP9YJL010C RCE1Q03530 315 aa0.4□□□□□ -2.35
NOP9YJL010C YMR295CQ03559 197 aa0.4□□□□□ -2.35
NOP9YJL010C YLR036CQ07986 203 aa0.4□□□□□ -2.35
NOP9YJL010C FSF1Q12029 327 aaKnown RBP0.4□□□□□ -2.35
NOP9YJL010C YNL146C-AQ3E7Z1 64 aa0.4□□□□□ -2.35
NOP9YJL010C CDC36P06100 191 aaPredicted RBP0.39□□□□□ -2.35
NOP9YJL010C MATALPHA2P0CY08 210 aa0.39□□□□□ -2.35
NOP9YJL010C HMLALPHA2P0CY09 210 aa0.39□□□□□ -2.35
NOP9YJL010C RPB3P16370 318 aaKnown RBP0.39□□□□□ -2.35
NOP9YJL010C YPK2P18961 677 aa0.39□□□□□ -2.35
NOP9YJL010C RPB4P20433 221 aaPredicted RBP0.39□□□□□ -2.35
NOP9YJL010C TCA17P32613 152 aa0.39□□□□□ -2.35
NOP9YJL010C IKI1P38874 309 aa0.39□□□□□ -2.35
NOP9YJL010C YGR050CP53231 118 aa0.39□□□□□ -2.35
NOP9YJL010C COG5P53951 403 aa0.39□□□□□ -2.35
NOP9YJL010C CWC21Q03375 135 aaKnown RBP0.39□□□□□ -2.35
NOP9YJL010C YMR007WQ03675 126 aa0.39□□□□□ -2.35
NOP9YJL010C YDR249CQ03787 373 aa0.39□□□□□ -2.35
NOP9YJL010C RNH1Q04740 348 aa0.39□□□□□ -2.35
NOP9YJL010C SEC17P32602 292 aa0.38□□□□□ -2.35
NOP9YJL010C UPS2P35200 230 aa0.38□□□□□ -2.35
NOP9YJL010C SHE2P36068 246 aaKnown RBP RIP-Chip data0.38□□□□□ -2.35not detected
NOP9YJL010C PAN3P36102 679 aaPredicted RBP0.38□□□□□ -2.35
NOP9YJL010C YER076CP40049 302 aa0.38□□□□□ -2.35
NOP9YJL010C TMA22P47089 198 aaPredicted RBP0.38□□□□□ -2.35
NOP9YJL010C ARO8P53090 500 aaKnown RBP0.38□□□□□ -2.35
NOP9YJL010C MMS2P53152 137 aa0.38□□□□□ -2.35
NOP9YJL010C MPA43P53583 542 aaPredicted RBP0.38□□□□□ -2.35
NOP9YJL010C UBC7Q02159 165 aa0.38□□□□□ -2.35
NOP9YJL010C IGO2Q9P305 131 aa0.38□□□□□ -2.35
NOP9YJL010C ARG80P07249 177 aa0.38□□□□□ -2.35
NOP9YJL010C SEC4P07560 215 aaKnown RBP0.38□□□□□ -2.35
NOP9YJL010C RPL27AP0C2H6 136 aaKnown RBP0.38□□□□□ -2.35
NOP9YJL010C NSP1P14907 823 aaKnown RBP0.38□□□□□ -2.35
NOP9YJL010C SEC11P15367 167 aa0.38□□□□□ -2.35
NOP9YJL010C STP22P25604 385 aa0.38□□□□□ -2.35
NOP9YJL010C RFA3P26755 122 aaKnown RBP0.38□□□□□ -2.35
NOP9YJL010C EDC3P39998 551 aaKnown RBP0.38□□□□□ -2.35
NOP9YJL010C SOK1P40317 901 aa0.38□□□□□ -2.35
NOP9YJL010C YPL073CP40323 161 aa0.38□□□□□ -2.35
NOP9YJL010C ARP3P47117 449 aaKnown RBP0.38□□□□□ -2.35
NOP9YJL010C POP3P53833 195 aaPredicted RBP0.38□□□□□ -2.35
NOP9YJL010C DGA1Q08650 418 aa0.38□□□□□ -2.35
NOP9YJL010C MBF1O14467 151 aaKnown RBP0.37□□□□□ -2.35
NOP9YJL010C VAR1P02381 398 aa0.37□□□□□ -2.35
NOP9YJL010C POR1P04840 283 aaKnown RBP0.37□□□□□ -2.35
NOP9YJL010C SNF4P12904 322 aa0.37□□□□□ -2.35
NOP9YJL010C ATP15P21306 62 aa0.37□□□□□ -2.35
NOP9YJL010C TRX3P25372 127 aa0.37□□□□□ -2.35
NOP9YJL010C YKT6P36015 200 aaKnown RBP0.37□□□□□ -2.35
NOP9YJL010C CAF4P36130 643 aa0.37□□□□□ -2.35
NOP9YJL010C MTW1P39731 289 aa0.37□□□□□ -2.35
NOP9YJL010C YEA4P40004 342 aa0.37□□□□□ -2.35
NOP9YJL010C YER134CP40081 178 aa0.37□□□□□ -2.35
NOP9YJL010C RTC4P53850 401 aa0.37□□□□□ -2.35
NOP9YJL010C GRX5Q02784 150 aa0.37□□□□□ -2.35
NOP9YJL010C YMR099CQ03161 297 aaKnown RBP0.37□□□□□ -2.35
NOP9YJL010C DYN3Q04949 312 aa0.37□□□□□ -2.35
NOP9YJL010C YOL014WQ08110 124 aa0.37□□□□□ -2.35
NOP9YJL010C GET4Q12125 312 aa0.37□□□□□ -2.35
NOP9YJL010C YPR014CQ6B0W2 109 aa0.37□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms