RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C YMR226CQ05016 267 aaKnown RBP1.82□□□□□ -2.12
CTK2YJL006C NEJ1Q06148 342 aa1.82□□□□□ -2.12
CTK2YJL006C HEM25Q07534 307 aa1.82□□□□□ -2.12
CTK2YJL006C PDR12Q02785 1511 aa1.81□□□□□ -2.12
CTK2YJL006C CDC10P25342 322 aaKnown RBP1.81□□□□□ -2.12
CTK2YJL006C OAC1P32332 324 aa1.81□□□□□ -2.12
CTK2YJL006C YBR063CP38083 404 aa1.81□□□□□ -2.12
CTK2YJL006C PHO88P38264 188 aaPredicted RBP1.81□□□□□ -2.12
CTK2YJL006C URA8P38627 578 aaPredicted RBP1.81□□□□□ -2.12
CTK2YJL006C ERG28P40030 148 aa1.81□□□□□ -2.12
CTK2YJL006C LSM4P40070 187 aaKnown RBP1.81□□□□□ -2.12
CTK2YJL006C RSM25P40496 264 aa1.81□□□□□ -2.12
CTK2YJL006C YFR054CP43622 192 aa1.81□□□□□ -2.12
CTK2YJL006C NSA1P53136 463 aaPredicted RBP1.81□□□□□ -2.12
CTK2YJL006C ABF2Q02486 183 aa1.81□□□□□ -2.12
CTK2YJL006C YML096WQ04489 525 aa1.81□□□□□ -2.12
CTK2YJL006C ATG38Q05789 226 aaKnown RBP1.81□□□□□ -2.12
CTK2YJL006C CDC123Q05791 360 aa1.81□□□□□ -2.12
CTK2YJL006C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
CTK2YJL006C GET4Q12125 312 aa1.81□□□□□ -2.12
CTK2YJL006C YKL183C-AQ3E765 70 aa1.81□□□□□ -2.12
CTK2YJL006C YIL177CP40434 1758 aa1.8□□□□□ -2.12
CTK2YJL006C YJL225CP40889 1758 aa1.8□□□□□ -2.12
CTK2YJL006C BCY1P07278 416 aaKnown RBP1.8□□□□□ -2.12
CTK2YJL006C NTF2P33331 125 aaKnown RBP1.8□□□□□ -2.12
CTK2YJL006C CBT1P36038 271 aaPredicted RBP1.8□□□□□ -2.12
CTK2YJL006C ERV15P38312 142 aa1.8□□□□□ -2.12
CTK2YJL006C YHR022CP38763 256 aa1.8□□□□□ -2.12
CTK2YJL006C YNL194CP40169 301 aa1.8□□□□□ -2.12
CTK2YJL006C PEP8P40335 379 aa1.8□□□□□ -2.12
CTK2YJL006C RFC4P40339 323 aaKnown RBP1.8□□□□□ -2.12
CTK2YJL006C YKE4P40544 346 aa1.8□□□□□ -2.12
CTK2YJL006C YIL001WP40560 513 aa1.8□□□□□ -2.12
CTK2YJL006C RAD17P48581 401 aa1.8□□□□□ -2.12
CTK2YJL006C TRM9P49957 279 aa1.8□□□□□ -2.12
CTK2YJL006C CWC23P52868 283 aaPredicted RBP1.8□□□□□ -2.12
CTK2YJL006C ERG25P53045 309 aa1.8□□□□□ -2.12
CTK2YJL006C CUS2P53830 285 aaPredicted RBP1.8□□□□□ -2.12
CTK2YJL006C CSF1Q12150 2958 aa1.8□□□□□ -2.12
CTK2YJL006C TPO4Q12256 659 aa1.8□□□□□ -2.12
CTK2YJL006C JLP1Q12358 412 aa1.8□□□□□ -2.12
CTK2YJL006C DCN1Q12395 269 aa1.8□□□□□ -2.12
CTK2YJL006C URB1P34241 1764 aaKnown RBP1.8□□□□□ -2.12
CTK2YJL006C RPL28P02406 149 aaKnown RBP1.79□□□□□ -2.12
CTK2YJL006C SPT3P06844 337 aa1.79□□□□□ -2.12
CTK2YJL006C YHR180WP38868 163 aa1.79□□□□□ -2.12
CTK2YJL006C PEX17P40155 199 aa1.79□□□□□ -2.12
CTK2YJL006C TOS8P53147 276 aa1.79□□□□□ -2.12
CTK2YJL006C CYT2Q00873 224 aa1.79□□□□□ -2.12
CTK2YJL006C YRA1Q12159 226 aaKnown RBP1.79□□□□□ -2.12
CTK2YJL006C CDC7P06243 507 aa1.78□□□□□ -2.12
CTK2YJL006C YPK2P18961 677 aa1.78□□□□□ -2.12
CTK2YJL006C IDH1P28834 360 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
CTK2YJL006C MGM101P32787 269 aaKnown RBP1.78□□□□□ -2.12
CTK2YJL006C BMT5P40493 336 aa1.78□□□□□ -2.12
CTK2YJL006C ADO1P47143 340 aaKnown RBP1.78□□□□□ -2.12
CTK2YJL006C MGA1P53050 456 aa1.78□□□□□ -2.12
CTK2YJL006C ERV29P53337 310 aa1.78□□□□□ -2.12
CTK2YJL006C FYV6P53913 173 aa1.78□□□□□ -2.12
CTK2YJL006C DID2P69771 204 aa1.78□□□□□ -2.12
CTK2YJL006C YML108WQ03759 105 aa1.78□□□□□ -2.12
CTK2YJL006C USB1Q12208 290 aaKnown RBP1.78□□□□□ -2.12
CTK2YJL006C CDC8P00572 216 aa1.77□□□□□ -2.13
CTK2YJL006C HTB1P02293 131 aaKnown RBP1.77□□□□□ -2.13
CTK2YJL006C HTB2P02294 131 aa1.77□□□□□ -2.13
CTK2YJL006C MATALPHA2P0CY08 210 aa1.77□□□□□ -2.13
CTK2YJL006C HMLALPHA2P0CY09 210 aa1.77□□□□□ -2.13
CTK2YJL006C MER1P16523 270 aa1.77□□□□□ -2.13
CTK2YJL006C MDH2P22133 377 aa1.77□□□□□ -2.13
CTK2YJL006C PRX1P34227 261 aaKnown RBP1.77□□□□□ -2.13
CTK2YJL006C TAF14P35189 244 aa1.77□□□□□ -2.13
CTK2YJL006C YRB2P40517 327 aa1.77□□□□□ -2.13
CTK2YJL006C NUP57P48837 541 aa1.77□□□□□ -2.13
CTK2YJL006C ALG13P53178 202 aa1.77□□□□□ -2.13
CTK2YJL006C YNR062CP53748 327 aa1.77□□□□□ -2.13
CTK2YJL006C YDR157WA0A023PZE8 133 aa1.76□□□□□ -2.13
CTK2YJL006C RPL27AP0C2H6 136 aaKnown RBP1.76□□□□□ -2.13
CTK2YJL006C RPL27BP0C2H7 136 aaKnown RBP1.76□□□□□ -2.13
CTK2YJL006C DDI2P0CH63 225 aa1.76□□□□□ -2.13
CTK2YJL006C DDI3P0CH64 225 aa1.76□□□□□ -2.13
CTK2YJL006C URA6P15700 204 aa1.76□□□□□ -2.13
CTK2YJL006C CBF1P17106 351 aa1.76□□□□□ -2.13
CTK2YJL006C DSE2P38844 325 aa1.76□□□□□ -2.13
CTK2YJL006C IKI1P38874 309 aa1.76□□□□□ -2.13
CTK2YJL006C BRR6P53062 197 aa1.76□□□□□ -2.13
CTK2YJL006C GET1P53192 235 aa1.76□□□□□ -2.13
CTK2YJL006C YNL010WP53981 241 aaKnown RBP1.76□□□□□ -2.13
CTK2YJL006C YMD8Q03697 442 aa1.76□□□□□ -2.13
CTK2YJL006C ABP140Q08641 628 aaKnown RBP1.76□□□□□ -2.13
CTK2YJL006C PSF1Q12488 208 aa1.76□□□□□ -2.13
CTK2YJL006C RRP5Q05022 1729 aaKnown RBP1.76□□□□□ -2.13
CTK2YJL006C RFA3P26755 122 aaKnown RBP1.75□□□□□ -2.13
CTK2YJL006C ASF2P32448 525 aaPredicted RBP1.75□□□□□ -2.13
CTK2YJL006C SVP26P38869 228 aa1.75□□□□□ -2.13
CTK2YJL006C PRM10P42946 383 aa1.75□□□□□ -2.13
CTK2YJL006C IRC18P47056 224 aa1.75□□□□□ -2.13
CTK2YJL006C BXI1P48558 297 aa1.75□□□□□ -2.13
CTK2YJL006C LSO2Q3E772 92 aaKnown RBP1.75□□□□□ -2.13
CTK2YJL006C PET9P18239 318 aaKnown RBP1.74□□□□□ -2.13
CTK2YJL006C SRY1P36007 326 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 70.2 ms