RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W SDC1Q03323 175 aa2.98□□□□□ -1.93
BCD1YHR040W PRP11Q07350 266 aaPredicted RBP2.98□□□□□ -1.93
BCD1YHR040W YPD1Q07688 167 aa2.98□□□□□ -1.93
BCD1YHR040W YRA1Q12159 226 aaKnown RBP2.98□□□□□ -1.93
BCD1YHR040W YCT1Q12235 531 aa2.98□□□□□ -1.93
BCD1YHR040W FRE7Q12333 620 aa2.98□□□□□ -1.93
BCD1YHR040W HMS1Q12398 434 aa2.98□□□□□ -1.93
BCD1YHR040W PAA1Q12447 191 aaKnown RBP2.98□□□□□ -1.93
BCD1YHR040W YLR146W-AQ2V2P1 62 aa2.98□□□□□ -1.93
BCD1YHR040W YGL194C-AQ2V2P6 80 aa2.98□□□□□ -1.93
BCD1YHR040W SPO24Q3E752 67 aa2.98□□□□□ -1.93
BCD1YHR040W YHR214C-EQ8TGK0 99 aa2.98□□□□□ -1.93
BCD1YHR040W UBA3Q99344 299 aa2.98□□□□□ -1.93
BCD1YHR040W QCR2P07257 368 aa2.97□□□□□ -1.93
BCD1YHR040W RPL30P14120 105 aaKnown RBP2.97□□□□□ -1.93
BCD1YHR040W YCR007CP25354 239 aa2.97□□□□□ -1.93
BCD1YHR040W COS9P36034 407 aa2.97□□□□□ -1.93
BCD1YHR040W CBT1P36038 271 aaPredicted RBP2.97□□□□□ -1.93
BCD1YHR040W POP8P38208 133 aa2.97□□□□□ -1.93
BCD1YHR040W YBR292CP38357 123 aa2.97□□□□□ -1.93
BCD1YHR040W GRE3P38715 327 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
BCD1YHR040W RTC3P38804 111 aaPredicted RBP2.97□□□□□ -1.93
BCD1YHR040W PAC2P39937 518 aa2.97□□□□□ -1.93
BCD1YHR040W YER085CP40058 173 aa2.97□□□□□ -1.93
BCD1YHR040W POG1P40473 351 aa2.97□□□□□ -1.93
BCD1YHR040W YIR035CP40579 254 aa2.97□□□□□ -1.93
BCD1YHR040W MOB2P43563 287 aa2.97□□□□□ -1.93
BCD1YHR040W TAD2P47058 250 aa2.97□□□□□ -1.93
BCD1YHR040W HAM1P47119 197 aaKnown RBP2.97□□□□□ -1.93
BCD1YHR040W YGL159WP53110 370 aa2.97□□□□□ -1.93
BCD1YHR040W NRM1P53718 249 aa2.97□□□□□ -1.93
BCD1YHR040W GPI15P53961 229 aa2.97□□□□□ -1.93
BCD1YHR040W HHT1P61830 136 aa2.97□□□□□ -1.93
BCD1YHR040W YCL001W-AP87012 153 aa2.97□□□□□ -1.93
BCD1YHR040W MRP51Q02950 344 aa2.97□□□□□ -1.93
BCD1YHR040W RSM10Q03201 203 aa2.97□□□□□ -1.93
BCD1YHR040W GIS1Q03833 894 aa2.97□□□□□ -1.93
BCD1YHR040W CAC2Q04199 468 aa2.97□□□□□ -1.93
BCD1YHR040W MIX14Q04341 121 aa2.97□□□□□ -1.93
BCD1YHR040W RTT103Q05543 409 aa2.97□□□□□ -1.93
BCD1YHR040W SYM1Q06563 197 aa2.97□□□□□ -1.93
BCD1YHR040W RFU1Q08003 200 aa2.97□□□□□ -1.93
BCD1YHR040W RDL1Q12305 139 aaKnown RBP2.97□□□□□ -1.93
BCD1YHR040W TFC7Q12415 435 aa2.97□□□□□ -1.93
BCD1YHR040W CBP6P07253 162 aaPredicted RBP2.96□□□□□ -1.94
BCD1YHR040W SGA1P08019 549 aa2.96□□□□□ -1.94
BCD1YHR040W AQY1P0CD91 305 aa2.96□□□□□ -1.94
BCD1YHR040W YLL053CP0CD98 152 aa2.96□□□□□ -1.94
BCD1YHR040W RPS16AP0CX51 143 aaKnown RBP2.96□□□□□ -1.94
BCD1YHR040W RPS16BP0CX52 143 aaKnown RBP2.96□□□□□ -1.94
BCD1YHR040W MIR1P23641 311 aaKnown RBP2.96□□□□□ -1.94
BCD1YHR040W DEG1P31115 442 aaKnown RBP2.96□□□□□ -1.94
BCD1YHR040W ARO4P32449 370 aaKnown RBP2.96□□□□□ -1.94
BCD1YHR040W RAD23P32628 398 aaKnown RBP2.96□□□□□ -1.94
BCD1YHR040W ERV15P38312 142 aa2.96□□□□□ -1.94
BCD1YHR040W YMR262WP38430 313 aa2.96□□□□□ -1.94
BCD1YHR040W IKI1P38874 309 aa2.96□□□□□ -1.94
BCD1YHR040W PRM5P40476 318 aa2.96□□□□□ -1.94
BCD1YHR040W YIL029CP40538 142 aa2.96□□□□□ -1.94
BCD1YHR040W EMC5P40540 141 aa2.96□□□□□ -1.94
BCD1YHR040W SNN1P48232 102 aa2.96□□□□□ -1.94
BCD1YHR040W ERG25P53045 309 aa2.96□□□□□ -1.94
BCD1YHR040W NSA1P53136 463 aaPredicted RBP2.96□□□□□ -1.94
BCD1YHR040W TIM21P53220 239 aa2.96□□□□□ -1.94
BCD1YHR040W YIF1P53845 314 aaKnown RBP2.96□□□□□ -1.94
BCD1YHR040W APJ1P53940 528 aa2.96□□□□□ -1.94
BCD1YHR040W MRPS17Q03246 237 aaPredicted RBP2.96□□□□□ -1.94
BCD1YHR040W ERP1Q05359 219 aaKnown RBP2.96□□□□□ -1.94
BCD1YHR040W SDO1Q07953 250 aaKnown RBP2.96□□□□□ -1.94
BCD1YHR040W ATP14Q12349 124 aa2.96□□□□□ -1.94
BCD1YHR040W CDC28P00546 298 aaKnown RBP2.95□□□□□ -1.94
BCD1YHR040W TPI1P00942 248 aaKnown RBP2.95□□□□□ -1.94
BCD1YHR040W RPL25P04456 142 aaKnown RBP2.95□□□□□ -1.94
BCD1YHR040W GDH1P07262 454 aaKnown RBP2.95□□□□□ -1.94
BCD1YHR040W RPL18AP0CX49 186 aaKnown RBP2.95□□□□□ -1.94
BCD1YHR040W RPL18BP0CX50 186 aaKnown RBP2.95□□□□□ -1.94
BCD1YHR040W CNB1P25296 175 aa2.95□□□□□ -1.94
BCD1YHR040W PEX4P29340 183 aa2.95□□□□□ -1.94
BCD1YHR040W EMP24P32803 203 aaKnown RBP2.95□□□□□ -1.94
BCD1YHR040W YKL162CP36052 402 aa2.95□□□□□ -1.94
BCD1YHR040W UTH1P36135 365 aa2.95□□□□□ -1.94
BCD1YHR040W MRPL39P36533 70 aa2.95□□□□□ -1.94
BCD1YHR040W ARC40P38328 384 aaKnown RBP2.95□□□□□ -1.94
BCD1YHR040W PRS2P38620 318 aaKnown RBP2.95□□□□□ -1.94
BCD1YHR040W SPC25P40014 221 aa2.95□□□□□ -1.94
BCD1YHR040W CCS1P40202 249 aaKnown RBP2.95□□□□□ -1.94
BCD1YHR040W PGD1P40356 397 aa2.95□□□□□ -1.94
BCD1YHR040W XBP1P40489 647 aa2.95□□□□□ -1.94
BCD1YHR040W ECO1P43605 281 aa2.95□□□□□ -1.94
BCD1YHR040W MOG1P47123 218 aa2.95□□□□□ -1.94
BCD1YHR040W SSN8P47821 323 aa2.95□□□□□ -1.94
BCD1YHR040W SOL1P50278 321 aa2.95□□□□□ -1.94
BCD1YHR040W PCP1P53259 346 aa2.95□□□□□ -1.94
BCD1YHR040W YNR066CP53752 436 aa2.95□□□□□ -1.94
BCD1YHR040W BUD25P85052 153 aa2.95□□□□□ -1.94
BCD1YHR040W YPL067CQ02754 198 aa2.95□□□□□ -1.94
BCD1YHR040W YDR102CQ03864 110 aa2.95□□□□□ -1.94
BCD1YHR040W YDR391CQ04170 232 aa2.95□□□□□ -1.94
BCD1YHR040W FIT1Q04433 528 aa2.95□□□□□ -1.94
BCD1YHR040W YMR254CQ04838 102 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 71 ms