RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	CFT1	Q06632	1357 aa	Known RBP	0.89	□□□□□ -2.27
SPO11	YHL022C	MDM35	O60200	86 aa		0.89	□□□□□ -2.27
SPO11	YHL022C	RPL27A	P0C2H6	136 aa	Known RBP	0.89	□□□□□ -2.27
SPO11	YHL022C	RPB3	P16370	318 aa	Known RBP	0.88	□□□□□ -2.27
SPO11	YHL022C	VMA6	P32366	345 aa	Known RBP	0.88	□□□□□ -2.27
SPO11	YHL022C	PTM1	P32857	523 aa		0.88	□□□□□ -2.27
SPO11	YHL022C	ALG13	P53178	202 aa		0.88	□□□□□ -2.27
SPO11	YHL022C	ATP15	P21306	62 aa		0.87	□□□□□ -2.27
SPO11	YHL022C	YFH7	P43591	353 aa		0.87	□□□□□ -2.27
SPO11	YHL022C	RRN5	Q02983	363 aa		0.87	□□□□□ -2.27
SPO11	YHL022C	YMR252C	Q04814	134 aa		0.87	□□□□□ -2.27
SPO11	YHL022C	YPR174C	Q06616	221 aa	Predicted RBP	0.87	□□□□□ -2.27
SPO11	YHL022C	RHO1	P06780	209 aa	Known RBP	0.86	□□□□□ -2.27
SPO11	YHL022C	YRA1	Q12159	226 aa	Known RBP	0.86	□□□□□ -2.27
SPO11	YHL022C	CDC36	P06100	191 aa	Predicted RBP	0.85	□□□□□ -2.27
SPO11	YHL022C	YMR31	P19955	123 aa		0.85	□□□□□ -2.27
SPO11	YHL022C	MAG1	P22134	296 aa	Known RBP	0.85	□□□□□ -2.27
SPO11	YHL022C	RPL24B	P24000	155 aa	Known RBP	0.85	□□□□□ -2.27
SPO11	YHL022C	ECM4	P36156	370 aa		0.85	□□□□□ -2.27
SPO11	YHL022C	LCL2	Q08045	131 aa		0.85	□□□□□ -2.27
SPO11	YHL022C	YFR032C-B	Q8TGU2	87 aa		0.85	□□□□□ -2.27
SPO11	YHL022C	IKI3	Q06706	1349 aa	Known RBP	0.85	□□□□□ -2.27
SPO11	YHL022C	RPL28	P02406	149 aa	Known RBP	0.84	□□□□□ -2.27
SPO11	YHL022C	SPO13	P23624	291 aa		0.84	□□□□□ -2.27
SPO11	YHL022C	YPL073C	P40323	161 aa		0.84	□□□□□ -2.27
SPO11	YHL022C	SEY1	Q99287	776 aa		0.84	□□□□□ -2.27
SPO11	YHL022C	ODC2	Q99297	307 aa		0.84	□□□□□ -2.27
SPO11	YHL022C	THP2	O13539	261 aa	Known RBP	0.83	□□□□□ -2.28
SPO11	YHL022C	CKS1	P20486	150 aa	Known RBP	0.83	□□□□□ -2.28
SPO11	YHL022C	MGM101	P32787	269 aa	Known RBP	0.83	□□□□□ -2.28
SPO11	YHL022C	MIC12	P38341	106 aa		0.83	□□□□□ -2.28
SPO11	YHL022C	MPC3	P53311	146 aa		0.83	□□□□□ -2.28
SPO11	YHL022C	YHR214C-E	Q8TGK0	99 aa		0.83	□□□□□ -2.28
SPO11	YHL022C	GCN3	P14741	305 aa		0.82	□□□□□ -2.28
SPO11	YHL022C	PRX1	P34227	261 aa	Known RBP	0.82	□□□□□ -2.28
SPO11	YHL022C	HPA3	P39979	161 aa		0.82	□□□□□ -2.28
SPO11	YHL022C	YER085C	P40058	173 aa		0.82	□□□□□ -2.28
SPO11	YHL022C	LSM7	P53905	115 aa	Known RBP	0.82	□□□□□ -2.28
SPO11	YHL022C	COG5	P53951	403 aa		0.82	□□□□□ -2.28
SPO11	YHL022C	YNG1	Q08465	219 aa		0.82	□□□□□ -2.28
SPO11	YHL022C	YRB1	P41920	201 aa	Known RBP	0.81	□□□□□ -2.28
SPO11	YHL022C	DAD4	P69851	72 aa		0.81	□□□□□ -2.28
SPO11	YHL022C	DGA1	Q08650	418 aa		0.81	□□□□□ -2.28
SPO11	YHL022C	JLP1	Q12358	412 aa		0.81	□□□□□ -2.28
SPO11	YHL022C	RPL25	P04456	142 aa	Known RBP	0.8	□□□□□ -2.28
SPO11	YHL022C	YCL042W	P25572	119 aa		0.8	□□□□□ -2.28
SPO11	YHL022C	STP22	P25604	385 aa		0.8	□□□□□ -2.28
SPO11	YHL022C	RTC3	P38804	111 aa	Predicted RBP	0.8	□□□□□ -2.28
SPO11	YHL022C	TVP23	P38962	199 aa		0.8	□□□□□ -2.28
SPO11	YHL022C	MGA1	P53050	456 aa		0.8	□□□□□ -2.28
SPO11	YHL022C	PDR17	P53844	350 aa		0.8	□□□□□ -2.28
SPO11	YHL022C	YBR121C-A	P0C5L4	52 aa		0.79	□□□□□ -2.28
SPO11	YHL022C	YEL008W	P40001	126 aa		0.79	□□□□□ -2.28
SPO11	YHL022C	YEA4	P40004	342 aa		0.79	□□□□□ -2.28
SPO11	YHL022C	ADO1	P47143	340 aa	Known RBP	0.79	□□□□□ -2.28
SPO11	YHL022C	PET191	Q02772	108 aa		0.79	□□□□□ -2.28
SPO11	YHL022C	HNT1	Q04344	158 aa	Known RBP	0.79	□□□□□ -2.28
SPO11	YHL022C	YKL183C-A	Q3E765	70 aa		0.79	□□□□□ -2.28
SPO11	YHL022C	PPA2	P28239	310 aa		0.78	□□□□□ -2.28
SPO11	YHL022C	OCH1	P31755	480 aa		0.78	□□□□□ -2.28
SPO11	YHL022C	YHL018W	P38744	120 aa	Predicted RBP	0.78	□□□□□ -2.28
SPO11	YHL022C	HMF1	P40037	129 aa	Known RBP	0.78	□□□□□ -2.28
SPO11	YHL022C	IRC18	P47056	224 aa		0.78	□□□□□ -2.28
SPO11	YHL022C	AIM25	P47140	327 aa		0.78	□□□□□ -2.28
SPO11	YHL022C	POR1	P04840	283 aa	Known RBP	0.77	□□□□□ -2.29
SPO11	YHL022C	RPB7	P34087	171 aa		0.77	□□□□□ -2.29
SPO11	YHL022C	PAN3	P36102	679 aa	Predicted RBP	0.77	□□□□□ -2.29
SPO11	YHL022C	YLR460C	P54007	376 aa		0.77	□□□□□ -2.29
SPO11	YHL022C	PRP11	Q07350	266 aa	Predicted RBP	0.77	□□□□□ -2.29
SPO11	YHL022C	COA3	Q3E7B2	85 aa		0.77	□□□□□ -2.29
SPO11	YHL022C	ERG28	P40030	148 aa		0.76	□□□□□ -2.29
SPO11	YHL022C	UBC12	P52491	188 aa		0.76	□□□□□ -2.29
SPO11	YHL022C	GET1	P53192	235 aa		0.76	□□□□□ -2.29
SPO11	YHL022C	PHO85	P17157	305 aa		0.75	□□□□□ -2.29
SPO11	YHL022C	YCR090C	P25654	182 aa	Known RBP	0.75	□□□□□ -2.29
SPO11	YHL022C	TRM5	P38793	499 aa		0.75	□□□□□ -2.29
SPO11	YHL022C	MDM32	Q12171	622 aa		0.75	□□□□□ -2.29
SPO11	YHL022C	ERG10	P41338	398 aa	Known RBP	0.74	□□□□□ -2.29
SPO11	YHL022C	NCB2	Q92317	146 aa		0.74	□□□□□ -2.29
SPO11	YHL022C	COX8	P04039	78 aa		0.73	□□□□□ -2.29
SPO11	YHL022C	MER1	P16523	270 aa		0.73	□□□□□ -2.29
SPO11	YHL022C	UGX2	P32772	223 aa		0.73	□□□□□ -2.29
SPO11	YHL022C	BMH2	P34730	273 aa	Known RBP	0.73	□□□□□ -2.29
SPO11	YHL022C	RTR1	P40084	226 aa	Predicted RBP	0.73	□□□□□ -2.29
SPO11	YHL022C	OTU1	P43558	301 aa		0.73	□□□□□ -2.29
SPO11	YHL022C	DIG2	Q03373	323 aa	Known RBP	0.73	□□□□□ -2.29
SPO11	YHL022C	UPS3	Q04006	179 aa		0.73	□□□□□ -2.29
SPO11	YHL022C	YDR391C	Q04170	232 aa		0.73	□□□□□ -2.29
SPO11	YHL022C	DYN3	Q04949	312 aa		0.73	□□□□□ -2.29
SPO11	YHL022C	IRC23	Q08416	157 aa		0.73	□□□□□ -2.29
SPO11	YHL022C	FAS1	P07149	2051 aa	Known RBP	0.73	□□□□□ -2.29
SPO11	YHL022C	NHP6B	P11633	99 aa	Known RBP	0.72	□□□□□ -2.29
SPO11	YHL022C	UBC8	P28263	218 aa		0.72	□□□□□ -2.29
SPO11	YHL022C	MRPL15	P36523	253 aa		0.72	□□□□□ -2.29
SPO11	YHL022C	RNH202	Q05635	350 aa		0.72	□□□□□ -2.29
SPO11	YHL022C	FIT2	Q08906	153 aa		0.72	□□□□□ -2.29
SPO11	YHL022C	YPK2	P18961	677 aa		0.71	□□□□□ -2.3
SPO11	YHL022C	YER134C	P40081	178 aa		0.71	□□□□□ -2.3
SPO11	YHL022C	YNL194C	P40169	301 aa		0.71	□□□□□ -2.3
SPO11	YHL022C	THG1	P53215	237 aa	Known RBP	0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms