RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W MRP17P28778 131 aa5.6□□□□□ -1.51
NUP49YGL172W TCA17P32613 152 aa5.6□□□□□ -1.51
NUP49YGL172W YUH1P35127 236 aa5.6□□□□□ -1.51
NUP49YGL172W CPR5P35176 225 aa5.6□□□□□ -1.51
NUP49YGL172W PCL7P40186 285 aa5.6□□□□□ -1.51
NUP49YGL172W YFL015CP43578 164 aa5.6□□□□□ -1.51
NUP49YGL172W YNR071CP53757 342 aa5.6□□□□□ -1.51
NUP49YGL172W APJ1P53940 528 aa5.6□□□□□ -1.51
NUP49YGL172W FEX2Q08991 375 aa5.6□□□□□ -1.51
NUP49YGL172W BBP1Q12365 385 aa5.6□□□□□ -1.51
NUP49YGL172W DGK1Q12382 290 aa5.6□□□□□ -1.51
NUP49YGL172W TFC7Q12415 435 aa5.6□□□□□ -1.51
NUP49YGL172W YCR016WP25617 290 aaKnown RBP5.59□□□□□ -1.51
NUP49YGL172W SOR1P35497 357 aaKnown RBP5.59□□□□□ -1.51
NUP49YGL172W PRM5P40476 318 aa5.59□□□□□ -1.51
NUP49YGL172W RPA34P47006 233 aaPredicted RBP5.59□□□□□ -1.51
NUP49YGL172W UBP8P50102 471 aa5.59□□□□□ -1.51
NUP49YGL172W YGL114WP53134 725 aa5.59□□□□□ -1.51
NUP49YGL172W SMX3P54999 86 aaPredicted RBP5.59□□□□□ -1.51
NUP49YGL172W NGL2Q03264 515 aaKnown RBP5.59□□□□□ -1.51
NUP49YGL172W YDR415CQ04033 374 aaPredicted RBP5.59□□□□□ -1.51
NUP49YGL172W THI74Q04083 370 aa5.59□□□□□ -1.51
NUP49YGL172W PRP11Q07350 266 aaPredicted RBP5.59□□□□□ -1.51
NUP49YGL172W YFH1Q07540 174 aa5.59□□□□□ -1.51
NUP49YGL172W SOR2Q07786 357 aa5.59□□□□□ -1.51
NUP49YGL172W YOR292CQ08743 309 aa5.59□□□□□ -1.51
NUP49YGL172W YOR097CQ12274 175 aaPredicted RBP5.59□□□□□ -1.51
NUP49YGL172W HUG1Q6Q5K6 68 aa5.59□□□□□ -1.51
NUP49YGL172W GRX2P17695 143 aaKnown RBP5.58□□□□□ -1.52
NUP49YGL172W OLE1P21147 510 aaKnown RBP5.58□□□□□ -1.52
NUP49YGL172W CUE1P38428 203 aa5.58□□□□□ -1.52
NUP49YGL172W LAG1P38703 411 aa5.58□□□□□ -1.52
NUP49YGL172W BFR1P38934 470 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52 RIP-Chip
NUP49YGL172W POP2P39008 433 aa5.58□□□□□ -1.52
NUP49YGL172W MRPL22P53881 309 aa5.58□□□□□ -1.52
NUP49YGL172W ASM4Q05166 528 aa5.58□□□□□ -1.52
NUP49YGL172W FEX1Q08913 375 aa5.58□□□□□ -1.52
NUP49YGL172W ARG80P07249 177 aa5.57□□□□□ -1.52
NUP49YGL172W SAR1P20606 190 aaKnown RBP5.57□□□□□ -1.52
NUP49YGL172W LSB5P25369 354 aa5.57□□□□□ -1.52
NUP49YGL172W MRP20P32387 263 aa5.57□□□□□ -1.52
NUP49YGL172W SUA5P32579 426 aa5.57□□□□□ -1.52
NUP49YGL172W PPQ1P32945 549 aa5.57□□□□□ -1.52
NUP49YGL172W UTP30P36144 274 aaKnown RBP5.57□□□□□ -1.52
NUP49YGL172W ADH5P38113 351 aaKnown RBP5.57□□□□□ -1.52
NUP49YGL172W IKI1P38874 309 aa5.57□□□□□ -1.52
NUP49YGL172W YGR210CP42942 411 aa5.57□□□□□ -1.52
NUP49YGL172W NIF3P53081 288 aa5.57□□□□□ -1.52
NUP49YGL172W ARR2Q06597 130 aa5.57□□□□□ -1.52
NUP49YGL172W TFB5Q3E7C1 72 aaPredicted RBP5.57□□□□□ -1.52
NUP49YGL172W TPI1P00942 248 aaKnown RBP5.57□□□□□ -1.52
NUP49YGL172W RPB9P27999 122 aa5.57□□□□□ -1.52
NUP49YGL172W IRC24P40580 263 aa5.57□□□□□ -1.52
NUP49YGL172W LPP1Q04396 274 aa5.57□□□□□ -1.52
NUP49YGL172W YPD1Q07688 167 aa5.57□□□□□ -1.52
NUP49YGL172W PRM4Q12498 284 aa5.57□□□□□ -1.52
NUP49YGL172W YOS1Q3E834 85 aa5.57□□□□□ -1.52
NUP49YGL172W QCR2P07257 368 aa5.56□□□□□ -1.52
NUP49YGL172W GCN3P14741 305 aa5.56□□□□□ -1.52
NUP49YGL172W FRS1P15624 595 aaKnown RBP5.56□□□□□ -1.52
NUP49YGL172W ERG2P32352 222 aa5.56□□□□□ -1.52
NUP49YGL172W YMR317WQ04893 1140 aa5.56□□□□□ -1.52
NUP49YGL172W ADH6Q04894 360 aaKnown RBP5.56□□□□□ -1.52
NUP49YGL172W URA2P07259 2214 aaKnown RBP5.55□□□□□ -1.52
NUP49YGL172W PUT1P09368 476 aa5.55□□□□□ -1.52
NUP49YGL172W ROX3P25046 220 aa5.55□□□□□ -1.52
NUP49YGL172W CBT1P36038 271 aaPredicted RBP5.55□□□□□ -1.52
NUP49YGL172W PMU1P36069 295 aa5.55□□□□□ -1.52
NUP49YGL172W RRF1P38771 230 aa5.55□□□□□ -1.52
NUP49YGL172W YJR056CP47115 236 aa5.55□□□□□ -1.52
NUP49YGL172W YDL086WQ07505 273 aa5.55□□□□□ -1.52
NUP49YGL172W YOL029CQ08187 201 aa5.55□□□□□ -1.52
NUP49YGL172W COQ2P32378 372 aa5.54□□□□□ -1.52
NUP49YGL172W YIR035CP40579 254 aa5.54□□□□□ -1.52
NUP49YGL172W YJL118WP47022 219 aa5.54□□□□□ -1.52
NUP49YGL172W VPS28Q02767 242 aa5.54□□□□□ -1.52
NUP49YGL172W HOF1Q05080 669 aa5.54□□□□□ -1.52
NUP49YGL172W YCT1Q12235 531 aa5.54□□□□□ -1.52
NUP49YGL172W ATO3Q12359 275 aa5.54□□□□□ -1.52
NUP49YGL172W YER145C-AA0A023PYF4 145 aa5.53□□□□□ -1.52
NUP49YGL172W CCW14O13547 238 aa5.53□□□□□ -1.52
NUP49YGL172W RPL9AP05738 191 aaKnown RBP5.53□□□□□ -1.52
NUP49YGL172W RPL15AP05748 204 aaKnown RBP5.53□□□□□ -1.52
NUP49YGL172W TIP1P27654 210 aaPredicted RBP5.53□□□□□ -1.52
NUP49YGL172W ERV15P38312 142 aa5.53□□□□□ -1.52
NUP49YGL172W PEX7P39108 375 aa5.53□□□□□ -1.52
NUP49YGL172W YER188WP40103 239 aa5.53□□□□□ -1.52
NUP49YGL172W RPL15BP54780 204 aaPredicted RBP5.53□□□□□ -1.52
NUP49YGL172W MIX17Q03667 156 aa5.53□□□□□ -1.52
NUP49YGL172W TMA10Q06177 86 aa5.53□□□□□ -1.52
NUP49YGL172W HRD1Q08109 551 aa5.53□□□□□ -1.52
NUP49YGL172W FCY1Q12178 158 aa5.53□□□□□ -1.52
NUP49YGL172W BOL1Q3E793 110 aa5.53□□□□□ -1.52
NUP49YGL172W YMR31P19955 123 aa5.52□□□□□ -1.53
NUP49YGL172W ACB1P31787 87 aa5.52□□□□□ -1.53
NUP49YGL172W LSM12P38828 187 aaKnown RBP5.52□□□□□ -1.53
NUP49YGL172W YHR138CP38841 114 aaPredicted RBP5.52□□□□□ -1.53
NUP49YGL172W YER137CP40083 148 aaKnown RBP5.52□□□□□ -1.53
NUP49YGL172W YJR012CP47087 207 aa5.52□□□□□ -1.53
NUP49YGL172W RPL9BP51401 191 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms