RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W NUM1Q00402 2748 aa6.52□□□□□ -1.37
SHC1YER096W AGX1P43567 385 aa6.51□□□□□ -1.37
SHC1YER096W WSC2P53832 503 aa6.51□□□□□ -1.37
SHC1YER096W YIF1P53845 314 aaKnown RBP6.51□□□□□ -1.37
SHC1YER096W ALG14P38242 237 aa6.5□□□□□ -1.37
SHC1YER096W ERV15P38312 142 aa6.5□□□□□ -1.37
SHC1YER096W GCV3P39726 170 aaPredicted RBP6.5□□□□□ -1.37
SHC1YER096W YEA6P39953 335 aa6.5□□□□□ -1.37
SHC1YER096W MSO1P53604 210 aaKnown RBP6.5□□□□□ -1.37
SHC1YER096W GMC1Q04399 608 aa6.5□□□□□ -1.37
SHC1YER096W ERP1Q05359 219 aaKnown RBP6.5□□□□□ -1.37
SHC1YER096W BER1Q06688 274 aaKnown RBP6.5□□□□□ -1.37
SHC1YER096W DGK1Q12382 290 aa6.5□□□□□ -1.37
SHC1YER096W BOL1Q3E793 110 aa6.5□□□□□ -1.37
SHC1YER096W CPR5P35176 225 aa6.5□□□□□ -1.37
SHC1YER096W IKI1P38874 309 aa6.5□□□□□ -1.37
SHC1YER096W SUT1P53032 299 aaKnown RBP6.5□□□□□ -1.37
SHC1YER096W PKP2P53170 491 aa6.5□□□□□ -1.37
SHC1YER096W GPI15P53961 229 aa6.5□□□□□ -1.37
SHC1YER096W DID2P69771 204 aa6.5□□□□□ -1.37
SHC1YER096W YFH1Q07540 174 aa6.5□□□□□ -1.37
SHC1YER096W YBR085C-AO43137 85 aa6.49□□□□□ -1.37
SHC1YER096W DBP2P24783 546 aaKnown RBP6.49□□□□□ -1.37
SHC1YER096W ROX3P25046 220 aa6.49□□□□□ -1.37
SHC1YER096W RPD3P32561 433 aa6.49□□□□□ -1.37
SHC1YER096W YKL162CP36052 402 aa6.49□□□□□ -1.37
SHC1YER096W LSM12P38828 187 aaKnown RBP6.49□□□□□ -1.37
SHC1YER096W ASP1P38986 381 aaPredicted RBP6.49□□□□□ -1.37
SHC1YER096W SWM2P40342 146 aa6.49□□□□□ -1.37
SHC1YER096W YIL012WP40551 113 aa6.49□□□□□ -1.37
SHC1YER096W HOF1Q05080 669 aa6.49□□□□□ -1.37
SHC1YER096W ISN1Q99312 450 aa6.49□□□□□ -1.37
SHC1YER096W GAR1P28007 205 aaKnown RBP6.48□□□□□ -1.37
SHC1YER096W COQ2P32378 372 aa6.48□□□□□ -1.37
SHC1YER096W SGN1P40561 250 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
SHC1YER096W GEP7P53171 287 aa6.48□□□□□ -1.37
SHC1YER096W CRH1P53301 507 aa6.48□□□□□ -1.37
SHC1YER096W PML1Q07930 204 aaPredicted RBP6.48□□□□□ -1.37
SHC1YER096W YCR025CP25352 136 aa6.47□□□□□ -1.37
SHC1YER096W LSB5P25369 354 aa6.47□□□□□ -1.37
SHC1YER096W NCA3P46955 337 aa6.47□□□□□ -1.37
SHC1YER096W UBC12P52491 188 aa6.47□□□□□ -1.37
SHC1YER096W TIM10P87108 93 aa6.47□□□□□ -1.37
SHC1YER096W YMR082CQ04276 118 aa6.47□□□□□ -1.37
SHC1YER096W AIM45Q12480 344 aaKnown RBP6.47□□□□□ -1.37
SHC1YER096W GDH1P07262 454 aaKnown RBP6.46□□□□□ -1.37
SHC1YER096W UBI4P0CG63 381 aaKnown RBP6.46□□□□□ -1.37
SHC1YER096W ATP10P18496 279 aa6.46□□□□□ -1.37
SHC1YER096W ERV1P27882 189 aa6.46□□□□□ -1.37
SHC1YER096W ARP3P47117 449 aaKnown RBP6.46□□□□□ -1.37
SHC1YER096W TTI2P47168 421 aa6.46□□□□□ -1.37
SHC1YER096W PHO23P50947 330 aa6.46□□□□□ -1.37
SHC1YER096W TIM44Q01852 431 aa6.46□□□□□ -1.37
SHC1YER096W YOL029CQ08187 201 aa6.46□□□□□ -1.37
SHC1YER096W SPS18P32572 300 aa6.45□□□□□ -1.38
SHC1YER096W RPL13BP40212 199 aaKnown RBP6.45□□□□□ -1.38
SHC1YER096W DFG10P40526 253 aa6.45□□□□□ -1.38
SHC1YER096W BUL1P48524 976 aa6.45□□□□□ -1.38
SHC1YER096W YNR064CP53750 290 aa6.45□□□□□ -1.38
SHC1YER096W HED1Q03937 162 aa6.45□□□□□ -1.38
SHC1YER096W ECM18Q04623 453 aa6.45□□□□□ -1.38
SHC1YER096W YPL264CQ08980 353 aa6.45□□□□□ -1.38
SHC1YER096W USV1Q12132 391 aa6.45□□□□□ -1.38
SHC1YER096W YDL009CQ12210 107 aa6.45□□□□□ -1.38
SHC1YER096W RPL13AQ12690 199 aaPredicted RBP6.45□□□□□ -1.38
SHC1YER096W Q0297Q9ZZV8 51 aa6.45□□□□□ -1.38
SHC1YER096W YMR31P19955 123 aa6.45□□□□□ -1.38
SHC1YER096W ADH5P38113 351 aaKnown RBP6.45□□□□□ -1.38
SHC1YER096W SLM6P38343 150 aa6.45□□□□□ -1.38
SHC1YER096W YIR020CP40575 100 aa6.45□□□□□ -1.38
SHC1YER096W YJL118WP47022 219 aa6.45□□□□□ -1.38
SHC1YER096W SBH2P52871 88 aa6.45□□□□□ -1.38
SHC1YER096W YGR050CP53231 118 aa6.45□□□□□ -1.38
SHC1YER096W APJ1P53940 528 aa6.45□□□□□ -1.38
SHC1YER096W LPP1Q04396 274 aa6.45□□□□□ -1.38
SHC1YER096W HRD1Q08109 551 aa6.45□□□□□ -1.38
SHC1YER096W YOS1Q3E834 85 aa6.45□□□□□ -1.38
SHC1YER096W SMM1P53720 384 aaKnown RBP6.44□□□□□ -1.38
SHC1YER096W ODC1Q03028 310 aa6.44□□□□□ -1.38
SHC1YER096W FSH2Q05015 223 aa6.44□□□□□ -1.38
SHC1YER096W PRP11Q07350 266 aaPredicted RBP6.44□□□□□ -1.38
SHC1YER096W PAM18Q07914 168 aa6.44□□□□□ -1.38
SHC1YER096W FCF2Q12035 217 aaPredicted RBP6.44□□□□□ -1.38
SHC1YER096W MET32Q12041 191 aa6.44□□□□□ -1.38
SHC1YER096W RDL1Q12305 139 aaKnown RBP6.44□□□□□ -1.38
SHC1YER096W PRR2Q12310 699 aa6.44□□□□□ -1.38
SHC1YER096W TY1A-DR3Q12441 440 aa6.44□□□□□ -1.38
SHC1YER096W RPP1AP05318 106 aaPredicted RBP6.43□□□□□ -1.38
SHC1YER096W RPL9AP05738 191 aaKnown RBP6.43□□□□□ -1.38
SHC1YER096W SIP1P32578 815 aa6.43□□□□□ -1.38
SHC1YER096W IES6P32617 166 aa6.43□□□□□ -1.38
SHC1YER096W SOR1P35497 357 aaKnown RBP6.43□□□□□ -1.38
SHC1YER096W GPI18P38211 433 aa6.43□□□□□ -1.38
SHC1YER096W YEA4P40004 342 aa6.43□□□□□ -1.38
SHC1YER096W GZF3P42944 551 aaKnown RBP6.43□□□□□ -1.38
SHC1YER096W HCH1P53834 153 aa6.43□□□□□ -1.38
SHC1YER096W YNL234WP53857 426 aa6.43□□□□□ -1.38
SHC1YER096W ERV25P54837 211 aaKnown RBP6.43□□□□□ -1.38
SHC1YER096W YMR090WQ04304 227 aaKnown RBP6.43□□□□□ -1.38
SHC1YER096W TDA6Q06466 467 aa6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms