RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W ACL4Q03771 387 aa1.89□□□□□ -2.11
VPS41YDR080W BCP1Q06338 283 aa1.89□□□□□ -2.11
VPS41YDR080W RPL25P04456 142 aaKnown RBP1.89□□□□□ -2.11
VPS41YDR080W CPR4P25334 318 aa1.89□□□□□ -2.11
VPS41YDR080W MIX23P38162 196 aa1.89□□□□□ -2.11
VPS41YDR080W COX15P40086 486 aa1.89□□□□□ -2.11
VPS41YDR080W RRG9P40156 214 aa1.89□□□□□ -2.11
VPS41YDR080W DIE2P50076 525 aa1.89□□□□□ -2.11
VPS41YDR080W YGR219WP53307 113 aa1.89□□□□□ -2.11
VPS41YDR080W PBA1Q05778 276 aa1.89□□□□□ -2.11
VPS41YDR080W MSC3Q05812 728 aa1.89□□□□□ -2.11
VPS41YDR080W MDM36Q06820 579 aa1.89□□□□□ -2.11
VPS41YDR080W YOR186WQ08560 144 aa1.89□□□□□ -2.11
VPS41YDR080W FRE6Q12473 712 aa1.89□□□□□ -2.11
VPS41YDR080W STF2P16965 84 aa1.88□□□□□ -2.11
VPS41YDR080W UTP30P36144 274 aaKnown RBP1.88□□□□□ -2.11
VPS41YDR080W SRL3P36167 246 aa1.88□□□□□ -2.11
VPS41YDR080W NTC20P38302 140 aaPredicted RBP1.88□□□□□ -2.11
VPS41YDR080W PHB2P50085 310 aa1.88□□□□□ -2.11
VPS41YDR080W TSA2Q04120 196 aa1.88□□□□□ -2.11
VPS41YDR080W SPC2Q04969 178 aa1.88□□□□□ -2.11
VPS41YDR080W YPD1Q07688 167 aa1.88□□□□□ -2.11
VPS41YDR080W RBD2Q12270 262 aa1.88□□□□□ -2.11
VPS41YDR080W PST2Q12335 198 aaKnown RBP1.88□□□□□ -2.11
VPS41YDR080W ATO3Q12359 275 aa1.88□□□□□ -2.11
VPS41YDR080W RPL31BP0C2H9 113 aaKnown RBP1.88□□□□□ -2.11
VPS41YDR080W RPL3P14126 387 aaKnown RBP1.88□□□□□ -2.11
VPS41YDR080W OCH1P31755 480 aa1.88□□□□□ -2.11
VPS41YDR080W YBR285WP38354 144 aa1.88□□□□□ -2.11
VPS41YDR080W TIR3P40552 269 aa1.88□□□□□ -2.11
VPS41YDR080W RMR1P53060 241 aa1.88□□□□□ -2.11
VPS41YDR080W VOA1P53262 265 aa1.88□□□□□ -2.11
VPS41YDR080W HSK3P69852 69 aa1.88□□□□□ -2.11
VPS41YDR080W TLG1Q03322 224 aa1.88□□□□□ -2.11
VPS41YDR080W YMR315WQ04869 349 aaKnown RBP1.88□□□□□ -2.11
VPS41YDR080W PEX30Q06169 523 aa1.88□□□□□ -2.11
VPS41YDR080W YLR173WQ06247 608 aa1.88□□□□□ -2.11
VPS41YDR080W ASA1Q06822 443 aa1.88□□□□□ -2.11
VPS41YDR080W TFC7Q12415 435 aa1.88□□□□□ -2.11
VPS41YDR080W QCR7P00128 127 aa1.87□□□□□ -2.11
VPS41YDR080W YMR31P19955 123 aa1.87□□□□□ -2.11
VPS41YDR080W LSB5P25369 354 aa1.87□□□□□ -2.11
VPS41YDR080W ARO7P32178 256 aa1.87□□□□□ -2.11
VPS41YDR080W RCN1P36054 211 aa1.87□□□□□ -2.11
VPS41YDR080W FMP23P38231 175 aa1.87□□□□□ -2.11
VPS41YDR080W SSH1P38353 490 aaKnown RBP1.87□□□□□ -2.11
VPS41YDR080W POP2P39008 433 aa1.87□□□□□ -2.11
VPS41YDR080W YJL218WP40892 196 aaKnown RBP1.87□□□□□ -2.11
VPS41YDR080W CAF40P53829 373 aa1.87□□□□□ -2.11
VPS41YDR080W RRP17Q04031 235 aaPredicted RBP1.87□□□□□ -2.11
VPS41YDR080W HEM25Q07534 307 aa1.87□□□□□ -2.11
VPS41YDR080W YLR126CQ12288 251 aa1.87□□□□□ -2.11
VPS41YDR080W EAF3Q12432 401 aa1.87□□□□□ -2.11
VPS41YDR080W HUT1Q12520 339 aa1.87□□□□□ -2.11
VPS41YDR080W SNF4P12904 322 aa1.87□□□□□ -2.11
VPS41YDR080W NTG1P31378 399 aa1.87□□□□□ -2.11
VPS41YDR080W SEC66P33754 206 aa1.87□□□□□ -2.11
VPS41YDR080W YBL059WP34224 193 aa1.87□□□□□ -2.11
VPS41YDR080W THO1P40040 218 aaKnown RBP1.87□□□□□ -2.11
VPS41YDR080W AVT6P40074 448 aa1.87□□□□□ -2.11
VPS41YDR080W MAM33P40513 266 aa1.87□□□□□ -2.11
VPS41YDR080W YGR210CP42942 411 aa1.87□□□□□ -2.11
VPS41YDR080W GNA1P43577 159 aaPredicted RBP1.87□□□□□ -2.11
VPS41YDR080W BNA6P43619 295 aa1.87□□□□□ -2.11
VPS41YDR080W POP6P53218 158 aa1.87□□□□□ -2.11
VPS41YDR080W ODC1Q03028 310 aa1.87□□□□□ -2.11
VPS41YDR080W MRP1P10662 321 aaKnown RBP1.86□□□□□ -2.11
VPS41YDR080W PRP21P32524 280 aaPredicted RBP1.86□□□□□ -2.11
VPS41YDR080W YHK8P38776 514 aa1.86□□□□□ -2.11
VPS41YDR080W AGX1P43567 385 aa1.86□□□□□ -2.11
VPS41YDR080W PAU12P53343 120 aa1.86□□□□□ -2.11
VPS41YDR080W COX12Q01519 83 aa1.86□□□□□ -2.11
VPS41YDR080W YLR345WQ06137 509 aa1.86□□□□□ -2.11
VPS41YDR080W YNG1Q08465 219 aa1.86□□□□□ -2.11
VPS41YDR080W FCY1Q12178 158 aa1.86□□□□□ -2.11
VPS41YDR080W DFR1P07807 211 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
VPS41YDR080W RFA3P26755 122 aaKnown RBP1.86□□□□□ -2.11
VPS41YDR080W TRM5P38793 499 aa1.86□□□□□ -2.11
VPS41YDR080W RPL9BP51401 191 aaKnown RBP1.86□□□□□ -2.11
VPS41YDR080W FIT1Q04433 528 aa1.86□□□□□ -2.11
VPS41YDR080W PEX10Q05568 337 aa1.86□□□□□ -2.11
VPS41YDR080W RAD28Q12021 506 aa1.86□□□□□ -2.11
VPS41YDR080W JID1Q12350 301 aa1.86□□□□□ -2.11
VPS41YDR080W ADF1Q2V2Q1 113 aa1.86□□□□□ -2.11
VPS41YDR080W SNC2P33328 115 aa1.86□□□□□ -2.11
VPS41YDR080W MED8P38304 223 aa1.86□□□□□ -2.11
VPS41YDR080W IKI1P38874 309 aa1.86□□□□□ -2.11
VPS41YDR080W ATG18P43601 500 aa1.86□□□□□ -2.11
VPS41YDR080W SAY1P53324 424 aa1.86□□□□□ -2.11
VPS41YDR080W YDR286CQ05530 114 aa1.86□□□□□ -2.11
VPS41YDR080W PET54P10834 293 aa1.85□□□□□ -2.11
VPS41YDR080W IFM1P25038 676 aa1.85□□□□□ -2.11
VPS41YDR080W YUH1P35127 236 aa1.85□□□□□ -2.11
VPS41YDR080W ECM33P38248 429 aaKnown RBP1.85□□□□□ -2.11
VPS41YDR080W MST28P39552 234 aa1.85□□□□□ -2.11
VPS41YDR080W GAT4P40569 121 aa1.85□□□□□ -2.11
VPS41YDR080W MRPL49P40858 161 aaPredicted RBP1.85□□□□□ -2.11
VPS41YDR080W YGL262WP53054 175 aa1.85□□□□□ -2.11
VPS41YDR080W ALG13P53178 202 aa1.85□□□□□ -2.11
VPS41YDR080W LPP1Q04396 274 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms