RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	CKS1	P20486	150 aa	Known RBP	4.17	□□□□□ -1.74
SNF11	YDR073W	BET1	P22804	142 aa		4.17	□□□□□ -1.74
SNF11	YDR073W	YKL102C	P34249	101 aa		4.17	□□□□□ -1.74
SNF11	YDR073W	TVP38	P36164	337 aa		4.17	□□□□□ -1.74
SNF11	YDR073W	AIM2	P39721	246 aa		4.17	□□□□□ -1.74
SNF11	YDR073W	TIF34	P40217	347 aa	Known RBP	4.17	□□□□□ -1.74
SNF11	YDR073W	TMA20	P89886	181 aa	Predicted RBP	4.17	□□□□□ -1.74
SNF11	YDR073W	RSM10	Q03201	203 aa		4.17	□□□□□ -1.74
SNF11	YDR073W	YDR249C	Q03787	373 aa		4.17	□□□□□ -1.74
SNF11	YDR073W	PIN3	Q06449	215 aa		4.17	□□□□□ -1.74
SNF11	YDR073W	EFG1	Q3E705	233 aa	Known RBP	4.17	□□□□□ -1.74
SNF11	YDR073W	URA5	P13298	226 aa	Known RBP	4.16	□□□□□ -1.74
SNF11	YDR073W	YCR023C	P25351	611 aa		4.16	□□□□□ -1.74
SNF11	YDR073W	SEC17	P32602	292 aa		4.16	□□□□□ -1.74
SNF11	YDR073W	YHR125W	P38831	101 aa		4.16	□□□□□ -1.74
SNF11	YDR073W	YPR063C	Q12160	140 aa		4.16	□□□□□ -1.74
SNF11	YDR073W	MPD1	Q12404	318 aa	Known RBP	4.16	□□□□□ -1.74
SNF11	YDR073W	RPB3	P16370	318 aa	Known RBP	4.15	□□□□□ -1.75
SNF11	YDR073W	TKL2	P33315	681 aa		4.15	□□□□□ -1.75
SNF11	YDR073W	MOG1	P47123	218 aa		4.15	□□□□□ -1.75
SNF11	YDR073W	PGA1	P53896	198 aa		4.15	□□□□□ -1.75
SNF11	YDR073W	HSK3	P69852	69 aa		4.15	□□□□□ -1.75
SNF11	YDR073W	YOR1	P53049	1477 aa		4.15	□□□□□ -1.75
SNF11	YDR073W	NUF2	P33895	451 aa		4.14	□□□□□ -1.75
SNF11	YDR073W	YER188W	P40103	239 aa		4.14	□□□□□ -1.75
SNF11	YDR073W	GON7	P46984	123 aa		4.14	□□□□□ -1.75
SNF11	YDR073W	YJR111C	P47148	283 aa	Known RBP	4.14	□□□□□ -1.75
SNF11	YDR073W	MCP1	Q12106	302 aa		4.14	□□□□□ -1.75
SNF11	YDR073W	Q0255	P03881	472 aa		4.13	□□□□□ -1.75
SNF11	YDR073W	RPL9A	P05738	191 aa	Known RBP	4.13	□□□□□ -1.75
SNF11	YDR073W	SLM6	P38343	150 aa		4.13	□□□□□ -1.75
SNF11	YDR073W	MED6	P38782	295 aa		4.13	□□□□□ -1.75
SNF11	YDR073W	AVT2	P39981	480 aa		4.13	□□□□□ -1.75
SNF11	YDR073W	SKI6	P46948	246 aa	Predicted RBP	4.13	□□□□□ -1.75
SNF11	YDR073W	RPL9B	P51401	191 aa	Known RBP	4.13	□□□□□ -1.75
SNF11	YDR073W	YGR042W	P53227	271 aa		4.13	□□□□□ -1.75
SNF11	YDR073W	APJ1	P53940	528 aa		4.13	□□□□□ -1.75
SNF11	YDR073W	SWP1	Q02795	286 aa		4.13	□□□□□ -1.75
SNF11	YDR073W	PSF1	Q12488	208 aa		4.13	□□□□□ -1.75
SNF11	YDR073W	TSC3	Q3E790	80 aa		4.13	□□□□□ -1.75
SNF11	YDR073W	CDC8	P00572	216 aa		4.12	□□□□□ -1.75
SNF11	YDR073W	REP2	P03872	296 aa		4.12	□□□□□ -1.75
SNF11	YDR073W	HIS3	P06633	220 aa		4.12	□□□□□ -1.75
SNF11	YDR073W	LDB16	P25587	256 aa		4.12	□□□□□ -1.75
SNF11	YDR073W	FMP23	P38231	175 aa		4.12	□□□□□ -1.75
SNF11	YDR073W	YGR026W	P53217	278 aa		4.12	□□□□□ -1.75
SNF11	YDR073W	YOR342C	Q12182	319 aa		4.12	□□□□□ -1.75
SNF11	YDR073W	SAS5	Q99314	248 aa		4.12	□□□□□ -1.75
SNF11	YDR073W	PDR18	P53756	1333 aa		4.12	□□□□□ -1.75
SNF11	YDR073W	VMA11	P32842	164 aa		4.11	□□□□□ -1.75
SNF11	YDR073W	YGL204C	P53089	101 aa		4.11	□□□□□ -1.75
SNF11	YDR073W	PBI2	P0CT04	75 aa	Known RBP	4.1	□□□□□ -1.75
SNF11	YDR073W	MRPS28	P21771	286 aa		4.1	□□□□□ -1.75
SNF11	YDR073W	IDP1	P21954	428 aa	Known RBP	4.1	□□□□□ -1.75
SNF11	YDR073W	UBC8	P28263	218 aa		4.1	□□□□□ -1.75
SNF11	YDR073W	UPS2	P35200	230 aa		4.1	□□□□□ -1.75
SNF11	YDR073W	YKR032W	P36127	104 aa		4.1	□□□□□ -1.75
SNF11	YDR073W	BUD13	P46947	266 aa	Predicted RBP	4.1	□□□□□ -1.75
SNF11	YDR073W	DSK2	P48510	373 aa		4.1	□□□□□ -1.75
SNF11	YDR073W	ECM11	Q04110	302 aa		4.1	□□□□□ -1.75
SNF11	YDR073W	TRM12	Q04235	462 aa		4.1	□□□□□ -1.75
SNF11	YDR073W	TAF2	P23255	1407 aa		4.1	□□□□□ -1.75
SNF11	YDR073W	YHR032W-A	P0C5N6	59 aa		4.09	□□□□□ -1.75
SNF11	YDR073W	RFC2	P40348	353 aa		4.09	□□□□□ -1.75
SNF11	YDR073W	YGL088W	P53151	121 aa		4.09	□□□□□ -1.75
SNF11	YDR073W	PKR1	Q03880	122 aa	Known RBP	4.09	□□□□□ -1.75
SNF11	YDR073W	FKS1	P38631	1876 aa	Known RBP	4.09	□□□□□ -1.76
SNF11	YDR073W	CCA1	P21269	546 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	SPO13	P23624	291 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	PEX34	P25584	144 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	OCH1	P31755	480 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	CYC2	P38909	366 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	YIR035C	P40579	254 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	SER2	P42941	309 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	MNN5	P46982	586 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	GPI14	P47088	403 aa	Known RBP	4.08	□□□□□ -1.76
SNF11	YDR073W	TDA4	P47153	279 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	YGL101W	P53144	215 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	YOR268C	Q08734	132 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	YPR202W	Q08993	238 aa		4.08	□□□□□ -1.76
SNF11	YDR073W	YIL059C	P40520	121 aa		4.07	□□□□□ -1.76
SNF11	YDR073W	YDR114C	Q04597	100 aa		4.07	□□□□□ -1.76
SNF11	YDR073W	YOL014W	Q08110	124 aa		4.07	□□□□□ -1.76
SNF11	YDR073W	IES4	Q08561	116 aa		4.07	□□□□□ -1.76
SNF11	YDR073W	AKR2	Q12013	749 aa		4.07	□□□□□ -1.76
SNF11	YDR073W	YLR046C	Q12253	270 aa		4.07	□□□□□ -1.76
SNF11	YDR073W	YML100W-A	Q8TGT0	57 aa		4.07	□□□□□ -1.76
SNF11	YDR073W	TIM9	O74700	87 aa		4.06	□□□□□ -1.76
SNF11	YDR073W	ATP15	P21306	62 aa		4.06	□□□□□ -1.76
SNF11	YDR073W	NSG1	P38837	291 aa		4.06	□□□□□ -1.76
SNF11	YDR073W	AIF1	P52923	378 aa		4.06	□□□□□ -1.76
SNF11	YDR073W	RAV2	Q03956	351 aa		4.06	□□□□□ -1.76
SNF11	YDR073W	SCW10	Q04951	389 aa		4.06	□□□□□ -1.76
SNF11	YDR073W	UBI4	P0CG63	381 aa	Known RBP	4.05	□□□□□ -1.76
SNF11	YDR073W	RPL2A	P0CX45	254 aa	Known RBP	4.05	□□□□□ -1.76
SNF11	YDR073W	RPL2B	P0CX46	254 aa	Known RBP	4.05	□□□□□ -1.76
SNF11	YDR073W	OPY1	P38271	328 aa		4.05	□□□□□ -1.76
SNF11	YDR073W	IPI1	P38803	334 aa	Predicted RBP	4.05	□□□□□ -1.76
SNF11	YDR073W	XPT1	P47165	209 aa		4.05	□□□□□ -1.76
SNF11	YDR073W	LSM3	P57743	89 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms