RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C YFR032C-BQ8TGU2 87 aa0.77□□□□□ -2.29
YDR008CYDR008C ATG40Q99325 256 aa0.77□□□□□ -2.29
YDR008CYDR008C YLR236CA0A023PZG4 107 aa0.76□□□□□ -2.29
YDR008CYDR008C SIR2P06700 562 aa0.76□□□□□ -2.29
YDR008CYDR008C MER1P16523 270 aa0.76□□□□□ -2.29
YDR008CYDR008C MAG1P22134 296 aaKnown RBP0.76□□□□□ -2.29
YDR008CYDR008C SPS18P32572 300 aa0.76□□□□□ -2.29
YDR008CYDR008C SEC17P32602 292 aa0.76□□□□□ -2.29
YDR008CYDR008C TCA17P32613 152 aa0.76□□□□□ -2.29
YDR008CYDR008C AIM2P39721 246 aa0.76□□□□□ -2.29
YDR008CYDR008C HMF1P40037 129 aaKnown RBP0.76□□□□□ -2.29
YDR008CYDR008C RIO2P40160 425 aaKnown RBP0.76□□□□□ -2.29
YDR008CYDR008C GCN20P43535 752 aaKnown RBP0.76□□□□□ -2.29
YDR008CYDR008C KNH1P50112 268 aa0.76□□□□□ -2.29
YDR008CYDR008C PGA2P53903 129 aa0.76□□□□□ -2.29
YDR008CYDR008C LSM7P53905 115 aaKnown RBP0.76□□□□□ -2.29
YDR008CYDR008C YDR249CQ03787 373 aa0.76□□□□□ -2.29
YDR008CYDR008C FUS2Q05670 677 aa0.76□□□□□ -2.29
YDR008CYDR008C YRA1Q12159 226 aaKnown RBP0.76□□□□□ -2.29
YDR008CYDR008C MSB2P32334 1306 aa0.75□□□□□ -2.29
YDR008CYDR008C IKI3Q06706 1349 aaKnown RBP0.75□□□□□ -2.29
YDR008CYDR008C YDR157WA0A023PZE8 133 aa0.75□□□□□ -2.29
YDR008CYDR008C CDC33P07260 213 aaKnown RBP0.75□□□□□ -2.29
YDR008CYDR008C RPB3P16370 318 aaKnown RBP0.75□□□□□ -2.29
YDR008CYDR008C SHE2P36068 246 aaKnown RBP RIP-Chip data0.75□□□□□ -2.29not detected
YDR008CYDR008C AIM25P47140 327 aa0.75□□□□□ -2.29
YDR008CYDR008C YGR050CP53231 118 aa0.75□□□□□ -2.29
YDR008CYDR008C MPA43P53583 542 aaPredicted RBP0.75□□□□□ -2.29
YDR008CYDR008C CUS2P53830 285 aaPredicted RBP0.75□□□□□ -2.29
YDR008CYDR008C POP3P53833 195 aaPredicted RBP0.75□□□□□ -2.29
YDR008CYDR008C UBC7Q02159 165 aa0.75□□□□□ -2.29
YDR008CYDR008C RCE1Q03530 315 aa0.75□□□□□ -2.29
YDR008CYDR008C YOL160WQ08321 113 aa0.75□□□□□ -2.29
YDR008CYDR008C YNL146C-AQ3E7Z1 64 aa0.75□□□□□ -2.29
YDR008CYDR008C YCR090CP25654 182 aaKnown RBP0.74□□□□□ -2.29
YDR008CYDR008C YCR087C-AP37263 153 aa0.74□□□□□ -2.29
YDR008CYDR008C OPY1P38271 328 aa0.74□□□□□ -2.29
YDR008CYDR008C SIP3P38717 1229 aa0.74□□□□□ -2.29
YDR008CYDR008C IKI1P38874 309 aa0.74□□□□□ -2.29
YDR008CYDR008C YER076CP40049 302 aa0.74□□□□□ -2.29
YDR008CYDR008C CWC23P52868 283 aaPredicted RBP0.74□□□□□ -2.29
YDR008CYDR008C COG5P53951 403 aa0.74□□□□□ -2.29
YDR008CYDR008C HNT1Q04344 158 aaKnown RBP0.74□□□□□ -2.29
YDR008CYDR008C YMR226CQ05016 267 aaKnown RBP0.74□□□□□ -2.29
YDR008CYDR008C YPR174CQ06616 221 aaPredicted RBP0.74□□□□□ -2.29
YDR008CYDR008C GIS3Q12418 502 aa0.74□□□□□ -2.29
YDR008CYDR008C HTB1P02293 131 aaKnown RBP0.73□□□□□ -2.29
YDR008CYDR008C HTB2P02294 131 aa0.73□□□□□ -2.29
YDR008CYDR008C VAR1P02381 398 aa0.73□□□□□ -2.29
YDR008CYDR008C SEC4P07560 215 aaKnown RBP0.73□□□□□ -2.29
YDR008CYDR008C SEC11P15367 167 aa0.73□□□□□ -2.29
YDR008CYDR008C CBF1P17106 351 aa0.73□□□□□ -2.29
YDR008CYDR008C NTG1P31378 399 aa0.73□□□□□ -2.29
YDR008CYDR008C GET1P53192 235 aa0.73□□□□□ -2.29
YDR008CYDR008C PET191Q02772 108 aa0.73□□□□□ -2.29
YDR008CYDR008C ARG80P07249 177 aa0.72□□□□□ -2.29
YDR008CYDR008C RPL27AP0C2H6 136 aaKnown RBP0.72□□□□□ -2.29
YDR008CYDR008C ATP15P21306 62 aa0.72□□□□□ -2.29
YDR008CYDR008C EDC3P39998 551 aaKnown RBP0.72□□□□□ -2.29
YDR008CYDR008C YPL073CP40323 161 aa0.72□□□□□ -2.29
YDR008CYDR008C ARO8P53090 500 aaKnown RBP0.72□□□□□ -2.29
YDR008CYDR008C YMR295CQ03559 197 aa0.72□□□□□ -2.29
YDR008CYDR008C RNH1Q04740 348 aa0.72□□□□□ -2.29
YDR008CYDR008C GGA1Q06336 557 aa0.72□□□□□ -2.29
YDR008CYDR008C FAS1P07149 2051 aaKnown RBP0.71□□□□□ -2.3
YDR008CYDR008C POR1P04840 283 aaKnown RBP0.71□□□□□ -2.3
YDR008CYDR008C CDC36P06100 191 aaPredicted RBP0.71□□□□□ -2.3
YDR008CYDR008C RPB4P20433 221 aaPredicted RBP0.71□□□□□ -2.3
YDR008CYDR008C KDX1P36005 433 aa0.71□□□□□ -2.3
YDR008CYDR008C PAN3P36102 679 aaPredicted RBP0.71□□□□□ -2.3
YDR008CYDR008C RFC4P40339 323 aaKnown RBP0.71□□□□□ -2.3
YDR008CYDR008C CGR1P53188 120 aa0.71□□□□□ -2.3
YDR008CYDR008C MRPS17Q03246 237 aaPredicted RBP0.71□□□□□ -2.3
YDR008CYDR008C YMR007WQ03675 126 aa0.71□□□□□ -2.3
YDR008CYDR008C DGA1Q08650 418 aa0.71□□□□□ -2.3
YDR008CYDR008C ODC2Q99297 307 aa0.71□□□□□ -2.3
YDR008CYDR008C MATALPHA2P0CY08 210 aa0.7□□□□□ -2.3
YDR008CYDR008C HMLALPHA2P0CY09 210 aa0.7□□□□□ -2.3
YDR008CYDR008C YPK2P18961 677 aa0.7□□□□□ -2.3
YDR008CYDR008C RFA3P26755 122 aaKnown RBP0.7□□□□□ -2.3
YDR008CYDR008C SOK1P40317 901 aa0.7□□□□□ -2.3
YDR008CYDR008C YLR036CQ07986 203 aa0.7□□□□□ -2.3
YDR008CYDR008C MBF1O14467 151 aaKnown RBP0.69□□□□□ -2.3
YDR008CYDR008C SPO13P23624 291 aa0.69□□□□□ -2.3
YDR008CYDR008C TAF14P35189 244 aa0.69□□□□□ -2.3
YDR008CYDR008C YEA4P40004 342 aa0.69□□□□□ -2.3
YDR008CYDR008C YER134CP40081 178 aa0.69□□□□□ -2.3
YDR008CYDR008C FLX1P40464 311 aa0.69□□□□□ -2.3
YDR008CYDR008C HYR1P40581 163 aaKnown RBP0.69□□□□□ -2.3
YDR008CYDR008C RPL37AP49166 88 aaKnown RBP0.69□□□□□ -2.3
YDR008CYDR008C MMS2P53152 137 aa0.69□□□□□ -2.3
YDR008CYDR008C YMR099CQ03161 297 aaKnown RBP0.69□□□□□ -2.3
YDR008CYDR008C MDM35O60200 86 aa0.68□□□□□ -2.3
YDR008CYDR008C OCH1P31755 480 aa0.68□□□□□ -2.3
YDR008CYDR008C YKT6P36015 200 aaKnown RBP0.68□□□□□ -2.3
YDR008CYDR008C VMA22P38784 181 aa0.68□□□□□ -2.3
YDR008CYDR008C YER034WP40022 185 aaKnown RBP0.68□□□□□ -2.3
YDR008CYDR008C SER2P42941 309 aa0.68□□□□□ -2.3
YDR008CYDR008C YAE1P47118 141 aaPredicted RBP0.68□□□□□ -2.3
YDR008CYDR008C MPC3P53311 146 aa0.68□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms