RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W CPA1P07258 411 aaKnown RBP1.46□□□□□ -2.18
SHS1YDL225W MATALPHA2P0CY08 210 aa1.46□□□□□ -2.18
SHS1YDL225W HMLALPHA2P0CY09 210 aa1.46□□□□□ -2.18
SHS1YDL225W YKR045CP36138 183 aa1.46□□□□□ -2.18
SHS1YDL225W RFC4P40339 323 aaKnown RBP1.46□□□□□ -2.18
SHS1YDL225W YNG1Q08465 219 aa1.46□□□□□ -2.18
SHS1YDL225W PDR18P53756 1333 aa1.46□□□□□ -2.18
SHS1YDL225W ATP15P21306 62 aa1.45□□□□□ -2.18
SHS1YDL225W AIM25P47140 327 aa1.45□□□□□ -2.18
SHS1YDL225W SAY1P53324 424 aa1.45□□□□□ -2.18
SHS1YDL225W YLR162WQ06235 118 aa1.45□□□□□ -2.18
SHS1YDL225W ADF1Q2V2Q1 113 aa1.45□□□□□ -2.18
SHS1YDL225W YCL012CQ8J0M4 134 aa1.45□□□□□ -2.18
SHS1YDL225W YIL177CP40434 1758 aa1.45□□□□□ -2.18
SHS1YDL225W YJL225CP40889 1758 aa1.45□□□□□ -2.18
SHS1YDL225W MAG1P22134 296 aaKnown RBP1.45□□□□□ -2.18
SHS1YDL225W YGL010WP25338 174 aa1.45□□□□□ -2.18
SHS1YDL225W YBR285WP38354 144 aa1.45□□□□□ -2.18
SHS1YDL225W HMF1P40037 129 aaKnown RBP1.45□□□□□ -2.18
SHS1YDL225W CGR1P53188 120 aa1.45□□□□□ -2.18
SHS1YDL225W MRPS17Q03246 237 aaPredicted RBP1.45□□□□□ -2.18
SHS1YDL225W GRX3Q03835 250 aa1.45□□□□□ -2.18
SHS1YDL225W MET5P47169 1442 aa1.44□□□□□ -2.18
SHS1YDL225W YBR209WP38311 105 aa1.44□□□□□ -2.18
SHS1YDL225W GLE2P40066 365 aa1.44□□□□□ -2.18
SHS1YDL225W UBR2Q07963 1872 aa1.43□□□□□ -2.18
SHS1YDL225W CKS1P20486 150 aaKnown RBP1.43□□□□□ -2.18
SHS1YDL225W TMA19P35691 167 aaKnown RBP1.43□□□□□ -2.18
SHS1YDL225W YBR220CP38318 560 aa1.43□□□□□ -2.18
SHS1YDL225W GGA1Q06336 557 aa1.43□□□□□ -2.18
SHS1YDL225W ANT1Q06497 328 aa1.43□□□□□ -2.18
SHS1YDL225W ABP140Q08641 628 aaKnown RBP1.43□□□□□ -2.18
SHS1YDL225W GET4Q12125 312 aa1.43□□□□□ -2.18
SHS1YDL225W IKI3Q06706 1349 aaKnown RBP1.43□□□□□ -2.18
SHS1YDL225W JIP3O13555 125 aa1.42□□□□□ -2.18
SHS1YDL225W RPL2AP0CX45 254 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W RPL2BP0CX46 254 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W TFC1P32367 649 aa1.42□□□□□ -2.18
SHS1YDL225W SHE2P36068 246 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
SHS1YDL225W ERG10P41338 398 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W GET1P53192 235 aa1.42□□□□□ -2.18
SHS1YDL225W NOP19P53317 196 aaPredicted RBP1.42□□□□□ -2.18
SHS1YDL225W POP3P53833 195 aaPredicted RBP1.42□□□□□ -2.18
SHS1YDL225W ATG40Q99325 256 aa1.42□□□□□ -2.18
SHS1YDL225W FAS1P07149 2051 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W YLR236CA0A023PZG4 107 aa1.42□□□□□ -2.18
SHS1YDL225W SIR2P06700 562 aa1.42□□□□□ -2.18
SHS1YDL225W RPL13BP40212 199 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W KNH1P50112 268 aa1.42□□□□□ -2.18
SHS1YDL225W MMS2P53152 137 aa1.42□□□□□ -2.18
SHS1YDL225W HNT1Q04344 158 aaKnown RBP1.42□□□□□ -2.18
SHS1YDL225W RPL13AQ12690 199 aaPredicted RBP1.42□□□□□ -2.18
SHS1YDL225W RPL27AP0C2H6 136 aaKnown RBP1.41□□□□□ -2.18
SHS1YDL225W CNB1P25296 175 aa1.41□□□□□ -2.18
SHS1YDL225W UPS2P35200 230 aa1.41□□□□□ -2.18
SHS1YDL225W ERJ5P43613 295 aaPredicted RBP1.41□□□□□ -2.18
SHS1YDL225W QCR7P00128 127 aa1.4□□□□□ -2.19
SHS1YDL225W MRS1P07266 363 aa1.4□□□□□ -2.19
SHS1YDL225W QCR8P08525 94 aa1.4□□□□□ -2.19
SHS1YDL225W FPR1P20081 114 aaKnown RBP1.4□□□□□ -2.19
SHS1YDL225W ASF2P32448 525 aaPredicted RBP1.4□□□□□ -2.19
SHS1YDL225W KDX1P36005 433 aa1.4□□□□□ -2.19
SHS1YDL225W NUP49Q02199 472 aa1.4□□□□□ -2.19
SHS1YDL225W GPA2P10823 449 aa1.39□□□□□ -2.19
SHS1YDL225W RAD28Q12021 506 aa1.39□□□□□ -2.19
SHS1YDL225W ACC1Q00955 2233 aaKnown RBP1.39□□□□□ -2.19
SHS1YDL225W MBF1O14467 151 aaKnown RBP1.39□□□□□ -2.19
SHS1YDL225W FUS2Q05670 677 aa1.39□□□□□ -2.19
SHS1YDL225W ODC2Q99297 307 aa1.39□□□□□ -2.19
SHS1YDL225W RAD9P14737 1309 aa1.38□□□□□ -2.19
SHS1YDL225W POR1P04840 283 aaKnown RBP1.38□□□□□ -2.19
SHS1YDL225W SEC11P15367 167 aa1.38□□□□□ -2.19
SHS1YDL225W YCR090CP25654 182 aaKnown RBP1.38□□□□□ -2.19
SHS1YDL225W OCH1P31755 480 aa1.38□□□□□ -2.19
SHS1YDL225W OPY1P38271 328 aa1.38□□□□□ -2.19
SHS1YDL225W VMA22P38784 181 aa1.38□□□□□ -2.19
SHS1YDL225W MPC3P53311 146 aa1.38□□□□□ -2.19
SHS1YDL225W CUE4Q04201 117 aaPredicted RBP1.38□□□□□ -2.19
SHS1YDL225W TVP23P38962 199 aa1.37□□□□□ -2.19
SHS1YDL225W ARP3P47117 449 aaKnown RBP1.37□□□□□ -2.19
SHS1YDL225W MZM1Q03429 123 aaPredicted RBP1.37□□□□□ -2.19
SHS1YDL225W YDL180WQ12301 547 aa1.37□□□□□ -2.19
SHS1YDL225W YPK2P18961 677 aa1.36□□□□□ -2.19
SHS1YDL225W SPO13P23624 291 aa1.36□□□□□ -2.19
SHS1YDL225W PAN3P36102 679 aaPredicted RBP1.36□□□□□ -2.19
SHS1YDL225W AIM2P39721 246 aa1.36□□□□□ -2.19
SHS1YDL225W YEA4P40004 342 aa1.36□□□□□ -2.19
SHS1YDL225W DGA1Q08650 418 aa1.36□□□□□ -2.19
SHS1YDL225W RIO1Q12196 484 aaKnown RBP1.36□□□□□ -2.19
SHS1YDL225W IGO2Q9P305 131 aa1.36□□□□□ -2.19
SHS1YDL225W SER2P42941 309 aa1.35□□□□□ -2.19
SHS1YDL225W ARO80Q04052 950 aa1.35□□□□□ -2.19
SHS1YDL225W APA2P22108 325 aa1.35□□□□□ -2.19
SHS1YDL225W YER034WP40022 185 aaKnown RBP1.35□□□□□ -2.19
SHS1YDL225W SKI6P46948 246 aaPredicted RBP1.35□□□□□ -2.19
SHS1YDL225W YNL184CP53876 108 aa1.35□□□□□ -2.19
SHS1YDL225W YMR099CQ03161 297 aaKnown RBP1.35□□□□□ -2.19
SHS1YDL225W YOL014WQ08110 124 aa1.35□□□□□ -2.19
SHS1YDL225W TVP38P36164 337 aa1.34□□□□□ -2.19
SHS1YDL225W PDS1P40316 373 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 258.1 ms