RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W RMD9P53140 646 aaKnown RBP1.95□□□□□ -2.1
MCD1YDL003W YGR066CP53242 292 aa1.95□□□□□ -2.1
MCD1YDL003W DAD3P69850 94 aa1.95□□□□□ -2.1
MCD1YDL003W ATG21Q02887 496 aa1.95□□□□□ -2.1
MCD1YDL003W MTQ2Q03920 221 aaPredicted RBP1.95□□□□□ -2.1
MCD1YDL003W CAB5Q03941 241 aa1.95□□□□□ -2.1
MCD1YDL003W TRI1Q05024 226 aa1.95□□□□□ -2.1
MCD1YDL003W KEI1Q06346 221 aa1.95□□□□□ -2.1
MCD1YDL003W CTR3Q06686 241 aa1.95□□□□□ -2.1
MCD1YDL003W POS5Q06892 414 aa1.95□□□□□ -2.1
MCD1YDL003W PRP11Q07350 266 aaPredicted RBP1.95□□□□□ -2.1
MCD1YDL003W YLR036CQ07986 203 aa1.95□□□□□ -2.1
MCD1YDL003W IES4Q08561 116 aa1.95□□□□□ -2.1
MCD1YDL003W YOR378WQ08902 515 aa1.95□□□□□ -2.1
MCD1YDL003W FRE8Q12209 686 aa1.95□□□□□ -2.1
MCD1YDL003W YDR262WQ12331 272 aa1.95□□□□□ -2.1
MCD1YDL003W YLR118CQ12354 227 aa1.95□□□□□ -2.1
MCD1YDL003W COX19Q3E731 98 aa1.95□□□□□ -2.1
MCD1YDL003W YIR021W-AQ3E739 70 aa1.95□□□□□ -2.1
MCD1YDL003W YKL018C-AQ3E7A7 99 aa1.95□□□□□ -2.1
MCD1YDL003W YCL012CQ8J0M4 134 aa1.95□□□□□ -2.1
MCD1YDL003W RIM15P43565 1770 aa1.95□□□□□ -2.1
MCD1YDL003W MYO1P08964 1928 aa1.95□□□□□ -2.1
MCD1YDL003W CDC36P06100 191 aaPredicted RBP1.94□□□□□ -2.1
MCD1YDL003W YPR170W-BP0C5R9 85 aa1.94□□□□□ -2.1
MCD1YDL003W TIR1P10863 254 aa1.94□□□□□ -2.1
MCD1YDL003W URA5P13298 226 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W YCR023CP25351 611 aa1.94□□□□□ -2.1
MCD1YDL003W CWP1P28319 239 aa1.94□□□□□ -2.1
MCD1YDL003W MDH3P32419 343 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
MCD1YDL003W HXT4P32467 576 aa1.94□□□□□ -2.1
MCD1YDL003W UTR5P32630 166 aa1.94□□□□□ -2.1
MCD1YDL003W TAE1P38340 232 aa1.94□□□□□ -2.1
MCD1YDL003W VBA2P38358 474 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W DOG2P38773 246 aa1.94□□□□□ -2.1
MCD1YDL003W YHR127WP38833 243 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W YHR177WP38867 453 aa1.94□□□□□ -2.1
MCD1YDL003W YEA6P39953 335 aa1.94□□□□□ -2.1
MCD1YDL003W PHS1P40857 217 aa1.94□□□□□ -2.1
MCD1YDL003W AZF1P41696 914 aa1.94□□□□□ -2.1
MCD1YDL003W SMK1P41808 388 aa1.94□□□□□ -2.1
MCD1YDL003W SMD3P43321 101 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W PET130P47065 347 aa1.94□□□□□ -2.1
MCD1YDL003W MSY1P48527 492 aa1.94□□□□□ -2.1
MCD1YDL003W YGR079WP53249 370 aa1.94□□□□□ -2.1
MCD1YDL003W YNL184CP53876 108 aa1.94□□□□□ -2.1
MCD1YDL003W YPL077CQ02831 240 aa1.94□□□□□ -2.1
MCD1YDL003W ECM18Q04623 453 aa1.94□□□□□ -2.1
MCD1YDL003W YMR252CQ04814 134 aa1.94□□□□□ -2.1
MCD1YDL003W BNA5Q05979 453 aa1.94□□□□□ -2.1
MCD1YDL003W SEI1Q06058 285 aa1.94□□□□□ -2.1
MCD1YDL003W BSC6Q08280 497 aa1.94□□□□□ -2.1
MCD1YDL003W DCI1Q08558 271 aa1.94□□□□□ -2.1
MCD1YDL003W YOR015WQ12169 119 aa1.94□□□□□ -2.1
MCD1YDL003W PRR2Q12310 699 aa1.94□□□□□ -2.1
MCD1YDL003W GEP5Q12393 293 aa1.94□□□□□ -2.1
MCD1YDL003W YLR363W-AQ3E747 85 aa1.94□□□□□ -2.1
MCD1YDL003W ADH1P00330 348 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W HIP1P06775 603 aa1.94□□□□□ -2.1
MCD1YDL003W ADK1P07170 222 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W CPA1P07258 411 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W MSF1P08425 469 aa1.94□□□□□ -2.1
MCD1YDL003W RAD23P32628 398 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W UGX2P32772 223 aa1.94□□□□□ -2.1
MCD1YDL003W MRPL24P36525 258 aaPredicted RBP1.94□□□□□ -2.1
MCD1YDL003W THI2P38141 450 aa1.94□□□□□ -2.1
MCD1YDL003W ATX1P38636 73 aa1.94□□□□□ -2.1
MCD1YDL003W YPT35P38815 214 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W PFS1P38872 237 aa1.94□□□□□ -2.1
MCD1YDL003W YEA4P40004 342 aa1.94□□□□□ -2.1
MCD1YDL003W HEM14P40012 539 aa1.94□□□□□ -2.1
MCD1YDL003W HMF1P40037 129 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W YER085CP40058 173 aa1.94□□□□□ -2.1
MCD1YDL003W SHO1P40073 367 aa1.94□□□□□ -2.1
MCD1YDL003W YER188WP40103 239 aa1.94□□□□□ -2.1
MCD1YDL003W PRE5P40302 234 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W DLS1P40366 167 aa1.94□□□□□ -2.1
MCD1YDL003W MOB1P40484 314 aa1.94□□□□□ -2.1
MCD1YDL003W MSL1P40567 111 aaPredicted RBP1.94□□□□□ -2.1
MCD1YDL003W PAM16P42949 149 aa1.94□□□□□ -2.1
MCD1YDL003W ATG27P46989 271 aa1.94□□□□□ -2.1
MCD1YDL003W BNS1P50084 137 aa1.94□□□□□ -2.1
MCD1YDL003W UBP8P50102 471 aa1.94□□□□□ -2.1
MCD1YDL003W ERG26P53199 349 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W PGA1P53896 198 aa1.94□□□□□ -2.1
MCD1YDL003W CCE1Q03702 353 aa1.94□□□□□ -2.1
MCD1YDL003W ELP6Q04868 273 aa1.94□□□□□ -2.1
MCD1YDL003W TAZ1Q06510 381 aa1.94□□□□□ -2.1
MCD1YDL003W COQ10Q08058 207 aa1.94□□□□□ -2.1
MCD1YDL003W YOR385WQ08909 290 aa1.94□□□□□ -2.1
MCD1YDL003W TPT1Q12272 230 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W YLR361C-AQ3E795 98 aa1.94□□□□□ -2.1
MCD1YDL003W YCR075W-AQ3E830 75 aa1.94□□□□□ -2.1
MCD1YDL003W DET1Q99288 334 aaKnown RBP1.94□□□□□ -2.1
MCD1YDL003W COX9P07255 59 aa1.93□□□□□ -2.1
MCD1YDL003W RPL27AP0C2H6 136 aaKnown RBP1.93□□□□□ -2.1
MCD1YDL003W RPL27BP0C2H7 136 aaKnown RBP1.93□□□□□ -2.1
MCD1YDL003W FCY2P17064 533 aa1.93□□□□□ -2.1
MCD1YDL003W GPI12P23797 304 aa1.93□□□□□ -2.1
MCD1YDL003W MEK1P24719 497 aaPredicted RBP1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 117.7 ms