RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W NCB2Q92317 146 aa1.14□□□□□ -2.23
SNF5YBR289W VMR1P38735 1592 aa1.13□□□□□ -2.23
SNF5YBR289W ADH3P07246 375 aaKnown RBP1.13□□□□□ -2.23
SNF5YBR289W YBR121C-AP0C5L4 52 aa1.13□□□□□ -2.23
SNF5YBR289W YBR063CP38083 404 aa1.13□□□□□ -2.23
SNF5YBR289W YAP3P38749 330 aa1.13□□□□□ -2.23
SNF5YBR289W ADO1P47143 340 aaKnown RBP1.13□□□□□ -2.23
SNF5YBR289W YDR249CQ03787 373 aa1.13□□□□□ -2.23
SNF5YBR289W YRF1-2P40105 1681 aa1.13□□□□□ -2.23
SNF5YBR289W FMP23P38231 175 aa1.13□□□□□ -2.23
SNF5YBR289W ERG10P41338 398 aaKnown RBP1.13□□□□□ -2.23
SNF5YBR289W NUP57P48837 541 aa1.13□□□□□ -2.23
SNF5YBR289W DOC1P53068 250 aa1.13□□□□□ -2.23
SNF5YBR289W YNR077CP53758 84 aa1.13□□□□□ -2.23
SNF5YBR289W YML096WQ04489 525 aa1.13□□□□□ -2.23
SNF5YBR289W YPL162CQ12042 273 aa1.13□□□□□ -2.23
SNF5YBR289W HTL1Q9URQ5 78 aa1.13□□□□□ -2.23
SNF5YBR289W CDC7P06243 507 aa1.12□□□□□ -2.23
SNF5YBR289W IDH1P28834 360 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
SNF5YBR289W ECM4P36156 370 aa1.12□□□□□ -2.23
SNF5YBR289W YRB1P41920 201 aaKnown RBP1.12□□□□□ -2.23
SNF5YBR289W IRC18P47056 224 aa1.12□□□□□ -2.23
SNF5YBR289W RMR1P53060 241 aa1.12□□□□□ -2.23
SNF5YBR289W NOP19P53317 196 aaPredicted RBP1.12□□□□□ -2.23
SNF5YBR289W PDR17P53844 350 aa1.12□□□□□ -2.23
SNF5YBR289W YMR226CQ05016 267 aaKnown RBP1.12□□□□□ -2.23
SNF5YBR289W HTB1P02293 131 aaKnown RBP1.12□□□□□ -2.23
SNF5YBR289W HTB2P02294 131 aa1.12□□□□□ -2.23
SNF5YBR289W VMA22P38784 181 aa1.12□□□□□ -2.23
SNF5YBR289W IKI1P38874 309 aa1.12□□□□□ -2.23
SNF5YBR289W COX15P40086 486 aa1.12□□□□□ -2.23
SNF5YBR289W YMR144WP40214 342 aaKnown RBP1.12□□□□□ -2.23
SNF5YBR289W GRE1Q08969 168 aa1.12□□□□□ -2.23
SNF5YBR289W USB1Q12208 290 aaKnown RBP1.12□□□□□ -2.23
SNF5YBR289W TSC11P40061 1430 aa1.12□□□□□ -2.23
SNF5YBR289W RPL27AP0C2H6 136 aaKnown RBP1.11□□□□□ -2.23
SNF5YBR289W RPL27BP0C2H7 136 aaKnown RBP1.11□□□□□ -2.23
SNF5YBR289W YLR156WP0CE96 114 aa1.11□□□□□ -2.23
SNF5YBR289W YLR159WP0CE97 114 aa1.11□□□□□ -2.23
SNF5YBR289W YLR161WP0CE98 114 aa1.11□□□□□ -2.23
SNF5YBR289W ATP15P21306 62 aa1.11□□□□□ -2.23
SNF5YBR289W YCR087C-AP37263 153 aa1.11□□□□□ -2.23
SNF5YBR289W CUE1P38428 203 aa1.11□□□□□ -2.23
SNF5YBR289W GLE2P40066 365 aa1.11□□□□□ -2.23
SNF5YBR289W HOP2P53187 214 aa1.11□□□□□ -2.23
SNF5YBR289W NEJ1Q06148 342 aa1.11□□□□□ -2.23
SNF5YBR289W ABP140Q08641 628 aaKnown RBP1.11□□□□□ -2.23
SNF5YBR289W YHR214C-EQ8TGK0 99 aa1.11□□□□□ -2.23
SNF5YBR289W YFR032C-BQ8TGU2 87 aa1.11□□□□□ -2.23
SNF5YBR289W TY2B-BQ12491 1770 aa1.11□□□□□ -2.23
SNF5YBR289W MLP2P40457 1679 aa1.11□□□□□ -2.23
SNF5YBR289W VTH1P40438 1549 aa1.11□□□□□ -2.23
SNF5YBR289W VTH2P40890 1549 aa1.11□□□□□ -2.23
SNF5YBR289W USO1P25386 1790 aa1.11□□□□□ -2.23
SNF5YBR289W QCR7P00128 127 aa1.11□□□□□ -2.23
SNF5YBR289W YKR045CP36138 183 aa1.11□□□□□ -2.23
SNF5YBR289W ILM1P47155 203 aa1.11□□□□□ -2.23
SNF5YBR289W ABF2Q02486 183 aa1.11□□□□□ -2.23
SNF5YBR289W YDR248CQ03786 193 aa1.11□□□□□ -2.23
SNF5YBR289W ARO80Q04052 950 aa1.11□□□□□ -2.23
SNF5YBR289W YPL257WQ08974 193 aa1.11□□□□□ -2.23
SNF5YBR289W IKI3Q06706 1349 aaKnown RBP1.11□□□□□ -2.23
SNF5YBR289W RPL28P02406 149 aaKnown RBP1.1□□□□□ -2.23
SNF5YBR289W BMT5P40493 336 aa1.1□□□□□ -2.23
SNF5YBR289W ICE2P40499 491 aa1.1□□□□□ -2.23
SNF5YBR289W FAR7P43592 221 aa1.1□□□□□ -2.23
SNF5YBR289W PRM15Q03262 622 aa1.1□□□□□ -2.23
SNF5YBR289W JLP1Q12358 412 aa1.1□□□□□ -2.23
SNF5YBR289W MHT1Q12525 324 aa1.1□□□□□ -2.23
SNF5YBR289W YBT1P32386 1661 aa1.1□□□□□ -2.23
SNF5YBR289W TY1B-JR2P47100 1755 aaKnown RBP1.1□□□□□ -2.23
SNF5YBR289W TY1B-ER2Q03619 1755 aa1.1□□□□□ -2.23
SNF5YBR289W TY1B-MR1Q04214 1755 aa1.1□□□□□ -2.23
SNF5YBR289W TY1B-MR2Q04670 1755 aaKnown RBP1.1□□□□□ -2.23
SNF5YBR289W TY1B-LR1Q12088 1755 aaKnown RBP1.1□□□□□ -2.23
SNF5YBR289W TY1B-NL1Q12112 1755 aa1.1□□□□□ -2.23
SNF5YBR289W TY1B-GR1Q12141 1755 aa1.1□□□□□ -2.23
SNF5YBR289W TY1B-BLQ12490 1755 aa1.1□□□□□ -2.23
SNF5YBR289W RSF2P46974 1380 aa1.1□□□□□ -2.23
SNF5YBR289W SRB8P25648 1427 aa1.1□□□□□ -2.23
SNF5YBR289W PDR11P40550 1411 aa1.1□□□□□ -2.23
SNF5YBR289W GEA1P47102 1408 aaPredicted RBP1.1□□□□□ -2.23
SNF5YBR289W PEX4P29340 183 aa1.1□□□□□ -2.23
SNF5YBR289W MRPL17P36528 281 aa1.1□□□□□ -2.23
SNF5YBR289W AYR1P40471 297 aa1.1□□□□□ -2.23
SNF5YBR289W FIS1P40515 155 aa1.1□□□□□ -2.23
SNF5YBR289W YFR054CP43622 192 aa1.1□□□□□ -2.23
SNF5YBR289W BXI1P48558 297 aa1.1□□□□□ -2.23
SNF5YBR289W GET1P53192 235 aa1.1□□□□□ -2.23
SNF5YBR289W MPC3P53311 146 aa1.1□□□□□ -2.23
SNF5YBR289W YML108WQ03759 105 aa1.1□□□□□ -2.23
SNF5YBR289W GIM5Q04493 163 aa1.1□□□□□ -2.23
SNF5YBR289W FUS2Q05670 677 aa1.1□□□□□ -2.23
SNF5YBR289W YOR283WQ12040 230 aaKnown RBP1.1□□□□□ -2.23
SNF5YBR289W YOR020W-AQ3E824 90 aa1.1□□□□□ -2.23
SNF5YBR289W PDR18P53756 1333 aa1.1□□□□□ -2.23
SNF5YBR289W KSS1P14681 368 aa1.09□□□□□ -2.23
SNF5YBR289W FCY2P17064 533 aa1.09□□□□□ -2.23
SNF5YBR289W PET9P18239 318 aaKnown RBP1.09□□□□□ -2.23
SNF5YBR289W ATP7P30902 174 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms