RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	RMD6	P39975	231 aa		1.4	□□□□□ -2.19
UBS1	YBR165W	YNL247W	P53852	767 aa	Known RBP	1.4	□□□□□ -2.19
UBS1	YBR165W	ACC1	Q00955	2233 aa	Known RBP	1.4	□□□□□ -2.19
UBS1	YBR165W	RPL27A	P0C2H6	136 aa	Known RBP	1.39	□□□□□ -2.19
UBS1	YBR165W	RTC3	P38804	111 aa	Predicted RBP	1.39	□□□□□ -2.19
UBS1	YBR165W	YFR032C-B	Q8TGU2	87 aa		1.39	□□□□□ -2.19
UBS1	YBR165W	RPL28	P02406	149 aa	Known RBP	1.38	□□□□□ -2.19
UBS1	YBR165W	PTM1	P32857	523 aa		1.38	□□□□□ -2.19
UBS1	YBR165W	YNG1	Q08465	219 aa		1.38	□□□□□ -2.19
UBS1	YBR165W	GCN3	P14741	305 aa		1.37	□□□□□ -2.19
UBS1	YBR165W	AST2	P39945	430 aa	Known RBP	1.37	□□□□□ -2.19
UBS1	YBR165W	MGA1	P53050	456 aa		1.37	□□□□□ -2.19
UBS1	YBR165W	COG5	P53951	403 aa		1.37	□□□□□ -2.19
UBS1	YBR165W	PET191	Q02772	108 aa		1.37	□□□□□ -2.19
UBS1	YBR165W	YKL183C-A	Q3E765	70 aa		1.37	□□□□□ -2.19
UBS1	YBR165W	YHR214C-E	Q8TGK0	99 aa		1.37	□□□□□ -2.19
UBS1	YBR165W	YBR121C-A	P0C5L4	52 aa		1.36	□□□□□ -2.19
UBS1	YBR165W	PPA2	P28239	310 aa		1.36	□□□□□ -2.19
UBS1	YBR165W	HUA1	P40325	198 aa		1.36	□□□□□ -2.19
UBS1	YBR165W	YRB1	P41920	201 aa	Known RBP	1.36	□□□□□ -2.19
UBS1	YBR165W	IRC18	P47056	224 aa		1.36	□□□□□ -2.19
UBS1	YBR165W	PDR17	P53844	350 aa		1.36	□□□□□ -2.19
UBS1	YBR165W	YOL160W	Q08321	113 aa		1.36	□□□□□ -2.19
UBS1	YBR165W	MGM101	P32787	269 aa	Known RBP	1.35	□□□□□ -2.19
UBS1	YBR165W	PRX1	P34227	261 aa	Known RBP	1.35	□□□□□ -2.19
UBS1	YBR165W	MDM35	O60200	86 aa		1.34	□□□□□ -2.19
UBS1	YBR165W	YHR212W-A	P0CX91	67 aa		1.34	□□□□□ -2.19
UBS1	YBR165W	MAG1	P22134	296 aa	Known RBP	1.34	□□□□□ -2.19
UBS1	YBR165W	RPL37B	P51402	88 aa	Known RBP	1.34	□□□□□ -2.19
UBS1	YBR165W	LSM7	P53905	115 aa	Known RBP	1.34	□□□□□ -2.19
UBS1	YBR165W	JLP1	Q12358	412 aa		1.34	□□□□□ -2.19
UBS1	YBR165W	SLH1	P53327	1967 aa	Known RBP	1.34	□□□□□ -2.2
UBS1	YBR165W	SPO13	P23624	291 aa		1.33	□□□□□ -2.2
UBS1	YBR165W	ERG28	P40030	148 aa		1.33	□□□□□ -2.2
UBS1	YBR165W	OTU1	P43558	301 aa		1.33	□□□□□ -2.2
UBS1	YBR165W	ADO1	P47143	340 aa	Known RBP	1.33	□□□□□ -2.2
UBS1	YBR165W	MPC3	P53311	146 aa		1.33	□□□□□ -2.2
UBS1	YBR165W	NCB2	Q92317	146 aa		1.33	□□□□□ -2.2
UBS1	YBR165W	ODC2	Q99297	307 aa		1.33	□□□□□ -2.2
UBS1	YBR165W	RTR1	P40084	226 aa	Predicted RBP	1.32	□□□□□ -2.2
UBS1	YBR165W	HYR1	P40581	163 aa	Known RBP	1.32	□□□□□ -2.2
UBS1	YBR165W	YFH7	P43591	353 aa		1.32	□□□□□ -2.2
UBS1	YBR165W	YPL073C	P40323	161 aa		1.31	□□□□□ -2.2
UBS1	YBR165W	YMR252C	Q04814	134 aa		1.31	□□□□□ -2.2
UBS1	YBR165W	YPR174C	Q06616	221 aa	Predicted RBP	1.31	□□□□□ -2.2
UBS1	YBR165W	YIL177C	P40434	1758 aa		1.3	□□□□□ -2.2
UBS1	YBR165W	YJL225C	P40889	1758 aa		1.3	□□□□□ -2.2
UBS1	YBR165W	RPL25	P04456	142 aa	Known RBP	1.3	□□□□□ -2.2
UBS1	YBR165W	CKS1	P20486	150 aa	Known RBP	1.3	□□□□□ -2.2
UBS1	YBR165W	AIM36	Q03798	255 aa		1.3	□□□□□ -2.2
UBS1	YBR165W	DGA1	Q08650	418 aa		1.3	□□□□□ -2.2
UBS1	YBR165W	BMH2	P34730	273 aa	Known RBP	1.29	□□□□□ -2.2
UBS1	YBR165W	HNT1	Q04344	158 aa	Known RBP	1.29	□□□□□ -2.2
UBS1	YBR165W	YRA1	Q12159	226 aa	Known RBP	1.29	□□□□□ -2.2
UBS1	YBR165W	NHP6B	P11633	99 aa	Known RBP	1.28	□□□□□ -2.2
UBS1	YBR165W	YNL194C	P40169	301 aa		1.28	□□□□□ -2.2
UBS1	YBR165W	ERG10	P41338	398 aa	Known RBP	1.28	□□□□□ -2.2
UBS1	YBR165W	IKI3	Q06706	1349 aa	Known RBP	1.28	□□□□□ -2.2
UBS1	YBR165W	YDR157W	A0A023PZE8	133 aa		1.27	□□□□□ -2.21
UBS1	YBR165W	MER1	P16523	270 aa		1.27	□□□□□ -2.21
UBS1	YBR165W	HMF1	P40037	129 aa	Known RBP	1.27	□□□□□ -2.21
UBS1	YBR165W	POR1	P04840	283 aa	Known RBP	1.26	□□□□□ -2.21
UBS1	YBR165W	OCH1	P31755	480 aa		1.26	□□□□□ -2.21
UBS1	YBR165W	CBT1	P36038	271 aa	Predicted RBP	1.26	□□□□□ -2.21
UBS1	YBR165W	ECM4	P36156	370 aa		1.26	□□□□□ -2.21
UBS1	YBR165W	TRM5	P38793	499 aa		1.26	□□□□□ -2.21
UBS1	YBR165W	HPA3	P39979	161 aa		1.26	□□□□□ -2.21
UBS1	YBR165W	RAD17	P48581	401 aa		1.26	□□□□□ -2.21
UBS1	YBR165W	DAD4	P69851	72 aa		1.26	□□□□□ -2.21
UBS1	YBR165W	FAS1	P07149	2051 aa	Known RBP	1.25	□□□□□ -2.21
UBS1	YBR165W	TVP23	P38962	199 aa		1.25	□□□□□ -2.21
UBS1	YBR165W	GGA1	Q06336	557 aa		1.25	□□□□□ -2.21
UBS1	YBR165W	LCL2	Q08045	131 aa		1.25	□□□□□ -2.21
UBS1	YBR165W	STE18	P18852	110 aa		1.24	□□□□□ -2.21
UBS1	YBR165W	PRP18	P33411	251 aa	Predicted RBP	1.24	□□□□□ -2.21
UBS1	YBR165W	AIM25	P47140	327 aa		1.24	□□□□□ -2.21
UBS1	YBR165W	CWC23	P52868	283 aa	Predicted RBP	1.24	□□□□□ -2.21
UBS1	YBR165W	MDM32	Q12171	622 aa		1.24	□□□□□ -2.21
UBS1	YBR165W	PAN3	P36102	679 aa	Predicted RBP	1.23	□□□□□ -2.21
UBS1	YBR165W	YEL008W	P40001	126 aa		1.23	□□□□□ -2.21
UBS1	YBR165W	GET1	P53192	235 aa		1.23	□□□□□ -2.21
UBS1	YBR165W	CDC33	P07260	213 aa	Known RBP	1.22	□□□□□ -2.21
UBS1	YBR165W	COQ1	P18900	473 aa		1.22	□□□□□ -2.21
UBS1	YBR165W	YCR090C	P25654	182 aa	Known RBP	1.22	□□□□□ -2.21
UBS1	YBR165W	YCR087C-A	P37263	153 aa		1.22	□□□□□ -2.21
UBS1	YBR165W	YHL018W	P38744	120 aa	Predicted RBP	1.22	□□□□□ -2.21
UBS1	YBR165W	MSS2	P40990	351 aa		1.22	□□□□□ -2.21
UBS1	YBR165W	UBC12	P52491	188 aa		1.22	□□□□□ -2.21
UBS1	YBR165W	PHO85	P17157	305 aa		1.21	□□□□□ -2.22
UBS1	YBR165W	CNB1	P25296	175 aa		1.21	□□□□□ -2.22
UBS1	YBR165W	YEA4	P40004	342 aa		1.21	□□□□□ -2.22
UBS1	YBR165W	YCL042W	P25572	119 aa		1.2	□□□□□ -2.22
UBS1	YBR165W	SPS18	P32572	300 aa		1.2	□□□□□ -2.22
UBS1	YBR165W	RPB7	P34087	171 aa		1.2	□□□□□ -2.22
UBS1	YBR165W	DYN3	Q04949	312 aa		1.2	□□□□□ -2.22
UBS1	YBR165W	PRP11	Q07350	266 aa	Predicted RBP	1.2	□□□□□ -2.22
UBS1	YBR165W	TAF14	P35189	244 aa		1.19	□□□□□ -2.22
UBS1	YBR165W	IKI1	P38874	309 aa		1.19	□□□□□ -2.22
UBS1	YBR165W	GCN20	P43535	752 aa	Known RBP	1.19	□□□□□ -2.22
UBS1	YBR165W	RNH202	Q05635	350 aa		1.19	□□□□□ -2.22

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms