RNA–Protein interactions for RNA: YBR012W-A

YBR012W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBR012W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR012W-AYBR012W-A YFR054CP43622 192 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A OST2P46964 130 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A YJR149WP47177 404 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A TRM9P49957 279 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A DIE2P50076 525 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A NQM1P53228 333 aaPredicted RBP1.18□□□□□ -2.22
YBR012W-AYBR012W-A MPP6P53725 186 aaPredicted RBP1.18□□□□□ -2.22
YBR012W-AYBR012W-A YNL140CP53910 189 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A YDR366CP87287 132 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A NUP49Q02199 472 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A SDH7Q04401 133 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A NOC4Q06512 552 aaPredicted RBP1.18□□□□□ -2.22
YBR012W-AYBR012W-A HRD1Q08109 551 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A RRP40Q08285 240 aaKnown RBP1.18□□□□□ -2.22
YBR012W-AYBR012W-A YNG1Q08465 219 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A SYC1Q08553 188 aaPredicted RBP1.18□□□□□ -2.22
YBR012W-AYBR012W-A AKR2Q12013 749 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A GIS3Q12418 502 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A SLO1Q3E784 85 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A YLR099W-AQ3E798 87 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A CAT8P39113 1433 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A LYS2P07702 1392 aa1.18□□□□□ -2.22
YBR012W-AYBR012W-A MON2P48563 1636 aaPredicted RBP1.18□□□□□ -2.22
YBR012W-AYBR012W-A PDR5P33302 1511 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A COX2P00410 251 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A CDC36P06100 191 aaPredicted RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A RAD6P06104 172 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A MATALPHA1P0CY06 175 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A HMLALPHA1P0CY07 175 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A NHP6BP11633 99 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A HAP3P13434 144 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A PET9P18239 318 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A COQ1P18900 473 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A PHO13P19881 312 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A SEC59P20048 519 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A CCA1P21269 546 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A DAL82P21705 255 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A MAG1P22134 296 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A RPS1BP23248 255 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A PBN1P25580 416 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A MGT1P26188 188 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A EHD3P28817 500 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A MRP49P32388 137 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A MDH3P32419 343 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
YBR012W-AYBR012W-A SRB6P32570 121 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A PTM1P32857 523 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A SSS1P35179 80 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A YET1P35723 206 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A UTP30P36144 274 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A MSA2P36157 363 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A ECM31P38122 312 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A DER1P38307 211 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A YBR220CP38318 560 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A POP4P38336 279 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A URA8P38627 578 aaPredicted RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A RPF1P38805 295 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A CYC2P38909 366 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A AST2P39945 430 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A PGD1P40356 397 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A POG1P40473 351 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A ICE2P40499 491 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A TIR3P40552 269 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A NSE4P43124 402 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A RPA43P46669 326 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A GPI14P47088 403 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A XPT1P47165 209 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A AIF1P52923 378 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A JAC1P53193 184 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A YNL134CP53912 376 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A COG5P53951 403 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A ALG11P53954 548 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A YCL001W-AP87012 153 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A DIG2Q03373 323 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A YDR248CQ03786 193 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A YDR249CQ03787 373 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A GPI17Q04080 534 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A ADH6Q04894 360 aaKnown RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A PRP11Q07350 266 aaPredicted RBP1.17□□□□□ -2.22
YBR012W-AYBR012W-A LDB18Q07887 179 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A MEU1Q07938 337 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
YBR012W-AYBR012W-A SPC3Q12133 184 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A TPO4Q12256 659 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A YHR213W-AQ8TGT4 77 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A NUP159P40477 1460 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A IQG1Q12280 1495 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A HAP1P0CE41 1502 aa1.17□□□□□ -2.22
YBR012W-AYBR012W-A COX5BP00425 151 aa1.16□□□□□ -2.22
YBR012W-AYBR012W-A RAS2P01120 322 aaKnown RBP1.16□□□□□ -2.22
YBR012W-AYBR012W-A SPS2P08459 502 aa1.16□□□□□ -2.22
YBR012W-AYBR012W-A YBR121C-AP0C5L4 52 aa1.16□□□□□ -2.22
YBR012W-AYBR012W-A FUN14P18411 198 aa1.16□□□□□ -2.22
YBR012W-AYBR012W-A ANB1P19211 157 aa1.16□□□□□ -2.22
YBR012W-AYBR012W-A HYP2P23301 157 aaKnown RBP1.16□□□□□ -2.22
YBR012W-AYBR012W-A CNB1P25296 175 aa1.16□□□□□ -2.22
YBR012W-AYBR012W-A UBC8P28263 218 aa1.16□□□□□ -2.22
YBR012W-AYBR012W-A SUA7P29055 345 aaPredicted RBP1.16□□□□□ -2.22
YBR012W-AYBR012W-A TRR1P29509 319 aaKnown RBP1.16□□□□□ -2.22
YBR012W-AYBR012W-A HOM6P31116 359 aaKnown RBP1.16□□□□□ -2.22
YBR012W-AYBR012W-A ARO7P32178 256 aa1.16□□□□□ -2.22
YBR012W-AYBR012W-A GSP1P32835 219 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms