RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 SALL4Q9UJQ4 1053 aa16.56■□□□□ 0.24
VAC14-211ENST00000568886 AGO2Q9UKV8 859 aaKnown RBP16.56■□□□□ 0.24
VAC14-211ENST00000568886 GNA14O95837 355 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 STAG3L1P0CL83 205 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 RPL13P26373 211 aaKnown RBP16.55■□□□□ 0.24
VAC14-211ENST00000568886 PAFAH1B1P43034 410 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 MARSP56192 900 aaKnown RBP16.55■□□□□ 0.24
VAC14-211ENST00000568886 GLE1Q53GS7 698 aaKnown RBP16.55■□□□□ 0.24
VAC14-211ENST00000568886 EMBQ6PCB8 327 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 CDR2LQ86X02 465 aaPredicted RBP16.55■□□□□ 0.24
VAC14-211ENST00000568886 HDAC7Q8WUI4 952 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 RIN2Q8WYP3 895 aaPredicted RBP16.55■□□□□ 0.24
VAC14-211ENST00000568886 CBWD1Q9BRT8 395 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 IKZF4Q9H2S9 585 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 LUC7LQ9NQ29 371 aaKnown RBP16.55■□□□□ 0.24
VAC14-211ENST00000568886 STIM2Q9P246 746 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 TISP43B9A030 160 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 MAPK13O15264 365 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 INPPL1O15357 1258 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 HOXA2O43364 376 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 SERPING1P05155 500 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 ATF7P17544 494 aaPredicted RBP16.55■□□□□ 0.24
VAC14-211ENST00000568886 MATR3P43243 847 aaKnown RBP eCLIP16.55■□□□□ 0.248e-7■■□□□ 12.8
VAC14-211ENST00000568886 GFPT1Q06210 699 aaPredicted RBP16.55■□□□□ 0.24
VAC14-211ENST00000568886 KLHDC7AQ5VTJ3 777 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 FOXR1Q6PIV2 292 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 SND1Q7KZF4 910 aaKnown RBP eCLIP16.55■□□□□ 0.24
VAC14-211ENST00000568886 OTOP2Q7RTS6 562 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 FAM76AQ8TAV0 307 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 SLC9A7Q96T83 725 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 HSPBP1Q9NZL4 362 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 GIT1Q9Y2X7 761 aa16.55■□□□□ 0.24
VAC14-211ENST00000568886 EXTL3O43909 919 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 NOL4O94818 638 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 NR3C1P04150 777 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 CLTAP09496 248 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 TTC3P53804 2025 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 ZBTB33Q86T24 672 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 GPD1LQ8N335 351 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 XXYLT1Q8NBI6 393 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 CAVIN3Q969G5 261 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 TOP1MTQ969P6 601 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 TSPAN18Q96SJ8 248 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 SH3GL2Q99962 352 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 CPSF3Q9UKF6 684 aaKnown RBP16.54■□□□□ 0.24
VAC14-211ENST00000568886 GOLGA6CA6NDK9 693 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 ADRB2P07550 413 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 GOLGA6DP0CG33 693 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 NNTQ13423 1086 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 TDRD12Q587J7 1177 aaKnown RBP16.54■□□□□ 0.24
VAC14-211ENST00000568886 SFMBT2Q5VUG0 894 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 MKNK1Q9BUB5 465 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 UBE2OQ9C0C9 1292 aaKnown RBP16.54■□□□□ 0.24
VAC14-211ENST00000568886 GOLGA6AQ9NYA3 693 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 PCDHB7Q9Y5E2 793 aa16.54■□□□□ 0.24
VAC14-211ENST00000568886 GOLGA8KD6RF30 607 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 CLSTN1O94985 981 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 ITGA4P13612 1032 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 ENPEPQ07075 957 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 ALS2CLQ60I27 953 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.53■□□□□ 0.24
VAC14-211ENST00000568886 TRIM59Q8IWR1 403 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 ACAP3Q96P50 834 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 NXF3Q9H4D5 531 aaKnown RBP16.53■□□□□ 0.24
VAC14-211ENST00000568886 PLEKHA5Q9HAU0 1116 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 SLC4A7Q9Y6M7 1214 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 CLIC2O15247 247 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 NCK2O43639 380 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 NR2F2P24468 414 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 CXCR5P32302 372 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 MCCD1P59942 119 aaPredicted RBP16.53■□□□□ 0.24
VAC14-211ENST00000568886 CFAP221Q4G0U5 840 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 XKR4Q5GH76 650 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 C8orf74Q6P047 294 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 GBP6Q6ZN66 633 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 CD302Q8IX05 232 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 PRO3102Q9H379 93 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 TOPORSQ9NS56 1045 aaPredicted RBP16.53■□□□□ 0.24
VAC14-211ENST00000568886 PCDH10Q9P2E7 1040 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 LRFN2Q9ULH4 789 aa16.53■□□□□ 0.24
VAC14-211ENST00000568886 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.53■□□□□ 0.24
VAC14-211ENST00000568886 ZBBXA8MT70 800 aa16.52■□□□□ 0.24
VAC14-211ENST00000568886 CETN3O15182 167 aa16.52■□□□□ 0.24
VAC14-211ENST00000568886 SLC16A3O15427 465 aaKnown RBP16.52■□□□□ 0.24
VAC14-211ENST00000568886 OPA1O60313 960 aa16.52■□□□□ 0.24
VAC14-211ENST00000568886 EPB41P11171 864 aaKnown RBP16.52■□□□□ 0.24
VAC14-211ENST00000568886 YARSP54577 528 aaKnown RBP16.52■□□□□ 0.24
VAC14-211ENST00000568886 ADAM9Q13443 819 aa16.52■□□□□ 0.24
VAC14-211ENST00000568886 NAB2Q15742 525 aa16.52■□□□□ 0.24
VAC14-211ENST00000568886 CRELD2Q6UXH1 353 aaPredicted RBP16.52■□□□□ 0.24
VAC14-211ENST00000568886 AGMOQ6ZNB7 445 aa16.52■□□□□ 0.24
VAC14-211ENST00000568886 THNSL1Q8IYQ7 743 aa16.52■□□□□ 0.24
VAC14-211ENST00000568886 PSMB7Q99436 277 aa16.52■□□□□ 0.24
VAC14-211ENST00000568886 LSM14BQ9BX40 385 aaKnown RBP16.52■□□□□ 0.24
VAC14-211ENST00000568886 NLRC4Q9NPP4 1024 aa16.52■□□□□ 0.24
VAC14-211ENST00000568886 RBM12Q9NTZ6 932 aaKnown RBP16.52■□□□□ 0.24
VAC14-211ENST00000568886 SNTG2Q9NY99 539 aa16.52■□□□□ 0.24
VAC14-211ENST00000568886 COL4A6Q14031 1691 aa16.52■□□□□ 0.23
VAC14-211ENST00000568886 TRIM66O15016 1216 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms