RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 COL9A2Q14055 689 aaPredicted RBP10.4□□□□□ -0.74
C2CD3-220ENST00000544293 DCAF4L1Q3SXM0 396 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 CTXN3Q4LDR2 81 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 GAREM2Q75VX8 874 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.4□□□□□ -0.74
C2CD3-220ENST00000544293 KBTBD6Q86V97 674 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 ARID3BQ8IVW6 561 aaPredicted RBP10.4□□□□□ -0.74
C2CD3-220ENST00000544293 DAW1Q8N136 415 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 DDX12PQ92771 950 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 ZBTB45Q96K62 511 aaPredicted RBP10.4□□□□□ -0.74
C2CD3-220ENST00000544293 SUSD3Q96L08 255 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 ZNF512Q96ME7 567 aaPredicted RBP10.4□□□□□ -0.74
C2CD3-220ENST00000544293 NACC1Q96RE7 527 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 ACO2Q99798 780 aaKnown RBP10.4□□□□□ -0.74
C2CD3-220ENST00000544293 ADPGKQ9BRR6 497 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 TUFT1Q9NNX1 390 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 PDRG1Q9NUG6 133 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 ORC3Q9UBD5 711 aaPredicted RBP10.4□□□□□ -0.74
C2CD3-220ENST00000544293 COL4A2P08572 1712 aa10.4□□□□□ -0.74
C2CD3-220ENST00000544293 A0A1W2PRU2 124 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 GIPC1O14908 333 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 OAZ2O95190 189 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 EPN2O95208 641 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 TOP3BO95985 862 aaKnown RBP10.39□□□□□ -0.75
C2CD3-220ENST00000544293 RPA1P27694 616 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 KRT2P35908 639 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 TNK2Q07912 1038 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 PPP2R5DQ14738 602 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 PON2Q15165 354 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 SLC10A6Q3KNW5 377 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 DGKKQ5KSL6 1271 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 STPG1Q5TH74 334 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 TCEAL6Q6IPX3 200 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 CPLX2Q6PUV4 134 aaKnown RBP10.39□□□□□ -0.75
C2CD3-220ENST00000544293 DEPTORQ8TB45 409 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 TCEAL3Q969E4 200 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 TARS2Q9BW92 718 aaKnown RBP10.39□□□□□ -0.75
C2CD3-220ENST00000544293 C8orf33Q9H7E9 229 aaPredicted RBP10.39□□□□□ -0.75
C2CD3-220ENST00000544293 FBRSL1Q9HCM7 1045 aaKnown RBP10.39□□□□□ -0.75
C2CD3-220ENST00000544293 CNTN3Q9P232 1028 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 YIPF1Q9Y548 306 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 TIMM13Q9Y5L4 95 aaPredicted RBP10.39□□□□□ -0.75
C2CD3-220ENST00000544293 FRYQ5TBA9 3013 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 BAHCC1Q9P281 2608 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 ZFYVE26Q68DK2 2539 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 MIA3Q5JRA6 1907 aa10.39□□□□□ -0.75
C2CD3-220ENST00000544293 H7C4K7 107 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 M0QZQ0 153 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 RIOK3O14730 519 aaKnown RBP10.38□□□□□ -0.75
C2CD3-220ENST00000544293 NEMFO60524 1076 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 LARGE1O95461 756 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 RPL9P32969 192 aaKnown RBP10.38□□□□□ -0.75
C2CD3-220ENST00000544293 DUSP4Q13115 394 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 ZBTB6Q15916 424 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 SEZ6Q53EL9 994 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 IL31Q6EBC2 164 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 IQCEQ6IPM2 695 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 DNAJB7Q7Z6W7 309 aaPredicted RBP10.38□□□□□ -0.75
C2CD3-220ENST00000544293 RALGPS2Q86X27 583 aaPredicted RBP10.38□□□□□ -0.75
C2CD3-220ENST00000544293 TTC9BQ8N6N2 239 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 C4orf32Q8N8J7 132 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 NECAB1Q8N987 351 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 KDF1Q8NAX2 398 aaPredicted RBP10.38□□□□□ -0.75
C2CD3-220ENST00000544293 LEMD2Q8NC56 503 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 GAB3Q8WWW8 586 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 DDX1Q92499 740 aaKnown RBP10.38□□□□□ -0.75
C2CD3-220ENST00000544293 RNF25Q96BH1 459 aaPredicted RBP10.38□□□□□ -0.75
C2CD3-220ENST00000544293 MSANTD3Q96H12 275 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 LOXL4Q96JB6 756 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 TBC1D32Q96NH3 1257 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 GPR88Q9GZN0 384 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 HAPLN2Q9GZV7 340 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 IL21Q9HBE4 155 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 ASAH2Q9NR71 780 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 TUBGCP4Q9UGJ1 667 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 MAFFQ9ULX9 164 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 SLC27A5Q9Y2P5 690 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 CEP295Q9C0D2 2601 aa10.38□□□□□ -0.75
C2CD3-220ENST00000544293 K7ERI5 159 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 EPB41L2O43491 1005 aaKnown RBP10.37□□□□□ -0.75
C2CD3-220ENST00000544293 FOXD2O60548 495 aaPredicted RBP10.37□□□□□ -0.75
C2CD3-220ENST00000544293 PRAMEF12O95522 483 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 NPTX2P47972 431 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 AARSP49588 968 aaKnown RBP eCLIP10.37□□□□□ -0.75
C2CD3-220ENST00000544293 KPNA1P52294 538 aaPredicted RBP10.37□□□□□ -0.75
C2CD3-220ENST00000544293 EFNA5P52803 228 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 ST3GAL1Q11201 340 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 MAPK7Q13164 816 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 LRRC32Q14392 662 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 ME3Q16798 604 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 TMEM132AQ24JP5 1023 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 AASDHQ4L235 1098 aaPredicted RBP10.37□□□□□ -0.75
C2CD3-220ENST00000544293 NAIF1Q69YI7 327 aaPredicted RBP10.37□□□□□ -0.75
C2CD3-220ENST00000544293 CENPPQ6IPU0 288 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 FSTL4Q6MZW2 842 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 CEP68Q76N32 757 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 CENPQQ7L2Z9 268 aaPredicted RBP10.37□□□□□ -0.75
C2CD3-220ENST00000544293 DIS3L2Q8IYB7 885 aaKnown RBP10.37□□□□□ -0.75
C2CD3-220ENST00000544293 SYNPOQ8N3V7 929 aa10.37□□□□□ -0.75
C2CD3-220ENST00000544293 ATAD1Q8NBU5 361 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms