RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ADAM17P78536 824 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 FAM189BP81408 668 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 TNK2Q07912 1038 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 FBLN7Q53RD9 439 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 PRR30Q53SZ7 412 aaPredicted RBP3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 CLLU1OSQ5K130 101 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 SYCP2LQ5T4T6 812 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 DUSP27Q5VZP5 1158 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 ERICH6BQ5W0A0 696 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 FOXR1Q6PIV2 292 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 NSMFQ6X4W1 530 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 TMEM179Q6ZVK1 233 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 TRMT2AQ8IZ69 625 aaKnown RBP3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 LMBR1Q8WVP7 490 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 DNAJB3Q8WWF6 145 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 KIFC2Q96AC6 838 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 ZFYVE19Q96K21 471 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 ZSWIM3Q96MP5 696 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 DEPDC7Q96QD5 511 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 TUT1Q9H6E5 874 aaKnown RBP3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 RXFP1Q9HBX9 757 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 FBRSL1Q9HCM7 1045 aaKnown RBP3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 SPHK2Q9NRA0 654 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 AATFQ9NY61 560 aaKnown RBP eCLIP3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 MAP10Q9P2G4 905 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 MYH1P12882 1939 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 KNL1Q8NG31 2342 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 SACSQ9NZJ4 4579 aa3.71□□□□□ -1.82
SCARNA13-201ENST00000516672 IGSF9BQ9UPX0 1349 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 PLXND1Q9Y4D7 1925 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 SONP18583 2426 aaKnown RBP3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 A0A1B0GVT2 93 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 WDR27A2RRH5 827 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 TRDMT1O14717 391 aaKnown RBP3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 PPFIA4O75335 1185 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 C1RP00736 705 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 RHOP08100 348 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 HNRNPLP14866 589 aaKnown RBP eCLIP3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 DRD1P21728 446 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 EDNRBP24530 442 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 HTR1EP28566 365 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 DEKP35659 375 aaKnown RBP3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 PPP4CP60510 307 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 ICA1Q05084 483 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 SLFN5Q08AF3 891 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 FCHO2Q0JRZ9 810 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 INPP5JQ15735 1006 aaPredicted RBP3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 FBXO43Q4G163 708 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 MIIPQ5JXC2 388 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 WDR45BQ5MNZ6 344 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 LIN9Q5TKA1 542 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 CCDC30Q5VVM6 783 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 TAF2Q6P1X5 1199 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 TMEM92Q6UXU6 159 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 TAS1R1Q7RTX1 841 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 C14orf80Q86SX3 495 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 PGBD3Q8N328 593 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 ARL14Q8N4G2 192 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 HELQQ8TDG4 1101 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 RSPRY1Q96DX4 576 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 SNRKQ9NRH2 765 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 BMP2KQ9NSY1 1161 aaPredicted RBP3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 STK39Q9UEW8 545 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 SNX11Q9Y5W9 270 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 DYNC2H1Q8NCM8 4307 aaKnown RBP3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 NFASCO94856 1347 aa3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 PDS5AQ29RF7 1337 aaKnown RBP3.7□□□□□ -1.82
SCARNA13-201ENST00000516672 E2F8A0AVK6 867 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 PRPF3O43395 683 aaKnown RBP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 TSPAN3O60637 253 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 VAMP4O75379 141 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 TNFSF15O95150 251 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 CBX6O95503 412 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 BAG3O95817 575 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 SOD2P04179 222 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 THEGLP0DJG4 465 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 U2AF2P26368 475 aaKnown RBP eCLIP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 HOXA9P31269 272 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 QARSP47897 775 aaKnown RBP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 SLC11A1P49279 550 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 GABPAQ06546 454 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 LAMC2Q13753 1193 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 RASGRF1Q13972 1273 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 BAATQ14032 418 aaPredicted RBP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 CRY1Q16526 586 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 ZNF630Q2M218 657 aaPredicted RBP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 SLC35G1Q2M3R5 365 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 TWISTNBQ3B726 338 aaPredicted RBP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 TKFCQ3LXA3 575 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 TTC39AQ5SRH9 613 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 CDCP2Q5VXM1 449 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 MTHFD1LQ6UB35 978 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 SEPT14Q6ZU15 432 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 ASB18Q6ZVZ8 466 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 HAUS6Q7Z4H7 955 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 ZGRF1Q86YA3 2104 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 GATAD2AQ86YP4 633 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 KCTD17Q8N5Z5 321 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 ENAHQ8N8S7 591 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms