RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 PLS1Q14651 629 aa8.64□□□□□ -1.03
UBE2B-204ENST00000504431 ADCK5Q3MIX3 580 aa8.64□□□□□ -1.03
UBE2B-204ENST00000504431 OTOP1Q7RTM1 612 aa8.64□□□□□ -1.03
UBE2B-204ENST00000504431 RAB11FIP4Q86YS3 637 aa8.64□□□□□ -1.03
UBE2B-204ENST00000504431 MZB1Q8WU39 189 aa8.64□□□□□ -1.03
UBE2B-204ENST00000504431 CD244Q9BZW8 370 aa8.64□□□□□ -1.03
UBE2B-204ENST00000504431 CNTD2Q9H8S5 307 aa8.64□□□□□ -1.03
UBE2B-204ENST00000504431 FAN1Q9Y2M0 1017 aa8.64□□□□□ -1.03
UBE2B-204ENST00000504431 MGAMO43451 1857 aa8.64□□□□□ -1.03
UBE2B-204ENST00000504431 PARP14Q460N5 1801 aa8.64□□□□□ -1.03
UBE2B-204ENST00000504431 TNKSO95271 1327 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 TMEM232C9JQI7 657 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 N4BP3O15049 544 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 ASGR2P07307 311 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 TMEM253P0C7T8 217 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 GLDCP23378 1020 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 PSMC4P43686 418 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 OCRLQ01968 901 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 CACNB2Q08289 660 aaPredicted RBP8.63□□□□□ -1.03
UBE2B-204ENST00000504431 TRDNQ13061 729 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 COG2Q14746 738 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 CCDC96Q2M329 555 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 WDR78Q5VTH9 848 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 PKN3Q6P5Z2 889 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 ZNF662Q6ZS27 426 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 RALYLQ86SE5 291 aaKnown RBP8.63□□□□□ -1.03
UBE2B-204ENST00000504431 RNF180Q86T96 592 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 ENAHQ8N8S7 591 aaPredicted RBP8.63□□□□□ -1.03
UBE2B-204ENST00000504431 ARRDC4Q8NCT1 418 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 NCOA7Q8NI08 942 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 SH3RF2Q8TEC5 729 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 LEO1Q8WVC0 666 aaPredicted RBP8.63□□□□□ -1.03
UBE2B-204ENST00000504431 KCNN1Q92952 543 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 KRT23Q9C075 422 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 PORCNQ9H237 461 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 SH2D4AQ9H788 454 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 ZCCHC17Q9NP64 241 aaKnown RBP8.63□□□□□ -1.03
UBE2B-204ENST00000504431 GABRQQ9UN88 632 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 SLC45A1Q9Y2W3 748 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 SMCHD1A6NHR9 2005 aa8.63□□□□□ -1.03
UBE2B-204ENST00000504431 PLIN4Q96Q06 1357 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 PTPDC1A2A3K4 754 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 IFIT3O14879 490 aaKnown RBP8.62□□□□□ -1.03
UBE2B-204ENST00000504431 WDR46O15213 610 aaKnown RBP8.62□□□□□ -1.03
UBE2B-204ENST00000504431 TOP1P11387 765 aaKnown RBP8.62□□□□□ -1.03
UBE2B-204ENST00000504431 RXRAP19793 462 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 SLC1A4P43007 532 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 CDR1P51861 262 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 NKX3-2P78367 333 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 IRF9Q00978 393 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 IKQ13123 557 aaPredicted RBP8.62□□□□□ -1.03
UBE2B-204ENST00000504431 DHCR24Q15392 516 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 ZNF174Q15697 407 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 BTBD8Q5XKL5 378 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 MB21D2Q8IYB1 491 aaPredicted RBP8.62□□□□□ -1.03
UBE2B-204ENST00000504431 CPXCR1Q8N123 301 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 GPRC5AQ8NFJ5 357 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 BHLHE22Q8NFJ8 381 aaPredicted RBP8.62□□□□□ -1.03
UBE2B-204ENST00000504431 LPAR1Q92633 364 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 ERO1AQ96HE7 468 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 UBAC1Q9BSL1 405 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 MYL10Q9BUA6 226 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 UBA5Q9GZZ9 404 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 TCP11L1Q9NUJ3 509 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 RIC8BQ9NVN3 520 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 PCDHA5Q9Y5H7 936 aa8.62□□□□□ -1.03
UBE2B-204ENST00000504431 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 TNPO2O14787 897 aaKnown RBP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 PRC1O43663 620 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 F2P00734 622 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 PCP11498 1178 aaKnown RBP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 PTPN1P18031 435 aaKnown RBP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 HSPA4P34932 840 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 GCLCP48506 637 aaPredicted RBP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 NOVP48745 357 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 DLG4P78352 724 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 PRKCZQ05513 592 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 KIF22Q14807 665 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 TMEM132BQ14DG7 1078 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 PCBP1Q15365 356 aaKnown RBP eCLIP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 SEC23AQ15436 765 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 PAN2Q504Q3 1202 aaKnown RBP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 CCDC174Q6PII3 467 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 SYDE1Q6ZW31 735 aaPredicted RBP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 CTU1Q7Z7A3 348 aaKnown RBP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 IQCA1Q86XH1 822 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 NOSTRINQ8IVI9 506 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 GMCL1P1Q8NEA9 526 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 SCYL1Q96KG9 808 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 JAKMIP1Q96N16 626 aaKnown RBP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 NEK1Q96PY6 1258 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 SLF1Q9BQI6 1058 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 MOV10L1Q9BXT6 1211 aaKnown RBP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 KAT14Q9H8E8 782 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 RAVER2Q9HCJ3 691 aaKnown RBP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 VAT1LQ9HCJ6 419 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 KCNH7Q9NS40 1196 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 HOXC10Q9NYD6 342 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 HSPBP1Q9NZL4 362 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms