RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PDILTQ8N807 584 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 TSPAN18Q96SJ8 248 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 FIZ1Q96SL8 496 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 C7orf25Q9BPX7 421 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 OSBPL6Q9BZF3 934 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 PLA2G2FQ9BZM2 168 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 POLD4Q9HCU8 107 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 HEBP1Q9NRV9 189 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 TOPORSQ9NS56 1045 aaPredicted RBP10.89□□□□□ -0.67
CPSF4-213ENST00000484112 ZSCAN32Q9NX65 697 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 TBX20Q9UMR3 447 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 USP18Q9UMW8 372 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 SMG5Q9UPR3 1016 aaKnown RBP10.89□□□□□ -0.67
CPSF4-213ENST00000484112 EXOC7Q9UPT5 735 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 HPSEQ9Y251 543 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 PCDHB13Q9Y5F0 798 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 PCDHGA2Q9Y5H1 932 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 CDY1Q9Y6F8 540 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 DOCK6Q96HP0 2047 aa10.89□□□□□ -0.67
CPSF4-213ENST00000484112 CACNA1IQ9P0X4 2223 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 PVALEFA0A1B0GWK0 134 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 I3L4J1 428 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 CLDN3O15551 220 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 KRT37O76014 449 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 RHOP08100 348 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 MAGEA9P43362 315 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 YARSP54577 528 aaKnown RBP10.88□□□□□ -0.67
CPSF4-213ENST00000484112 ARPP19P56211 112 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 CACNB1Q02641 598 aaPredicted RBP10.88□□□□□ -0.67
CPSF4-213ENST00000484112 MCL1Q07820 350 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 GRM2Q14416 872 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 LPAL2Q16609 132 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 ZNF568Q3ZCX4 644 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 SLFN12LQ6IEE8 588 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 RSPO2Q6UXX9 243 aaPredicted RBP10.88□□□□□ -0.67
CPSF4-213ENST00000484112 ZNF852Q6ZMS4 543 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 DYMQ7RTS9 669 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 MAP4K3Q8IVH8 894 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 GPR161Q8N6U8 529 aaKnown RBP10.88□□□□□ -0.67
CPSF4-213ENST00000484112 DHX58Q96C10 678 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 BORCS6Q96GS4 357 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 NELL2Q99435 816 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 TCHPQ9BT92 498 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 CCDC94Q9BW85 323 aaPredicted RBP10.88□□□□□ -0.67
CPSF4-213ENST00000484112 STRA6Q9BX79 667 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 PANK2Q9BZ23 570 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 TRIM9Q9C026 710 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 ZHX3Q9H4I2 956 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 TMEM206Q9H813 350 aa10.88□□□□□ -0.67
CPSF4-213ENST00000484112 CDV3Q9UKY7 258 aaKnown RBP10.88□□□□□ -0.67
CPSF4-213ENST00000484112 NDRG2Q9UN36 371 aaKnown RBP10.88□□□□□ -0.67
CPSF4-213ENST00000484112 MRPS17Q9Y2R5 130 aaKnown RBP10.88□□□□□ -0.67
CPSF4-213ENST00000484112 DCDC2BA2VCK2 349 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 ABLIM1O14639 778 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 HNRNPDLO14979 420 aaKnown RBP10.87□□□□□ -0.67
CPSF4-213ENST00000484112 ECI2O75521 394 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 PPP1R37O75864 691 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 LRG1P02750 347 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 EDN1P05305 212 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 PFKFB1P16118 471 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 SDHBP21912 280 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 FGFR3P22607 806 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 TKTP29401 623 aaKnown RBP10.87□□□□□ -0.67
CPSF4-213ENST00000484112 ELF1P32519 619 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 BRCC3P46736 316 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 LIG4P49917 911 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 CLCNKBP51801 687 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 MTAPQ13126 283 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 NOLC1Q14978 699 aaKnown RBP eCLIP10.87□□□□□ -0.67
CPSF4-213ENST00000484112 NAB2Q15742 525 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 SLC5A9Q2M3M2 681 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 XKR4Q5GH76 650 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 EEF1DP3Q658K8 133 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 TANGO2Q6ICL3 276 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 SFR1Q86XK3 245 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 ZBTB44Q8NCP5 570 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 CLDN23Q96B33 292 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 BICD1Q96G01 975 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 ACAP3Q96P50 834 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 TARS2Q9BW92 718 aaKnown RBP10.87□□□□□ -0.67
CPSF4-213ENST00000484112 CDT1Q9H211 546 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 MRPL44Q9H9J2 332 aaKnown RBP10.87□□□□□ -0.67
CPSF4-213ENST00000484112 PLEKHA5Q9HAU0 1116 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 GOLGA2P5Q9HBQ8 144 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 SLC38A7Q9NVC3 462 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 PANK4Q9NVE7 773 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 MTRRQ9UBK8 725 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 GMEB2Q9UKD1 530 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 STYXL1Q9Y6J8 313 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 MIA3Q5JRA6 1907 aa10.87□□□□□ -0.67
CPSF4-213ENST00000484112 DCHS1Q96JQ0 3298 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 GOLGA6L4A6NEF3 574 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 PRR5-ARHGAP8B1AHC4 643 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 PRRG1O14668 218 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 KIAA0391O15091 583 aaKnown RBP10.86□□□□□ -0.67
CPSF4-213ENST00000484112 LILRB5O75023 590 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 IDEP14735 1019 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 CEBPBP17676 345 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 PTPN2P17706 415 aa10.86□□□□□ -0.67
CPSF4-213ENST00000484112 SYKP43405 635 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms