RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 RBP5P82980 135 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 CAP1Q01518 475 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 C1QBPQ07021 282 aaKnown RBP8.6□□□□□ -1.03
SFPQ-202ENST00000460428 INCA1Q0VD86 236 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 PTP4A2Q12974 167 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 TMEM132DQ14C87 1099 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 CLUL1Q15846 466 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 TMEM132AQ24JP5 1023 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 ZNF667Q5HYK9 610 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 TEX35Q5T0J7 233 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 UBXN11Q5T124 520 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 TAF3Q5VWG9 929 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 PLEKHA7Q6IQ23 1121 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 MON1BQ7L1V2 547 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 DNAAF5Q86Y56 855 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 CD101Q93033 1021 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 FAM212AQ96EL1 285 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 SNX27Q96L92 541 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 OSMRQ99650 979 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 TRAIPQ9BWF2 469 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 CELF4Q9BZC1 486 aaKnown RBP8.6□□□□□ -1.03
SFPQ-202ENST00000460428 FAM49AQ9H0Q0 323 aaPredicted RBP8.6□□□□□ -1.03
SFPQ-202ENST00000460428 CHST12Q9NRB3 414 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 SEPT11Q9NVA2 429 aaKnown RBP8.6□□□□□ -1.03
SFPQ-202ENST00000460428 ARGLU1Q9NWB6 273 aaPredicted RBP8.6□□□□□ -1.03
SFPQ-202ENST00000460428 FAM53CQ9NYF3 392 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 LCMT1Q9UIC8 334 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 KIAA1257Q9ULG3 409 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 ALG6Q9Y672 507 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 SQORQ9Y6N5 450 aa8.6□□□□□ -1.03
SFPQ-202ENST00000460428 TCRBV5S1A1TA0A578 114 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 BHMG1C9JSJ3 638 aaPredicted RBP8.59□□□□□ -1.03
SFPQ-202ENST00000460428 CCDC188H7C350 402 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 PIRO00625 290 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 AOC2O75106 756 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 CILPO75339 1184 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 CAPN15O75808 1086 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 CABYRO75952 493 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 ITGB3P05106 788 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 C6orf222P0C671 652 aaPredicted RBP8.59□□□□□ -1.03
SFPQ-202ENST00000460428 MMP8P22894 467 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 SLC1A1P43005 524 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 PEX5P50542 639 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 APLP1P51693 650 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 CLCN6P51797 869 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 PRMT2P55345 433 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 OSTNP61366 133 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 MRPS6P82932 125 aaKnown RBP8.59□□□□□ -1.03
SFPQ-202ENST00000460428 ZNF200P98182 395 aaPredicted RBP8.59□□□□□ -1.03
SFPQ-202ENST00000460428 MGAT3Q09327 533 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 FAM26DQ5JW98 314 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 GNASQ5JWF2 1037 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 FAM43BQ6ZT52 329 aaPredicted RBP8.59□□□□□ -1.03
SFPQ-202ENST00000460428 LIMS2Q7Z4I7 341 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 DAAM2Q86T65 1068 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 SERINC5Q86VE9 423 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 LRRC52Q8N7C0 313 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 USP38Q8NB14 1042 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 PCSK9Q8NBP7 692 aaKnown RBP8.59□□□□□ -1.03
SFPQ-202ENST00000460428 WHAMMQ8TF30 809 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 TMEM40Q8WWA1 233 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 ELMO3Q96BJ8 720 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 CYFIP2Q96F07 1278 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 SCLT1Q96NL6 688 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.59□□□□□ -1.032e-23■■□□□ 12.2
SFPQ-202ENST00000460428 SELENOOQ9BVL4 669 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 WNT8AQ9H1J5 351 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 MRPL47Q9HD33 250 aaKnown RBP8.59□□□□□ -1.03
SFPQ-202ENST00000460428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.59□□□□□ -1.032e-6■■■□□ 18.6
SFPQ-202ENST00000460428 RNF186Q9NXI6 227 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 DPP3Q9NY33 737 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 CTTNBP2NLQ9P2B4 639 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 CNOT8Q9UFF9 292 aaKnown RBP8.59□□□□□ -1.03
SFPQ-202ENST00000460428 UBQLN1Q9UMX0 589 aaKnown RBP8.59□□□□□ -1.03
SFPQ-202ENST00000460428 PCDHA3Q9Y5H8 950 aa8.59□□□□□ -1.03
SFPQ-202ENST00000460428 THSD7BQ9C0I4 1608 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 GRIN2DO15399 1336 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 CITO14578 2027 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 PDCD11Q14690 1871 aaKnown RBP8.58□□□□□ -1.04
SFPQ-202ENST00000460428 KCNK3O14649 394 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 CAND2O75155 1236 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 NPTXRO95502 500 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 CD4P01730 458 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 HMGCRP04035 888 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 TNFRSF8P28908 595 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 MAN1A1P33908 653 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 CTNNA1P35221 906 aaKnown RBP8.58□□□□□ -1.04
SFPQ-202ENST00000460428 NSFP46459 744 aaKnown RBP8.58□□□□□ -1.04
SFPQ-202ENST00000460428 YARSP54577 528 aaKnown RBP8.58□□□□□ -1.04
SFPQ-202ENST00000460428 RAD23BP54727 409 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 TRIM32Q13049 653 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 CNGA2Q16280 664 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 PPP2R5EQ16537 467 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 WDR72Q3MJ13 1102 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 CCDC181Q5TID7 509 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 LIN9Q5TKA1 542 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 CXCL17Q6UXB2 119 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 RSPH3Q86UC2 560 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 FAM228AQ86W67 206 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms