RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 THRSPQ92748 146 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 DYDC2Q96IM9 177 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF512BQ96KM6 892 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 UBE2OQ9C0C9 1292 aaKnown RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ANKRD6Q9Y2G4 727 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 V9GY48 417 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 FSBPO95073 299 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 CPA3P15088 417 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF12P17014 697 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 NR2C2P49116 596 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PDK1Q15118 436 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 RBBP8NLQ8NC74 664 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ATXN2LQ8WWM7 1075 aaKnown RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 DMAP1Q9NPF5 467 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF711Q9Y462 761 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 SCN5AQ14524 2016 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 IDH3BO43837 385 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 NDUFA8P51970 172 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 R3HDM1Q15032 1099 aaKnown RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 BBS9Q3SYG4 887 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 CD302Q8IX05 232 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 CYFIP2Q96F07 1278 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 SMARCAD1Q9H4L7 1026 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 LRRC4Q9HBW1 653 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ING3Q9NXR8 418 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 KIAA1257Q9ULG3 409 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 SYNPO2Q9UMS6 1093 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 USP42Q9H9J4 1324 aaKnown RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ABCA4P78363 2273 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 BUB1O43683 1085 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 LSM8O95777 96 aaKnown RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ATP1A3P13637 1013 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PIK3R1P27986 724 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 HPCAP84074 193 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 CCDC153Q494R4 210 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 DIS3LQ8TF46 1054 aaKnown RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 MCRS1Q96EZ8 462 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 NSL1Q96IY1 281 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF560Q96MR9 790 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF521Q96K83 1311 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 SLC22A2O15244 555 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 WFS1O76024 890 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PDE5AO76074 875 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 LRRC74AQ0VAA2 488 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 MED15Q96RN5 788 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 TPRKBQ9Y3C4 175 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 KPNA3O00505 521 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 GGCXP38435 758 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 TTLL9Q3SXZ7 439 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 RFX8Q6ZV50 586 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 CHCHD4Q8N4Q1 142 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 SPATA4Q8NEY3 305 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PLEKHA8Q96JA3 519 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 NCKIPSDQ9NZQ3 722 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 SH3BP4Q9P0V3 963 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PCDHA5Q9Y5H7 936 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 KIAA1217Q5T5P2 1943 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PCCAP05165 728 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PSAPP07602 524 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 CCNA2P20248 432 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 SDC4P31431 198 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 GJC1P36383 396 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 FDFT1P37268 417 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 TGM3Q08188 693 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 RIPK1Q13546 671 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 RABL6Q3YEC7 729 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 P3H2Q8IVL5 708 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 MOSPD2Q8NHP6 518 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 RNF139Q8WU17 664 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 GPAMQ9HCL2 828 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PCDHA1Q9Y5I3 950 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ZW10O43264 779 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 THRAP10827 490 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 RAB2AP61019 212 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 MAGOHP61326 146 aaKnown RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 TNFAIP8L3Q5GJ75 292 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 RC3H1Q5TC82 1133 aaKnown RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PADI6Q6TGC4 694 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 LRRC59Q96AG4 307 aaKnown RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 SLC39A8Q9C0K1 460 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 EFCAB1Q9HAE3 211 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 SLC38A7Q9NVC3 462 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 TBK1Q9UHD2 729 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 XDHP47989 1333 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 KLRF2D3W0D1 207 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 POLD1P28340 1107 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 IL12RB1P42701 662 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 INSCQ1MX18 579 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 KIF19Q2TAC6 998 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 KYAT3Q6YP21 454 aaKnown RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ARHGAP22Q7Z5H3 698 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 GPT2Q8TD30 523 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 MGARPQ8TDB4 240 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ACTRT1Q8TDG2 376 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PDCD6IPQ8WUM4 868 aaKnown RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 OTUD5Q96G74 571 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 CRNNQ9UBG3 495 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 LTN1O94822 1766 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PCNX2A6NKB5 2137 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 POLBP06746 335 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms