RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 TMEM110-MUSTN1A8MSY1 372 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 UNGP13051 313 aaPredicted RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 NSFP46459 744 aaKnown RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 GDF6Q6KF10 455 aaPredicted RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 TRIM72Q6ZMU5 477 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 NT5DC3Q86UY8 548 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 NT5DC4Q86YG4 428 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 CYFIP2Q96F07 1278 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 MS4A14Q96JA4 679 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 SNX27Q96L92 541 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 NUP85Q9BW27 656 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 CELF4Q9BZC1 486 aaKnown RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 NXF3Q9H4D5 531 aaKnown RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 ARGLU1Q9NWB6 273 aaPredicted RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 CNOT8Q9UFF9 292 aaKnown RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 ITGA11Q9UKX5 1188 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 PDCD11Q14690 1871 aaKnown RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 HMGCRP04035 888 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 CYP1A2P05177 515 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 ASGR1P07306 291 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 CFHP08603 1231 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 ATICP31939 592 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 HADHBP55084 474 aaKnown RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 MRPS6P82932 125 aaKnown RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 KCNA10Q16322 511 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 CFAP221Q4G0U5 840 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 RSPH3Q86UC2 560 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 ZNF564Q8TBZ8 553 aaPredicted RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 HPDLQ96IR7 371 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 CALR3Q96L12 384 aaKnown RBP15.99■□□□□ 0.15
NEK2-201ENST00000366998 PLEKHA5Q9HAU0 1116 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 STXBP5LQ9Y2K9 1186 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 CDY2AQ9Y6F7 541 aa15.99■□□□□ 0.15
NEK2-201ENST00000366998 CENPFP49454 3210 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 RECQL4O94761 1208 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 CYP1A1P04798 512 aaPredicted RBP15.98■□□□□ 0.15
NEK2-201ENST00000366998 P4HA1P13674 534 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 BRD2P25440 801 aaKnown RBP15.98■□□□□ 0.15
NEK2-201ENST00000366998 NKX3-2P78367 333 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 RBP5P82980 135 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 TCEAL1Q15170 157 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 MCOLN2Q8IZK6 566 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 RAET1EQ8TD07 263 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 ZNF606Q8WXB4 792 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 TRIM11Q96F44 468 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 CFHR5Q9BXR6 569 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 PARD6BQ9BYG5 372 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 SMYD3Q9H7B4 428 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 ANKZF1Q9H8Y5 726 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 RNF14Q9UBS8 474 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 TRPV2Q9Y5S1 764 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 THSD7BQ9C0I4 1608 aa15.98■□□□□ 0.15
NEK2-201ENST00000366998 CTSHP09668 335 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 H2AFXP16104 143 aaPredicted RBP15.97■□□□□ 0.15
NEK2-201ENST00000366998 AKAP5P24588 427 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 CDH8P55286 799 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 NOMO3P69849 1222 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 CENPCQ03188 943 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 MESDQ14696 234 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 C11orf63Q6NUN7 778 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 ZNF572Q7Z3I7 529 aaPredicted RBP15.97■□□□□ 0.15
NEK2-201ENST00000366998 CXorf38Q8TB03 319 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 PBKQ96KB5 322 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 SELENOOQ9BVL4 669 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 BCO2Q9BYV7 579 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 CXCL16Q9H2A7 254 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 ABCB6Q9NP58 842 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 UVRAGQ9P2Y5 699 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 DERAQ9Y315 318 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 MTA2O94776 668 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 RNASE9P60153 205 aaKnown RBP15.97■□□□□ 0.15
NEK2-201ENST00000366998 TNNC1P63316 161 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 GLRA4Q5JXX5 417 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 MTERF4Q7Z6M4 381 aaKnown RBP15.97■□□□□ 0.15
NEK2-201ENST00000366998 FAM228AQ86W67 206 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 KLHDC9Q8NEP7 349 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 SPATA4Q8NEY3 305 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 BEST2Q8NFU1 509 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 HES6Q96HZ4 224 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 C11orf70Q9BRQ4 267 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 SDCBP2Q9H190 292 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 PARP2Q9UGN5 583 aa15.97■□□□□ 0.15
NEK2-201ENST00000366998 NOC2LQ9Y3T9 749 aaKnown RBP15.97■□□□□ 0.15
NEK2-201ENST00000366998 SCN1AP35498 2009 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 CES2O00748 559 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 CEP104O60308 925 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 MYBL1P10243 752 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 CD19P15391 556 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 C2CD6Q53TS8 623 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 LIN9Q5TKA1 542 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 TWF2Q6IBS0 349 aaKnown RBP15.96■□□□□ 0.15
NEK2-201ENST00000366998 PHLDB2Q86SQ0 1253 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 PCSK9Q8NBP7 692 aaKnown RBP15.96■□□□□ 0.15
NEK2-201ENST00000366998 MSANTD4Q8NCY6 345 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 WNT8BQ93098 351 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 FAXDC2Q96IV6 333 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 BTBD6Q96KE9 485 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 ZMAT2Q96NC0 199 aaKnown RBP15.96■□□□□ 0.15
NEK2-201ENST00000366998 VRTNQ9H8Y1 702 aa15.96■□□□□ 0.15
NEK2-201ENST00000366998 DDX20Q9UHI6 824 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms