RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W HPC2Q01448 625 aa7.06□□□□□ -1.28
SCD6YPR129W SBE2P42223 864 aaKnown RBP7.05□□□□□ -1.28
SCD6YPR129W UTP13Q05946 817 aaKnown RBP7.05□□□□□ -1.28
SCD6YPR129W TDA6Q06466 467 aa7.05□□□□□ -1.28
SCD6YPR129W YDJ1P25491 409 aaKnown RBP7.04□□□□□ -1.28
SCD6YPR129W SKN7P38889 622 aa7.04□□□□□ -1.28
SCD6YPR129W ATG3P40344 310 aa7.04□□□□□ -1.28
SCD6YPR129W ALA1P40825 983 aaKnown RBP7.04□□□□□ -1.28
SCD6YPR129W JJJ2P46997 583 aa7.04□□□□□ -1.28
SCD6YPR129W RQC2Q12532 1038 aaKnown RBP7.04□□□□□ -1.28
SCD6YPR129W RPN1P38764 993 aaKnown RBP7.03□□□□□ -1.28
SCD6YPR129W NRD1P53617 575 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
SCD6YPR129W BRL1P38770 471 aa7.02□□□□□ -1.29
SCD6YPR129W SLX8P40072 274 aa7.02□□□□□ -1.29
SCD6YPR129W YMR187CQ03236 431 aa7.02□□□□□ -1.29
SCD6YPR129W IRE1P32361 1115 aa7.01□□□□□ -1.29
SCD6YPR129W SOH1P38633 127 aa7.01□□□□□ -1.29
SCD6YPR129W YPP1P46951 817 aa7.01□□□□□ -1.29
SCD6YPR129W HDA3Q06623 655 aa7□□□□□ -1.29
SCD6YPR129W GPM1P00950 247 aaKnown RBP6.99□□□□□ -1.29
SCD6YPR129W FPS1P23900 669 aa6.99□□□□□ -1.29
SCD6YPR129W MCX1P38323 520 aaPredicted RBP6.99□□□□□ -1.29
SCD6YPR129W YNR014WP53719 212 aa6.99□□□□□ -1.29
SCD6YPR129W SHM1P37292 490 aaPredicted RBP6.98□□□□□ -1.29
SCD6YPR129W SBP1P10080 294 aaKnown RBP6.97□□□□□ -1.29
SCD6YPR129W TFB3Q03290 321 aa6.97□□□□□ -1.29
SCD6YPR129W PSH1Q12161 406 aa6.96□□□□□ -1.3
SCD6YPR129W PDC6P26263 563 aaKnown RBP6.95□□□□□ -1.3
SCD6YPR129W MRPL16P38064 232 aa6.95□□□□□ -1.3
SCD6YPR129W SUP45P12385 437 aaKnown RBP6.94□□□□□ -1.3
SCD6YPR129W BIO2P32451 375 aa6.94□□□□□ -1.3
SCD6YPR129W BOI2P39969 1040 aa6.94□□□□□ -1.3
SCD6YPR129W PKC1P24583 1151 aa6.93□□□□□ -1.3
SCD6YPR129W STB3Q12427 513 aa6.93□□□□□ -1.3
SCD6YPR129W YCK2P23292 546 aaKnown RBP6.92□□□□□ -1.3
SCD6YPR129W MET1P36150 593 aa6.92□□□□□ -1.3
SCD6YPR129W YPQ2Q06328 317 aa6.92□□□□□ -1.3
SCD6YPR129W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
SCD6YPR129W ENO2P00925 437 aaKnown RBP6.91□□□□□ -1.3
SCD6YPR129W KNS1P32350 737 aaPredicted RBP6.91□□□□□ -1.3
SCD6YPR129W YDR215CQ12240 137 aa6.91□□□□□ -1.3
SCD6YPR129W RPS31P05759 152 aaKnown RBP6.9□□□□□ -1.3
SCD6YPR129W PDC5P16467 563 aaKnown RBP6.9□□□□□ -1.3
SCD6YPR129W SPR3P41901 512 aa6.9□□□□□ -1.3
SCD6YPR129W SWI5P08153 709 aa6.89□□□□□ -1.31
SCD6YPR129W YNL108CP53929 270 aa6.89□□□□□ -1.31
SCD6YPR129W LEU1P07264 779 aaKnown RBP6.88□□□□□ -1.31
SCD6YPR129W RIM21P48565 533 aa6.88□□□□□ -1.31
SCD6YPR129W AIM9P40053 627 aaKnown RBP6.87□□□□□ -1.31
SCD6YPR129W TY1A-DR2Q03964 440 aaKnown RBP6.87□□□□□ -1.31
SCD6YPR129W RPP1AP05318 106 aaPredicted RBP6.86□□□□□ -1.31
SCD6YPR129W MCM1P11746 286 aa6.85□□□□□ -1.31
SCD6YPR129W SLN1P39928 1220 aaPredicted RBP6.85□□□□□ -1.31
SCD6YPR129W RPS6AP0CX37 236 aaKnown RBP6.84□□□□□ -1.31
SCD6YPR129W RPS6BP0CX38 236 aaPredicted RBP6.84□□□□□ -1.31
SCD6YPR129W RDS2P19541 446 aaKnown RBP6.84□□□□□ -1.31
SCD6YPR129W AMN1P38285 549 aaPredicted RBP6.84□□□□□ -1.31
SCD6YPR129W YFL034WP43564 1073 aa6.84□□□□□ -1.31
SCD6YPR129W ALD2P47771 506 aa6.83□□□□□ -1.32
SCD6YPR129W RGP1P16664 663 aa6.82□□□□□ -1.32
SCD6YPR129W TAT1P38085 619 aa6.82□□□□□ -1.32
SCD6YPR129W MSC7P38694 644 aa6.82□□□□□ -1.32
SCD6YPR129W MCA1Q08601 432 aa6.82□□□□□ -1.32
SCD6YPR129W YTA6P40328 754 aa6.81□□□□□ -1.32
SCD6YPR129W LSB6P42951 607 aa6.81□□□□□ -1.32
SCD6YPR129W YNL165WP53891 406 aa6.81□□□□□ -1.32
SCD6YPR129W NTH2P35172 780 aa6.79□□□□□ -1.32
SCD6YPR129W MLF3P32047 452 aa6.77□□□□□ -1.33
SCD6YPR129W PRY1P47032 299 aa6.77□□□□□ -1.33
SCD6YPR129W YJL007CP47080 104 aa6.76□□□□□ -1.33
SCD6YPR129W MRX10Q05648 414 aa6.76□□□□□ -1.33
SCD6YPR129W TSC13Q99190 310 aa6.75□□□□□ -1.33
SCD6YPR129W PDI1P17967 522 aaKnown RBP6.74□□□□□ -1.33
SCD6YPR129W TPS3P38426 1054 aaKnown RBP6.74□□□□□ -1.33
SCD6YPR129W HEH2Q03281 663 aa6.74□□□□□ -1.33
SCD6YPR129W Q0182Q9ZZW1 134 aa6.74□□□□□ -1.33
SCD6YPR129W YPL034WQ03083 165 aa6.73□□□□□ -1.33
SCD6YPR129W ENO1P00924 437 aaKnown RBP6.72□□□□□ -1.33
SCD6YPR129W NHA1Q99271 985 aa6.72□□□□□ -1.33
SCD6YPR129W CYT1P07143 309 aa6.71□□□□□ -1.34
SCD6YPR129W MAC1P35192 417 aa6.7□□□□□ -1.34
SCD6YPR129W PGM2P37012 569 aaKnown RBP6.7□□□□□ -1.34
SCD6YPR129W ALG14P38242 237 aa6.7□□□□□ -1.34
SCD6YPR129W PRK1P40494 810 aa6.69□□□□□ -1.34
SCD6YPR129W MTO1P53070 669 aa6.69□□□□□ -1.34
SCD6YPR129W BUD9P53226 547 aa6.69□□□□□ -1.34
SCD6YPR129W UTP4Q06679 776 aaKnown RBP6.69□□□□□ -1.34
SCD6YPR129W PEP12P32854 288 aa6.68□□□□□ -1.34
SCD6YPR129W BIM1P40013 344 aa6.68□□□□□ -1.34
SCD6YPR129W SKP1P52286 194 aa6.68□□□□□ -1.34
SCD6YPR129W TIF1P10081 395 aaKnown RBP6.67□□□□□ -1.34
SCD6YPR129W NCL1P38205 684 aaKnown RBP6.67□□□□□ -1.34
SCD6YPR129W ATG32P40458 529 aa6.67□□□□□ -1.34
SCD6YPR129W RTG2P32608 588 aaKnown RBP6.66□□□□□ -1.34
SCD6YPR129W NAR1P23503 491 aaKnown RBP6.65□□□□□ -1.34
SCD6YPR129W RPL34BP40525 121 aaKnown RBP6.65□□□□□ -1.34
SCD6YPR129W GIS4Q04233 774 aa6.65□□□□□ -1.34
SCD6YPR129W UBP1P25037 809 aa6.64□□□□□ -1.35
SCD6YPR129W SCD5P34758 872 aa6.64□□□□□ -1.35
SCD6YPR129W ALO1P54783 526 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms