RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W GAL2P13181 574 aa1.92□□□□□ -2.1
SEC8YPR055W YNL165WP53891 406 aa1.92□□□□□ -2.1
SEC8YPR055W TY1A-BLQ12266 440 aa1.92□□□□□ -2.1
SEC8YPR055W TSC13Q99190 310 aa1.92□□□□□ -2.1
SEC8YPR055W SSN3P39073 555 aa1.91□□□□□ -2.1
SEC8YPR055W YIR007WP40566 764 aa1.91□□□□□ -2.1
SEC8YPR055W SCW11P53189 542 aa1.91□□□□□ -2.1
SEC8YPR055W SUB2Q07478 446 aaKnown RBP1.91□□□□□ -2.1
SEC8YPR055W SPT2P06843 333 aaPredicted RBP1.91□□□□□ -2.1
SEC8YPR055W SHM1P37292 490 aaPredicted RBP1.91□□□□□ -2.1
SEC8YPR055W NAM8Q00539 523 aaKnown RBP1.91□□□□□ -2.1
SEC8YPR055W UTP13Q05946 817 aaKnown RBP1.91□□□□□ -2.1
SEC8YPR055W YDL176WQ12027 708 aa1.91□□□□□ -2.1
SEC8YPR055W SSA4P22202 642 aaKnown RBP1.9□□□□□ -2.1
SEC8YPR055W SUM1P46676 1062 aa1.9□□□□□ -2.1
SEC8YPR055W FOX2Q02207 900 aaKnown RBP1.9□□□□□ -2.1
SEC8YPR055W YLR346CQ06139 101 aa1.9□□□□□ -2.1
SEC8YPR055W CYT1P07143 309 aa1.9□□□□□ -2.11
SEC8YPR055W PHO87P25360 923 aa1.9□□□□□ -2.11
SEC8YPR055W SLA1P32790 1244 aa1.9□□□□□ -2.11
SEC8YPR055W TPS3P38426 1054 aaKnown RBP1.9□□□□□ -2.11
SEC8YPR055W OSH7P38755 437 aa1.9□□□□□ -2.11
SEC8YPR055W NRD1P53617 575 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
SEC8YPR055W UBP2Q01476 1272 aa1.9□□□□□ -2.11
SEC8YPR055W Q0182Q9ZZW1 134 aa1.9□□□□□ -2.11
SEC8YPR055W CDC19P00549 500 aaKnown RBP1.89□□□□□ -2.11
SEC8YPR055W MLF3P32047 452 aa1.89□□□□□ -2.11
SEC8YPR055W AHP1P38013 176 aaKnown RBP1.89□□□□□ -2.11
SEC8YPR055W ROG3P43602 733 aa1.89□□□□□ -2.11
SEC8YPR055W JJJ2P46997 583 aa1.89□□□□□ -2.11
SEC8YPR055W GLY1P37303 387 aaKnown RBP1.89□□□□□ -2.11
SEC8YPR055W YPQ2Q06328 317 aa1.89□□□□□ -2.11
SEC8YPR055W HAP4P14064 554 aa1.88□□□□□ -2.11
SEC8YPR055W SUV3P32580 737 aa1.88□□□□□ -2.11
SEC8YPR055W CCP1P00431 361 aa1.88□□□□□ -2.11
SEC8YPR055W RPP2BP02400 110 aaKnown RBP1.88□□□□□ -2.11
SEC8YPR055W IRE1P32361 1115 aa1.88□□□□□ -2.11
SEC8YPR055W YFL034WP43564 1073 aa1.88□□□□□ -2.11
SEC8YPR055W PUN1Q06991 263 aa1.88□□□□□ -2.11
SEC8YPR055W GAS4Q08271 471 aa1.88□□□□□ -2.11
SEC8YPR055W PSH1Q12161 406 aa1.88□□□□□ -2.11
SEC8YPR055W RPS31P05759 152 aaKnown RBP1.88□□□□□ -2.11
SEC8YPR055W DAL1P32375 460 aa1.88□□□□□ -2.11
SEC8YPR055W SIS2P36024 562 aa1.88□□□□□ -2.11
SEC8YPR055W TY1A-MR1Q04215 440 aa1.88□□□□□ -2.11
SEC8YPR055W VAN1P23642 535 aa1.87□□□□□ -2.11
SEC8YPR055W PDC6P26263 563 aaKnown RBP1.87□□□□□ -2.11
SEC8YPR055W ACO2P39533 789 aa1.87□□□□□ -2.11
SEC8YPR055W MSN5P52918 1224 aa1.87□□□□□ -2.11
SEC8YPR055W CUZ1P53899 274 aa1.87□□□□□ -2.11
SEC8YPR055W TAF7Q05021 590 aa1.87□□□□□ -2.11
SEC8YPR055W HPF1Q05164 967 aa1.87□□□□□ -2.11
SEC8YPR055W RTT106P40161 455 aa1.87□□□□□ -2.11
SEC8YPR055W ALD4P46367 519 aaKnown RBP1.87□□□□□ -2.11
SEC8YPR055W MTO1P53070 669 aa1.87□□□□□ -2.11
SEC8YPR055W STB3Q12427 513 aa1.87□□□□□ -2.11
SEC8YPR055W MRPL16P38064 232 aa1.86□□□□□ -2.11
SEC8YPR055W CAB1Q04430 367 aa1.86□□□□□ -2.11
SEC8YPR055W ISC10P32645 267 aa1.86□□□□□ -2.11
SEC8YPR055W ALD2P47771 506 aa1.86□□□□□ -2.11
SEC8YPR055W RPL34AP87262 121 aaPredicted RBP1.86□□□□□ -2.11
SEC8YPR055W NAB2P32505 525 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
SEC8YPR055W NGR1P32831 672 aaKnown RBP1.86□□□□□ -2.11
SEC8YPR055W UBP15P50101 1230 aa1.86□□□□□ -2.11
SEC8YPR055W KRE33P53914 1056 aaKnown RBP1.86□□□□□ -2.11
SEC8YPR055W ADE12P80210 433 aaKnown RBP1.86□□□□□ -2.11
SEC8YPR055W YMR265CQ03508 461 aaKnown RBP1.86□□□□□ -2.11
SEC8YPR055W PNP1Q05788 311 aa1.86□□□□□ -2.11
SEC8YPR055W YBR197CP38306 217 aa1.85□□□□□ -2.11
SEC8YPR055W HXT5P38695 592 aa1.85□□□□□ -2.11
SEC8YPR055W BOL3P39724 118 aa1.85□□□□□ -2.11
SEC8YPR055W QDR2P40474 542 aa1.85□□□□□ -2.11
SEC8YPR055W VTC4P47075 721 aa1.85□□□□□ -2.11
SEC8YPR055W SSA1P10591 642 aaKnown RBP1.85□□□□□ -2.11
SEC8YPR055W RPB10P22139 70 aa1.85□□□□□ -2.11
SEC8YPR055W BOI1P38041 980 aaKnown RBP1.85□□□□□ -2.11
SEC8YPR055W YGR035CP53222 116 aa1.85□□□□□ -2.11
SEC8YPR055W TRS33Q99394 268 aa1.85□□□□□ -2.11
SEC8YPR055W UBP1P25037 809 aa1.84□□□□□ -2.11
SEC8YPR055W YTA6P40328 754 aa1.84□□□□□ -2.11
SEC8YPR055W SUT1P53032 299 aaKnown RBP1.84□□□□□ -2.11
SEC8YPR055W CWC15Q03772 175 aaKnown RBP1.84□□□□□ -2.11
SEC8YPR055W BSD2P38356 321 aa1.84□□□□□ -2.12
SEC8YPR055W CEM1P39525 442 aa1.84□□□□□ -2.12
SEC8YPR055W CWH41P53008 833 aa1.84□□□□□ -2.12
SEC8YPR055W DIT1P21623 536 aa1.84□□□□□ -2.12
SEC8YPR055W YNR040WP53736 256 aa1.84□□□□□ -2.12
SEC8YPR055W MCM1P11746 286 aa1.83□□□□□ -2.12
SEC8YPR055W MRPL33P20084 86 aa1.83□□□□□ -2.12
SEC8YPR055W VMA3P25515 160 aa1.83□□□□□ -2.12
SEC8YPR055W MDJ1P35191 511 aa1.83□□□□□ -2.12
SEC8YPR055W CUS1Q02554 436 aaPredicted RBP1.83□□□□□ -2.12
SEC8YPR055W PUF6Q04373 656 aaKnown RBP1.83□□□□□ -2.12
SEC8YPR055W KAR5Q04746 504 aa1.83□□□□□ -2.12
SEC8YPR055W HAT1Q12341 374 aa1.83□□□□□ -2.12
SEC8YPR055W SRS2P12954 1174 aa1.83□□□□□ -2.12
SEC8YPR055W GLO3P38682 493 aaKnown RBP1.83□□□□□ -2.12
SEC8YPR055W SPR3P41901 512 aa1.83□□□□□ -2.12
SEC8YPR055W MRP10O75012 95 aa1.82□□□□□ -2.12
SEC8YPR055W LEU1P07264 779 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms