RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C FRA1Q07825 749 aa6.9□□□□□ -1.3
CCL1YPR025C SSA4P22202 642 aaKnown RBP6.88□□□□□ -1.31
CCL1YPR025C ADE12P80210 433 aaKnown RBP6.88□□□□□ -1.31
CCL1YPR025C RDS2P19541 446 aaKnown RBP6.87□□□□□ -1.31
CCL1YPR025C SKN7P38889 622 aa6.87□□□□□ -1.31
CCL1YPR025C TDA6Q06466 467 aa6.87□□□□□ -1.31
CCL1YPR025C STE6P12866 1290 aa6.86□□□□□ -1.31
CCL1YPR025C SBE2P42223 864 aaKnown RBP6.86□□□□□ -1.31
CCL1YPR025C MRX12P47084 519 aa6.86□□□□□ -1.31
CCL1YPR025C YMR187CQ03236 431 aa6.86□□□□□ -1.31
CCL1YPR025C SUB2Q07478 446 aaKnown RBP6.86□□□□□ -1.31
CCL1YPR025C DAL1P32375 460 aa6.84□□□□□ -1.31
CCL1YPR025C SIS2P36024 562 aa6.84□□□□□ -1.31
CCL1YPR025C KTR7P40504 517 aa6.84□□□□□ -1.31
CCL1YPR025C PEP12P32854 288 aa6.83□□□□□ -1.32
CCL1YPR025C SYT1Q06836 1226 aa6.83□□□□□ -1.32
CCL1YPR025C SOH1P38633 127 aa6.82□□□□□ -1.32
CCL1YPR025C ATG3P40344 310 aa6.82□□□□□ -1.32
CCL1YPR025C YMR265CQ03508 461 aaKnown RBP6.82□□□□□ -1.32
CCL1YPR025C DIT1P21623 536 aa6.81□□□□□ -1.32
CCL1YPR025C TGL4P36165 910 aa6.81□□□□□ -1.32
CCL1YPR025C APL6P46682 809 aa6.8□□□□□ -1.32
CCL1YPR025C ATG20Q07528 640 aa6.8□□□□□ -1.32
CCL1YPR025C PUP1P25043 261 aa6.79□□□□□ -1.32
CCL1YPR025C UTP13Q05946 817 aaKnown RBP6.79□□□□□ -1.32
CCL1YPR025C ISR1Q06098 443 aaKnown RBP6.79□□□□□ -1.32
CCL1YPR025C NOB1Q08444 459 aaKnown RBP6.79□□□□□ -1.32
CCL1YPR025C DLD3P39976 496 aaKnown RBP6.78□□□□□ -1.32
CCL1YPR025C UBP15P50101 1230 aa6.78□□□□□ -1.32
CCL1YPR025C YNR014WP53719 212 aa6.78□□□□□ -1.32
CCL1YPR025C KRE33P53914 1056 aaKnown RBP6.78□□□□□ -1.32
CCL1YPR025C ECM23Q02710 187 aa6.78□□□□□ -1.32
CCL1YPR025C SSA1P10591 642 aaKnown RBP6.77□□□□□ -1.33
CCL1YPR025C ISU1Q03020 165 aa6.77□□□□□ -1.33
CCL1YPR025C YML083CQ04526 418 aa6.76□□□□□ -1.33
CCL1YPR025C YDR461C-AQ2V2P7 80 aa6.76□□□□□ -1.33
CCL1YPR025C HAL5P38970 855 aaKnown RBP6.75□□□□□ -1.33
CCL1YPR025C GAL2P13181 574 aa6.74□□□□□ -1.33
CCL1YPR025C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
CCL1YPR025C RPP2BP02400 110 aaKnown RBP6.73□□□□□ -1.33
CCL1YPR025C MCX1P38323 520 aaPredicted RBP6.73□□□□□ -1.33
CCL1YPR025C PDI1P17967 522 aaKnown RBP6.72□□□□□ -1.33
CCL1YPR025C RPL34AP87262 121 aaPredicted RBP6.72□□□□□ -1.33
CCL1YPR025C HDA3Q06623 655 aa6.72□□□□□ -1.33
CCL1YPR025C PHO87P25360 923 aa6.71□□□□□ -1.34
CCL1YPR025C GEF1P37020 779 aa6.71□□□□□ -1.34
CCL1YPR025C UBX7P38349 436 aa6.71□□□□□ -1.34
CCL1YPR025C TSC13Q99190 310 aa6.71□□□□□ -1.34
CCL1YPR025C HAP4P14064 554 aa6.7□□□□□ -1.34
CCL1YPR025C YCK2P23292 546 aaKnown RBP6.7□□□□□ -1.34
CCL1YPR025C ACS2P52910 683 aaKnown RBP6.7□□□□□ -1.34
CCL1YPR025C DAT1P13483 248 aaKnown RBP6.69□□□□□ -1.34
CCL1YPR025C YFL034WP43564 1073 aa6.69□□□□□ -1.34
CCL1YPR025C MSN5P52918 1224 aa6.69□□□□□ -1.34
CCL1YPR025C UTR2P32623 467 aa6.68□□□□□ -1.34
CCL1YPR025C SLA1P32790 1244 aa6.68□□□□□ -1.34
CCL1YPR025C AIM9P40053 627 aaKnown RBP6.68□□□□□ -1.34
CCL1YPR025C TY1A-DR3Q12441 440 aa6.68□□□□□ -1.34
CCL1YPR025C AMN1P38285 549 aaPredicted RBP6.67□□□□□ -1.34
CCL1YPR025C SSN3P39073 555 aa6.67□□□□□ -1.34
CCL1YPR025C BOI2P39969 1040 aa6.67□□□□□ -1.34
CCL1YPR025C YDR215CQ12240 137 aa6.67□□□□□ -1.34
CCL1YPR025C NTH2P35172 780 aa6.66□□□□□ -1.34
CCL1YPR025C GPM1P00950 247 aaKnown RBP6.65□□□□□ -1.34
CCL1YPR025C SPT2P06843 333 aaPredicted RBP6.65□□□□□ -1.34
CCL1YPR025C AHP1P38013 176 aaKnown RBP6.65□□□□□ -1.34
CCL1YPR025C TBS1P38114 1094 aa6.65□□□□□ -1.34
CCL1YPR025C ROM1P53046 1155 aa6.65□□□□□ -1.34
CCL1YPR025C SLN1P39928 1220 aaPredicted RBP6.64□□□□□ -1.35
CCL1YPR025C GAS4Q08271 471 aa6.64□□□□□ -1.35
CCL1YPR025C MCA1Q08601 432 aa6.64□□□□□ -1.35
CCL1YPR025C WTM2Q12206 467 aa6.64□□□□□ -1.35
CCL1YPR025C MAC1P35192 417 aa6.63□□□□□ -1.35
CCL1YPR025C SLX8P40072 274 aa6.63□□□□□ -1.35
CCL1YPR025C SWI5P08153 709 aa6.62□□□□□ -1.35
CCL1YPR025C RPS6AP0CX37 236 aaKnown RBP6.62□□□□□ -1.35
CCL1YPR025C RPS6BP0CX38 236 aaPredicted RBP6.62□□□□□ -1.35
CCL1YPR025C LSB6P42951 607 aa6.62□□□□□ -1.35
CCL1YPR025C GLT1Q12680 2145 aaKnown RBP6.61□□□□□ -1.35
CCL1YPR025C FPS1P23900 669 aa6.61□□□□□ -1.35
CCL1YPR025C VAN1P23642 535 aa6.6□□□□□ -1.35
CCL1YPR025C CDC3P32457 520 aaKnown RBP6.6□□□□□ -1.35
CCL1YPR025C TAT1P38085 619 aa6.6□□□□□ -1.35
CCL1YPR025C UTP7P40055 554 aaKnown RBP6.6□□□□□ -1.35
CCL1YPR025C MET1P36150 593 aa6.59□□□□□ -1.35
CCL1YPR025C PUF6Q04373 656 aaKnown RBP6.59□□□□□ -1.35
CCL1YPR025C CYT1P07143 309 aa6.58□□□□□ -1.36
CCL1YPR025C CWC15Q03772 175 aaKnown RBP6.58□□□□□ -1.36
CCL1YPR025C PUN1Q06991 263 aa6.58□□□□□ -1.36
CCL1YPR025C TRS33Q99394 268 aa6.57□□□□□ -1.36
CCL1YPR025C TPS3P38426 1054 aaKnown RBP6.55□□□□□ -1.36
CCL1YPR025C SUM1P46676 1062 aa6.55□□□□□ -1.36
CCL1YPR025C PNP1Q05788 311 aa6.55□□□□□ -1.36
CCL1YPR025C UBP1P25037 809 aa6.54□□□□□ -1.36
CCL1YPR025C ALA1P40825 983 aaKnown RBP6.54□□□□□ -1.36
CCL1YPR025C CWH41P53008 833 aa6.54□□□□□ -1.36
CCL1YPR025C HAT1Q12341 374 aa6.54□□□□□ -1.36
CCL1YPR025C SRS2P12954 1174 aa6.53□□□□□ -1.36
CCL1YPR025C NGR1P32831 672 aaKnown RBP6.53□□□□□ -1.36
CCL1YPR025C PDC5P16467 563 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms