RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	LEO1	P38439	464 aa		3.32	□□□□□ -1.88
RLM1	YPL089C	UBP5	P39944	805 aa		3.32	□□□□□ -1.88
RLM1	YPL089C	TAF7	Q05021	590 aa		3.32	□□□□□ -1.88
RLM1	YPL089C	YJU3	P28321	313 aa		3.31	□□□□□ -1.88
RLM1	YPL089C	GUA1	P38625	525 aa	Known RBP	3.31	□□□□□ -1.88
RLM1	YPL089C	RSC30	P38781	883 aa		3.31	□□□□□ -1.88
RLM1	YPL089C	MSN5	P52918	1224 aa		3.31	□□□□□ -1.88
RLM1	YPL089C	MED7	Q08278	222 aa		3.31	□□□□□ -1.88
RLM1	YPL089C	SSA2	P10592	639 aa	Known RBP	3.3	□□□□□ -1.88
RLM1	YPL089C	PKH3	Q03306	898 aa	Predicted RBP	3.3	□□□□□ -1.88
RLM1	YPL089C	YKL222C	P35995	705 aa		3.29	□□□□□ -1.88
RLM1	YPL089C	SLA1	P32790	1244 aa		3.29	□□□□□ -1.88
RLM1	YPL089C	HPC2	Q01448	625 aa		3.28	□□□□□ -1.88
RLM1	YPL089C	RAD59	Q12223	238 aa		3.28	□□□□□ -1.88
RLM1	YPL089C	ARG8	P18544	423 aa		3.27	□□□□□ -1.89
RLM1	YPL089C	COQ2	P32378	372 aa		3.27	□□□□□ -1.89
RLM1	YPL089C	FIG4	P42837	879 aa		3.27	□□□□□ -1.89
RLM1	YPL089C	ISU1	Q03020	165 aa		3.27	□□□□□ -1.89
RLM1	YPL089C	YKR073C	P36153	106 aa		3.26	□□□□□ -1.89
RLM1	YPL089C	BUD9	P53226	547 aa		3.26	□□□□□ -1.89
RLM1	YPL089C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.25	□□□□□ -1.89	RIP-Chip
RLM1	YPL089C	TY1A-DR3	Q12441	440 aa		3.25	□□□□□ -1.89
RLM1	YPL089C	TOS1	P38288	455 aa		3.24	□□□□□ -1.89
RLM1	YPL089C	SSN3	P39073	555 aa		3.24	□□□□□ -1.89
RLM1	YPL089C	KAE1	P36132	386 aa		3.24	□□□□□ -1.89
RLM1	YPL089C	TFB3	Q03290	321 aa		3.24	□□□□□ -1.89
RLM1	YPL089C	NHA1	Q99271	985 aa		3.24	□□□□□ -1.89
RLM1	YPL089C	MAK16	P10962	306 aa	Predicted RBP	3.23	□□□□□ -1.89
RLM1	YPL089C	YCR015C	P25616	317 aa		3.23	□□□□□ -1.89
RLM1	YPL089C	PGM1	P33401	570 aa	Known RBP	3.23	□□□□□ -1.89
RLM1	YPL089C	CSE4	P36012	229 aa		3.23	□□□□□ -1.89
RLM1	YPL089C	TY1A-DR2	Q03964	440 aa	Known RBP	3.23	□□□□□ -1.89
RLM1	YPL089C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	RIP-Chip
RLM1	YPL089C	BRL1	P38770	471 aa		3.22	□□□□□ -1.89
RLM1	YPL089C	TRP3	P00937	484 aa		3.22	□□□□□ -1.89
RLM1	YPL089C	TEC1	P18412	486 aa		3.22	□□□□□ -1.89
RLM1	YPL089C	PKC1	P24583	1151 aa		3.22	□□□□□ -1.89
RLM1	YPL089C	MRPL16	P38064	232 aa		3.22	□□□□□ -1.89
RLM1	YPL089C	ATG20	Q07528	640 aa		3.22	□□□□□ -1.89
RLM1	YPL089C	STB3	Q12427	513 aa		3.21	□□□□□ -1.9
RLM1	YPL089C	AI3	P03877	415 aa		3.2	□□□□□ -1.9
RLM1	YPL089C	YBL036C	P38197	257 aa		3.2	□□□□□ -1.9
RLM1	YPL089C	BRE4	Q07660	1125 aa		3.2	□□□□□ -1.9
RLM1	YPL089C	WTM2	Q12206	467 aa		3.2	□□□□□ -1.9
RLM1	YPL089C	ALG14	P38242	237 aa		3.19	□□□□□ -1.9
RLM1	YPL089C	ALA1	P40825	983 aa	Known RBP	3.19	□□□□□ -1.9
RLM1	YPL089C	YPR084W	Q06821	456 aa		3.19	□□□□□ -1.9
RLM1	YPL089C	FRA1	Q07825	749 aa		3.19	□□□□□ -1.9
RLM1	YPL089C	SAC7	P17121	654 aa		3.19	□□□□□ -1.9
RLM1	YPL089C	SPT5	P27692	1063 aa	Known RBP	3.19	□□□□□ -1.9
RLM1	YPL089C	RNQ1	P25367	405 aa		3.18	□□□□□ -1.9
RLM1	YPL089C	CTH1	P47976	325 aa		3.18	□□□□□ -1.9
RLM1	YPL089C	DAT1	P13483	248 aa	Known RBP	3.17	□□□□□ -1.9
RLM1	YPL089C	GUT2	P32191	649 aa		3.17	□□□□□ -1.9
RLM1	YPL089C	HGH1	P48362	394 aa	Known RBP	3.17	□□□□□ -1.9
RLM1	YPL089C	ARI1	P53111	347 aa	Known RBP	3.17	□□□□□ -1.9
RLM1	YPL089C	RPP1A	P05318	106 aa	Predicted RBP	3.17	□□□□□ -1.9
RLM1	YPL089C	SUP45	P12385	437 aa	Known RBP	3.17	□□□□□ -1.9
RLM1	YPL089C	YDJ1	P25491	409 aa	Known RBP	3.17	□□□□□ -1.9
RLM1	YPL089C	BIO2	P32451	375 aa		3.17	□□□□□ -1.9
RLM1	YPL089C	IRE1	P32361	1115 aa		3.16	□□□□□ -1.9
RLM1	YPL089C	PGM2	P37012	569 aa	Known RBP	3.16	□□□□□ -1.9
RLM1	YPL089C	DMA2	P53924	522 aa		3.16	□□□□□ -1.9
RLM1	YPL089C	YJL007C	P47080	104 aa		3.15	□□□□□ -1.9
RLM1	YPL089C	STE20	Q03497	939 aa	Known RBP	3.15	□□□□□ -1.9
RLM1	YPL089C	MCM16	Q12262	181 aa		3.15	□□□□□ -1.9
RLM1	YPL089C	YLR122C	Q12312	125 aa		3.15	□□□□□ -1.9
RLM1	YPL089C	BIM1	P40013	344 aa		3.15	□□□□□ -1.91
RLM1	YPL089C	YNL108C	P53929	270 aa		3.15	□□□□□ -1.91
RLM1	YPL089C	TBS1	P38114	1094 aa		3.14	□□□□□ -1.91
RLM1	YPL089C	EMP47	P43555	445 aa		3.14	□□□□□ -1.91
RLM1	YPL089C	JJJ2	P46997	583 aa		3.14	□□□□□ -1.91
RLM1	YPL089C	MRX12	P47084	519 aa		3.14	□□□□□ -1.91
RLM1	YPL089C	ISF1	P32488	338 aa		3.14	□□□□□ -1.91
RLM1	YPL089C	ATG32	P40458	529 aa		3.14	□□□□□ -1.91
RLM1	YPL089C	APL6	P46682	809 aa		3.14	□□□□□ -1.91
RLM1	YPL089C	ENO2	P00925	437 aa	Known RBP	3.13	□□□□□ -1.91
RLM1	YPL089C	YPP1	P46951	817 aa		3.13	□□□□□ -1.91
RLM1	YPL089C	GAS5	Q08193	484 aa		3.13	□□□□□ -1.91
RLM1	YPL089C	UTR2	P32623	467 aa		3.12	□□□□□ -1.91
RLM1	YPL089C	UTP7	P40055	554 aa	Known RBP	3.12	□□□□□ -1.91
RLM1	YPL089C	SPR3	P41901	512 aa		3.12	□□□□□ -1.91
RLM1	YPL089C	TIF1	P10081	395 aa	Known RBP	3.12	□□□□□ -1.91
RLM1	YPL089C	RIM21	P48565	533 aa		3.12	□□□□□ -1.91
RLM1	YPL089C	MAG2	Q06436	670 aa	Known RBP	3.12	□□□□□ -1.91
RLM1	YPL089C	ESC8	Q08119	714 aa		3.12	□□□□□ -1.91
RLM1	YPL089C	PDC6	P26263	563 aa	Known RBP	3.11	□□□□□ -1.91
RLM1	YPL089C	SFA1	P32771	386 aa		3.11	□□□□□ -1.91
RLM1	YPL089C	YGR130C	P53278	816 aa		3.11	□□□□□ -1.91
RLM1	YPL089C	UTP13	Q05946	817 aa	Known RBP	3.11	□□□□□ -1.91
RLM1	YPL089C	PSH1	Q12161	406 aa		3.11	□□□□□ -1.91
RLM1	YPL089C	RRM3	P38766	723 aa		3.1	□□□□□ -1.91
RLM1	YPL089C	MRX10	Q05648	414 aa		3.1	□□□□□ -1.91
RLM1	YPL089C	RTG2	P32608	588 aa	Known RBP	3.1	□□□□□ -1.91
RLM1	YPL089C	ATG3	P40344	310 aa		3.1	□□□□□ -1.91
RLM1	YPL089C	NIT1	P40447	199 aa		3.1	□□□□□ -1.91
RLM1	YPL089C	RPL34B	P40525	121 aa	Known RBP	3.1	□□□□□ -1.91
RLM1	YPL089C	SPT2	P06843	333 aa	Predicted RBP	3.09	□□□□□ -1.91
RLM1	YPL089C	CHS2	P14180	963 aa		3.09	□□□□□ -1.91
RLM1	YPL089C	RDS2	P19541	446 aa	Known RBP	3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms