RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W DAK2P43550 591 aa3.17□□□□□ -1.9
VPS16YPL045W YNL035CP53962 389 aaKnown RBP3.17□□□□□ -1.9
VPS16YPL045W BUD20Q08004 166 aaPredicted RBP3.17□□□□□ -1.9
VPS16YPL045W IOC2Q12072 812 aa3.17□□□□□ -1.9
VPS16YPL045W UBP1P25037 809 aa3.16□□□□□ -1.9
VPS16YPL045W SRP40P32583 406 aaPredicted RBP3.16□□□□□ -1.9
VPS16YPL045W SPR3P41901 512 aa3.16□□□□□ -1.9
VPS16YPL045W VNX1P42839 908 aa3.16□□□□□ -1.9
VPS16YPL045W HXT10P43581 546 aa3.16□□□□□ -1.9
VPS16YPL045W IOC3P43596 787 aa3.16□□□□□ -1.9
VPS16YPL045W VPS16Q03308 798 aa3.16□□□□□ -1.9
VPS16YPL045W PIN2Q12057 282 aa3.16□□□□□ -1.9
VPS16YPL045W NGR1P32831 672 aaKnown RBP3.16□□□□□ -1.9
VPS16YPL045W YBR197CP38306 217 aa3.16□□□□□ -1.9
VPS16YPL045W TIF11P38912 153 aaKnown RBP3.16□□□□□ -1.9
VPS16YPL045W MAD1P40957 749 aa3.16□□□□□ -1.9
VPS16YPL045W KXD1P53158 218 aa3.16□□□□□ -1.9
VPS16YPL045W TOP1P04786 769 aa3.15□□□□□ -1.9
VPS16YPL045W SPT2P06843 333 aaPredicted RBP3.15□□□□□ -1.9
VPS16YPL045W PPG1P32838 368 aa3.15□□□□□ -1.9
VPS16YPL045W CWH41P53008 833 aa3.15□□□□□ -1.9
VPS16YPL045W HAP5Q02516 242 aa3.15□□□□□ -1.9
VPS16YPL045W ATG20Q07528 640 aa3.15□□□□□ -1.9
VPS16YPL045W CYT1P07143 309 aa3.15□□□□□ -1.91
VPS16YPL045W CIT2P08679 460 aa3.15□□□□□ -1.91
VPS16YPL045W RRN7P40992 514 aa3.15□□□□□ -1.91
VPS16YPL045W ATG36P46983 293 aa3.15□□□□□ -1.91
VPS16YPL045W SSF2Q12153 453 aaPredicted RBP3.15□□□□□ -1.91
VPS16YPL045W APC11Q12157 165 aa3.15□□□□□ -1.91
VPS16YPL045W AIR2Q12476 344 aaKnown RBP3.15□□□□□ -1.91
VPS16YPL045W SEC61P32915 480 aa3.14□□□□□ -1.91
VPS16YPL045W RMD1Q03441 430 aa3.14□□□□□ -1.91
VPS16YPL045W CAB1Q04430 367 aa3.14□□□□□ -1.91
VPS16YPL045W SWI5P08153 709 aa3.14□□□□□ -1.91
VPS16YPL045W RPS6AP0CX37 236 aaKnown RBP3.14□□□□□ -1.91
VPS16YPL045W RPS6BP0CX38 236 aaPredicted RBP3.14□□□□□ -1.91
VPS16YPL045W RPB10P22139 70 aa3.14□□□□□ -1.91
VPS16YPL045W TPD3P31383 635 aa3.14□□□□□ -1.91
VPS16YPL045W ISC10P32645 267 aa3.14□□□□□ -1.91
VPS16YPL045W YKL091CP33324 310 aaKnown RBP3.14□□□□□ -1.91
VPS16YPL045W RPS26AP39938 119 aaKnown RBP3.14□□□□□ -1.91
VPS16YPL045W RPS26BP39939 119 aaKnown RBP3.14□□□□□ -1.91
VPS16YPL045W UFD2P54860 961 aa3.14□□□□□ -1.91
VPS16YPL045W WRS1Q12109 432 aaKnown RBP3.14□□□□□ -1.91
VPS16YPL045W CLN2P20438 545 aa3.13□□□□□ -1.91
VPS16YPL045W GCD6P32501 712 aaKnown RBP3.13□□□□□ -1.91
VPS16YPL045W RTG1P32607 177 aa3.13□□□□□ -1.91
VPS16YPL045W RRD1P40454 393 aaKnown RBP3.13□□□□□ -1.91
VPS16YPL045W ELP4Q02884 456 aaKnown RBP3.13□□□□□ -1.91
VPS16YPL045W SPP1Q03012 353 aa3.13□□□□□ -1.91
VPS16YPL045W RPN4Q03465 531 aa3.13□□□□□ -1.91
VPS16YPL045W PRT1P06103 763 aaKnown RBP3.12□□□□□ -1.91
VPS16YPL045W PEP7P32609 515 aa3.12□□□□□ -1.91
VPS16YPL045W KTR2P33550 425 aa3.12□□□□□ -1.91
VPS16YPL045W RTT106P40161 455 aa3.12□□□□□ -1.91
VPS16YPL045W OSW7P43611 510 aa3.12□□□□□ -1.91
VPS16YPL045W YJL049WP47048 450 aa3.12□□□□□ -1.91
VPS16YPL045W ALG12P53730 551 aa3.12□□□□□ -1.91
VPS16YPL045W FOX2Q02207 900 aaKnown RBP3.12□□□□□ -1.91
VPS16YPL045W NSE3Q05541 303 aa3.12□□□□□ -1.91
VPS16YPL045W MOD5P07884 428 aa3.12□□□□□ -1.91
VPS16YPL045W CYC8P14922 966 aa3.12□□□□□ -1.91
VPS16YPL045W VPS35P34110 944 aa3.12□□□□□ -1.91
VPS16YPL045W RRP14P36080 434 aaKnown RBP3.12□□□□□ -1.91
VPS16YPL045W FPR3P38911 411 aaKnown RBP3.12□□□□□ -1.91
VPS16YPL045W BUD6P41697 788 aa3.12□□□□□ -1.91
VPS16YPL045W ARH1P48360 493 aa3.12□□□□□ -1.91
VPS16YPL045W MTO1P53070 669 aa3.12□□□□□ -1.91
VPS16YPL045W YGR122WP53272 402 aa3.12□□□□□ -1.91
VPS16YPL045W YNL011CP53980 444 aa3.12□□□□□ -1.91
VPS16YPL045W YDR344CQ05510 147 aa3.12□□□□□ -1.91
VPS16YPL045W YDL129WQ07555 291 aa3.12□□□□□ -1.91
VPS16YPL045W STI1P15705 589 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
VPS16YPL045W PAT1P25644 796 aaKnown RBP3.11□□□□□ -1.91
VPS16YPL045W CDC55Q00362 526 aa3.11□□□□□ -1.91
VPS16YPL045W ESF1Q06344 628 aaKnown RBP3.11□□□□□ -1.91
VPS16YPL045W LDB19Q12502 818 aa3.11□□□□□ -1.91
VPS16YPL045W PET112P33893 541 aa3.11□□□□□ -1.91
VPS16YPL045W YJR008WP47085 338 aa3.11□□□□□ -1.91
VPS16YPL045W SUT1P53032 299 aaKnown RBP3.11□□□□□ -1.91
VPS16YPL045W BNI4P53858 892 aa3.11□□□□□ -1.91
VPS16YPL045W TOS4Q06266 489 aa3.11□□□□□ -1.91
VPS16YPL045W BDS1Q08347 646 aa3.11□□□□□ -1.91
VPS16YPL045W CDC53Q12018 815 aaKnown RBP3.11□□□□□ -1.91
VPS16YPL045W YPR015CQ12531 247 aa3.11□□□□□ -1.91
VPS16YPL045W MNR2P35724 969 aa3.1□□□□□ -1.91
VPS16YPL045W TFG1P41895 735 aaPredicted RBP3.1□□□□□ -1.91
VPS16YPL045W ISU1Q03020 165 aa3.1□□□□□ -1.91
VPS16YPL045W BDF2Q07442 638 aa3.1□□□□□ -1.91
VPS16YPL045W RAD2P07276 1031 aa3.1□□□□□ -1.91
VPS16YPL045W TSR4P25040 408 aa3.1□□□□□ -1.91
VPS16YPL045W SPT16P32558 1035 aaKnown RBP3.1□□□□□ -1.91
VPS16YPL045W HXT5P38695 592 aa3.1□□□□□ -1.91
VPS16YPL045W TAT2P38967 592 aa3.1□□□□□ -1.91
VPS16YPL045W SAM37P50110 327 aa3.1□□□□□ -1.91
VPS16YPL045W RTS3P53289 263 aa3.1□□□□□ -1.91
VPS16YPL045W APP1P53933 587 aa3.1□□□□□ -1.91
VPS16YPL045W OXR1Q08952 273 aa3.1□□□□□ -1.91
VPS16YPL045W NCR1Q12200 1170 aa3.1□□□□□ -1.91
VPS16YPL045W MRPL33P20084 86 aa3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 478.9 ms