RNA–Protein interactions for RNA: YPL039W

YPL039W, Transcript of Putative protein of unknown function, yeast

Gene YPL039W, Length 951 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL039W	YPL039W	EMP47	P43555	445 aa		4.74	□□□□□ -1.65
YPL039W	YPL039W	YPP1	P46951	817 aa		4.74	□□□□□ -1.65
YPL039W	YPL039W	NSG2	P53898	299 aa		4.74	□□□□□ -1.65
YPL039W	YPL039W	DFG5	Q05031	458 aa		4.74	□□□□□ -1.65
YPL039W	YPL039W	HIR3	P47171	1648 aa		4.74	□□□□□ -1.65
YPL039W	YPL039W	RPA190	P10964	1664 aa	Known RBP	4.73	□□□□□ -1.65
YPL039W	YPL039W	MET5	P47169	1442 aa		4.73	□□□□□ -1.65
YPL039W	YPL039W	PEP12	P32854	288 aa		4.73	□□□□□ -1.65
YPL039W	YPL039W	MKS1	P34072	584 aa		4.73	□□□□□ -1.65
YPL039W	YPL039W	TTI1	P36097	1038 aa		4.73	□□□□□ -1.65
YPL039W	YPL039W	RPL34B	P40525	121 aa	Known RBP	4.73	□□□□□ -1.65
YPL039W	YPL039W	MRX12	P47084	519 aa		4.73	□□□□□ -1.65
YPL039W	YPL039W	STE20	Q03497	939 aa	Known RBP	4.73	□□□□□ -1.65
YPL039W	YPL039W	THI72	Q08579	599 aa		4.73	□□□□□ -1.65
YPL039W	YPL039W	CDC25	P04821	1589 aa		4.72	□□□□□ -1.65
YPL039W	YPL039W	MMS1	Q06211	1407 aa		4.72	□□□□□ -1.65
YPL039W	YPL039W	BDS1	Q08347	646 aa		4.71	□□□□□ -1.66
YPL039W	YPL039W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
YPL039W	YPL039W	UTP13	Q05946	817 aa	Known RBP	4.7	□□□□□ -1.66
YPL039W	YPL039W	YCF1	P39109	1515 aa	Known RBP	4.7	□□□□□ -1.66
YPL039W	YPL039W	HAL5	P38970	855 aa	Known RBP	4.69	□□□□□ -1.66
YPL039W	YPL039W	YFL066C	P43538	392 aa		4.69	□□□□□ -1.66
YPL039W	YPL039W	NAM8	Q00539	523 aa	Known RBP	4.69	□□□□□ -1.66
YPL039W	YPL039W	CDC19	P00549	500 aa	Known RBP	4.68	□□□□□ -1.66
YPL039W	YPL039W	TAF2	P23255	1407 aa		4.68	□□□□□ -1.66
YPL039W	YPL039W	AI1	P03875	834 aa		4.67	□□□□□ -1.66
YPL039W	YPL039W	SIS2	P36024	562 aa		4.67	□□□□□ -1.66
YPL039W	YPL039W	SOH1	P38633	127 aa		4.67	□□□□□ -1.66
YPL039W	YPL039W	CCT8	P47079	568 aa	Known RBP	4.67	□□□□□ -1.66
YPL039W	YPL039W	SBP1	P10080	294 aa	Known RBP	4.66	□□□□□ -1.66
YPL039W	YPL039W	CPS1	P27614	576 aa		4.66	□□□□□ -1.66
YPL039W	YPL039W	GEA2	P39993	1459 aa	Known RBP	4.65	□□□□□ -1.66
YPL039W	YPL039W	SPT2	P06843	333 aa	Predicted RBP	4.65	□□□□□ -1.67
YPL039W	YPL039W	STE6	P12866	1290 aa		4.65	□□□□□ -1.67
YPL039W	YPL039W	FBP26	P32604	452 aa		4.65	□□□□□ -1.67
YPL039W	YPL039W	ATG3	P40344	310 aa		4.65	□□□□□ -1.67
YPL039W	YPL039W	VTC4	P47075	721 aa		4.65	□□□□□ -1.67
YPL039W	YPL039W	ISR1	Q06098	443 aa	Known RBP	4.65	□□□□□ -1.67
YPL039W	YPL039W	ATG20	Q07528	640 aa		4.65	□□□□□ -1.67
YPL039W	YPL039W	RPO31	P04051	1460 aa		4.64	□□□□□ -1.67
YPL039W	YPL039W	PUP1	P25043	261 aa		4.64	□□□□□ -1.67
YPL039W	YPL039W	CEM1	P39525	442 aa		4.64	□□□□□ -1.67
YPL039W	YPL039W	CUZ1	P53899	274 aa		4.64	□□□□□ -1.67
YPL039W	YPL039W	ISU1	Q03020	165 aa		4.64	□□□□□ -1.67
YPL039W	YPL039W	SUB2	Q07478	446 aa	Known RBP	4.64	□□□□□ -1.67
YPL039W	YPL039W	SPT6	P23615	1451 aa	Known RBP	4.63	□□□□□ -1.67
YPL039W	YPL039W	TGL4	P36165	910 aa		4.63	□□□□□ -1.67
YPL039W	YPL039W	NOB1	Q08444	459 aa	Known RBP	4.63	□□□□□ -1.67
YPL039W	YPL039W	ESC1	Q03661	1658 aa	Known RBP	4.63	□□□□□ -1.67
YPL039W	YPL039W	SSA4	P22202	642 aa	Known RBP	4.62	□□□□□ -1.67
YPL039W	YPL039W	HSL1	P34244	1518 aa		4.62	□□□□□ -1.67
YPL039W	YPL039W	GAL2	P13181	574 aa		4.61	□□□□□ -1.67
YPL039W	YPL039W	DLD3	P39976	496 aa	Known RBP	4.61	□□□□□ -1.67
YPL039W	YPL039W	YML083C	Q04526	418 aa		4.61	□□□□□ -1.67
YPL039W	YPL039W	HDA3	Q06623	655 aa		4.61	□□□□□ -1.67
YPL039W	YPL039W	YPR053C	Q6Q5F3	151 aa		4.61	□□□□□ -1.67
YPL039W	YPL039W	YOR093C	Q12275	1648 aa		4.61	□□□□□ -1.67
YPL039W	YPL039W	PHO87	P25360	923 aa		4.6	□□□□□ -1.67
YPL039W	YPL039W	SLX8	P40072	274 aa		4.6	□□□□□ -1.67
YPL039W	YPL039W	KTR7	P40504	517 aa		4.6	□□□□□ -1.67
YPL039W	YPL039W	WTM2	Q12206	467 aa		4.6	□□□□□ -1.67
YPL039W	YPL039W	UTR2	P32623	467 aa		4.59	□□□□□ -1.67
YPL039W	YPL039W	ACS2	P52910	683 aa	Known RBP	4.59	□□□□□ -1.67
YPL039W	YPL039W	ADE12	P80210	433 aa	Known RBP	4.59	□□□□□ -1.67
YPL039W	YPL039W	YMR265C	Q03508	461 aa	Known RBP	4.59	□□□□□ -1.67
YPL039W	YPL039W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
YPL039W	YPL039W	DAL1	P32375	460 aa		4.58	□□□□□ -1.68
YPL039W	YPL039W	SKN7	P38889	622 aa		4.58	□□□□□ -1.68
YPL039W	YPL039W	AIM9	P40053	627 aa	Known RBP	4.58	□□□□□ -1.68
YPL039W	YPL039W	ROM1	P53046	1155 aa		4.58	□□□□□ -1.68
YPL039W	YPL039W	TSC13	Q99190	310 aa		4.58	□□□□□ -1.68
YPL039W	YPL039W	RPP2B	P02400	110 aa	Known RBP	4.57	□□□□□ -1.68
YPL039W	YPL039W	SBE2	P42223	864 aa	Known RBP	4.57	□□□□□ -1.68
YPL039W	YPL039W	YMR187C	Q03236	431 aa		4.57	□□□□□ -1.68
YPL039W	YPL039W	YPQ2	Q06328	317 aa		4.57	□□□□□ -1.68
YPL039W	YPL039W	SSK2	P53599	1579 aa		4.57	□□□□□ -1.68
YPL039W	YPL039W	SWI5	P08153	709 aa		4.56	□□□□□ -1.68
YPL039W	YPL039W	RPS6A	P0CX37	236 aa	Known RBP	4.56	□□□□□ -1.68
YPL039W	YPL039W	RPS6B	P0CX38	236 aa	Predicted RBP	4.56	□□□□□ -1.68
YPL039W	YPL039W	HAP4	P14064	554 aa		4.56	□□□□□ -1.68
YPL039W	YPL039W	PDI1	P17967	522 aa	Known RBP	4.56	□□□□□ -1.68
YPL039W	YPL039W	UBP1	P25037	809 aa		4.56	□□□□□ -1.68
YPL039W	YPL039W	KRE33	P53914	1056 aa	Known RBP	4.56	□□□□□ -1.68
YPL039W	YPL039W	ECM23	Q02710	187 aa		4.56	□□□□□ -1.68
YPL039W	YPL039W	TDA6	Q06466	467 aa		4.56	□□□□□ -1.68
YPL039W	YPL039W	GAS4	Q08271	471 aa		4.56	□□□□□ -1.68
YPL039W	YPL039W	DNF2	Q12675	1612 aa		4.56	□□□□□ -1.68
YPL039W	YPL039W	DIT1	P21623	536 aa		4.55	□□□□□ -1.68
YPL039W	YPL039W	YFL034W	P43564	1073 aa		4.55	□□□□□ -1.68
YPL039W	YPL039W	YNR014W	P53719	212 aa		4.55	□□□□□ -1.68
YPL039W	YPL039W	SYT1	Q06836	1226 aa		4.55	□□□□□ -1.68
YPL039W	YPL039W	GLT1	Q12680	2145 aa	Known RBP	4.55	□□□□□ -1.68
YPL039W	YPL039W	SSA1	P10591	642 aa	Known RBP	4.54	□□□□□ -1.68
YPL039W	YPL039W	NTH2	P35172	780 aa		4.54	□□□□□ -1.68
YPL039W	YPL039W	UBP15	P50101	1230 aa		4.54	□□□□□ -1.68
YPL039W	YPL039W	SUV3	P32580	737 aa		4.53	□□□□□ -1.68
YPL039W	YPL039W	TBS1	P38114	1094 aa		4.53	□□□□□ -1.68
YPL039W	YPL039W	UBX7	P38349	436 aa		4.53	□□□□□ -1.68
YPL039W	YPL039W	SSN3	P39073	555 aa		4.53	□□□□□ -1.68
YPL039W	YPL039W	SUM1	P46676	1062 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 34 ms