RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	APC11	Q12157	165 aa		4.65	□□□□□ -1.67
NCR1	YPL006W	ELM1	P32801	640 aa		4.64	□□□□□ -1.67
NCR1	YPL006W	KTR3	P38130	404 aa	Predicted RBP	4.64	□□□□□ -1.67
NCR1	YPL006W	RSM25	P40496	264 aa		4.64	□□□□□ -1.67
NCR1	YPL006W	CST6	P40535	587 aa		4.64	□□□□□ -1.67
NCR1	YPL006W	CWH41	P53008	833 aa		4.64	□□□□□ -1.67
NCR1	YPL006W	ALE1	Q08548	619 aa		4.64	□□□□□ -1.67
NCR1	YPL006W	PRP45	P28004	379 aa	Predicted RBP	4.64	□□□□□ -1.67
NCR1	YPL006W	MPE1	P35728	441 aa	Known RBP	4.64	□□□□□ -1.67
NCR1	YPL006W	NUP133	P36161	1157 aa		4.64	□□□□□ -1.67
NCR1	YPL006W	UBP12	P39538	1254 aa		4.64	□□□□□ -1.67
NCR1	YPL006W	RMD1	Q03441	430 aa		4.63	□□□□□ -1.67
NCR1	YPL006W	PEX19	Q07418	342 aa		4.63	□□□□□ -1.67
NCR1	YPL006W	LPD1	P09624	499 aa	Known RBP	4.63	□□□□□ -1.67
NCR1	YPL006W	ALO1	P54783	526 aa	Known RBP	4.63	□□□□□ -1.67
NCR1	YPL006W	SET1	P38827	1080 aa	Known RBP	4.63	□□□□□ -1.67
NCR1	YPL006W	FPR4	Q06205	392 aa	Predicted RBP	4.63	□□□□□ -1.67
NCR1	YPL006W	NOP58	Q12499	511 aa	Known RBP	4.63	□□□□□ -1.67
NCR1	YPL006W	YRF1-3	P0CX14	1859 aa		4.62	□□□□□ -1.67
NCR1	YPL006W	YRF1-7	P0CX15	1859 aa		4.62	□□□□□ -1.67
NCR1	YPL006W	YRF1-6	P53819	1859 aa		4.62	□□□□□ -1.67
NCR1	YPL006W	RPL19A	P0CX82	189 aa	Known RBP	4.62	□□□□□ -1.67
NCR1	YPL006W	RPL19B	P0CX83	189 aa	Predicted RBP	4.62	□□□□□ -1.67
NCR1	YPL006W	FRS2	P15625	503 aa	Known RBP	4.62	□□□□□ -1.67
NCR1	YPL006W	DID4	P36108	232 aa		4.62	□□□□□ -1.67
NCR1	YPL006W	HXT10	P43581	546 aa		4.62	□□□□□ -1.67
NCR1	YPL006W	YGL242C	P53066	181 aa		4.62	□□□□□ -1.67
NCR1	YPL006W	SSL2	Q00578	843 aa		4.62	□□□□□ -1.67
NCR1	YPL006W	BRE1	Q07457	700 aa	Known RBP	4.62	□□□□□ -1.67
NCR1	YPL006W	TCB1	Q12466	1186 aa		4.62	□□□□□ -1.67
NCR1	YPL006W	PDR18	P53756	1333 aa		4.62	□□□□□ -1.67
NCR1	YPL006W	LEO1	P38439	464 aa		4.62	□□□□□ -1.67
NCR1	YPL006W	KRI1	P42846	591 aa	Known RBP	4.62	□□□□□ -1.67
NCR1	YPL006W	PIB2	P53191	635 aa		4.62	□□□□□ -1.67
NCR1	YPL006W	SSF1	P38789	453 aa	Predicted RBP	4.62	□□□□□ -1.67
NCR1	YPL006W	OSM1	P21375	501 aa	Known RBP	4.61	□□□□□ -1.67
NCR1	YPL006W	MIC60	P36112	540 aa		4.61	□□□□□ -1.67
NCR1	YPL006W	PTP3	P40048	928 aa		4.61	□□□□□ -1.67
NCR1	YPL006W	CCT5	P40413	562 aa	Known RBP	4.61	□□□□□ -1.67
NCR1	YPL006W	RSF2	P46974	1380 aa		4.61	□□□□□ -1.67
NCR1	YPL006W	NCB2	Q92317	146 aa		4.61	□□□□□ -1.67
NCR1	YPL006W	PRX1	P34227	261 aa	Known RBP	4.61	□□□□□ -1.67
NCR1	YPL006W	MRPL10	P36520	322 aa		4.61	□□□□□ -1.67
NCR1	YPL006W	ADE16	P54113	591 aa	Known RBP	4.61	□□□□□ -1.67
NCR1	YPL006W	MEC3	Q02574	474 aa		4.61	□□□□□ -1.67
NCR1	YPL006W	KTR1	P27810	393 aa	Known RBP	4.6	□□□□□ -1.67
NCR1	YPL006W	MIF2	P35201	549 aa		4.6	□□□□□ -1.67
NCR1	YPL006W	MLC1	P53141	149 aa		4.6	□□□□□ -1.67
NCR1	YPL006W	NPR3	P38742	1146 aa		4.6	□□□□□ -1.67
NCR1	YPL006W	SPO22	P40511	975 aa		4.6	□□□□□ -1.67
NCR1	YPL006W	CTF18	P49956	741 aa		4.6	□□□□□ -1.67
NCR1	YPL006W	YPR204W	Q08995	1032 aa		4.6	□□□□□ -1.67
NCR1	YPL006W	YPL150W	Q12152	901 aa		4.6	□□□□□ -1.67
NCR1	YPL006W	CPA2	P03965	1118 aa	Known RBP	4.59	□□□□□ -1.67
NCR1	YPL006W	EPS1	P40557	701 aa		4.59	□□□□□ -1.67
NCR1	YPL006W	TSR3	Q12094	313 aa	Known RBP	4.59	□□□□□ -1.67
NCR1	YPL006W	DDP1	Q99321	188 aa	Known RBP	4.59	□□□□□ -1.67
NCR1	YPL006W	TAF13	P11747	167 aa		4.59	□□□□□ -1.67
NCR1	YPL006W	STU2	P46675	888 aa		4.59	□□□□□ -1.67
NCR1	YPL006W	CYC8	P14922	966 aa		4.59	□□□□□ -1.68
NCR1	YPL006W	ATE1	P16639	503 aa		4.59	□□□□□ -1.68
NCR1	YPL006W	APL2	P36000	726 aa	Predicted RBP	4.59	□□□□□ -1.68
NCR1	YPL006W	RPN1	P38764	993 aa	Known RBP	4.59	□□□□□ -1.68
NCR1	YPL006W	TRS33	Q99394	268 aa		4.59	□□□□□ -1.68
NCR1	YPL006W	ARG8	P18544	423 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	RDS1	P25611	832 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	PBY1	P38254	753 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	ECM23	Q02710	187 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	SLA1	P32790	1244 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	TIM50	Q02776	476 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	YLR271W	Q06152	274 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	ESC2	Q06340	456 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	ELG1	Q12050	791 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	TTI1	P36097	1038 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	TPM2	P40414	161 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	HOS3	Q02959	697 aa	Known RBP	4.58	□□□□□ -1.68
NCR1	YPL006W	VPS64	Q03944	604 aa		4.58	□□□□□ -1.68
NCR1	YPL006W	UTP10	P42945	1769 aa	Known RBP	4.57	□□□□□ -1.68
NCR1	YPL006W	DCD1	P06773	312 aa		4.57	□□□□□ -1.68
NCR1	YPL006W	MAL33	P38157	468 aa		4.57	□□□□□ -1.68
NCR1	YPL006W	PEX14	P53112	341 aa		4.57	□□□□□ -1.68
NCR1	YPL006W	AI2	P03876	854 aa		4.57	□□□□□ -1.68
NCR1	YPL006W	VID28	P40547	921 aa		4.57	□□□□□ -1.68
NCR1	YPL006W	RMT2	Q03305	412 aa		4.57	□□□□□ -1.68
NCR1	YPL006W	ETT1	Q08421	412 aa	Known RBP	4.57	□□□□□ -1.68
NCR1	YPL006W	TUM1	Q08686	304 aa	Known RBP	4.57	□□□□□ -1.68
NCR1	YPL006W	PGA3	Q12746	312 aa	Known RBP	4.57	□□□□□ -1.68
NCR1	YPL006W	SSK22	P25390	1331 aa	Predicted RBP	4.57	□□□□□ -1.68
NCR1	YPL006W	FCP1	Q03254	732 aa		4.56	□□□□□ -1.68
NCR1	YPL006W	PSK2	Q08217	1101 aa		4.56	□□□□□ -1.68
NCR1	YPL006W	GYP5	Q12344	894 aa		4.56	□□□□□ -1.68
NCR1	YPL006W	MTC5	Q03897	1148 aa		4.56	□□□□□ -1.68
NCR1	YPL006W	YLR407W	Q06070	228 aa		4.56	□□□□□ -1.68
NCR1	YPL006W	NOP53	Q12080	455 aa	Known RBP	4.56	□□□□□ -1.68
NCR1	YPL006W	GPA1	P08539	472 aa		4.56	□□□□□ -1.68
NCR1	YPL006W	MATALPHA2	P0CY08	210 aa		4.56	□□□□□ -1.68
NCR1	YPL006W	HMLALPHA2	P0CY09	210 aa		4.56	□□□□□ -1.68
NCR1	YPL006W	YHL017W	P38745	532 aa		4.56	□□□□□ -1.68
NCR1	YPL006W	CIC1	P38779	376 aa	Known RBP	4.56	□□□□□ -1.68
NCR1	YPL006W	STM1	P39015	273 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms