RNA–Protein interactions for RNA: YOR269W

PAC1, Transcript of Involved in nuclear migration, part of the dynein/dynactin pathway, yeast

Gene PAC1, Length 1,485 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAC1	YOR269W	ISR1	Q06098	443 aa	Known RBP	4.68	□□□□□ -1.66
PAC1	YOR269W	SSA2	P10592	639 aa	Known RBP	4.67	□□□□□ -1.66
PAC1	YOR269W	TBS1	P38114	1094 aa		4.67	□□□□□ -1.66
PAC1	YOR269W	LSB6	P42951	607 aa		4.66	□□□□□ -1.66
PAC1	YOR269W	SLN1	P39928	1220 aa	Predicted RBP	4.65	□□□□□ -1.66
PAC1	YOR269W	ALA1	P40825	983 aa	Known RBP	4.65	□□□□□ -1.66
PAC1	YOR269W	IRE1	P32361	1115 aa		4.64	□□□□□ -1.67
PAC1	YOR269W	TAT1	P38085	619 aa		4.64	□□□□□ -1.67
PAC1	YOR269W	UTP7	P40055	554 aa	Known RBP	4.64	□□□□□ -1.67
PAC1	YOR269W	SUM1	P46676	1062 aa		4.64	□□□□□ -1.67
PAC1	YOR269W	KNS1	P32350	737 aa	Predicted RBP	4.63	□□□□□ -1.67
PAC1	YOR269W	APL6	P46682	809 aa		4.63	□□□□□ -1.67
PAC1	YOR269W	JJJ2	P46997	583 aa		4.63	□□□□□ -1.67
PAC1	YOR269W	EMP47	P43555	445 aa		4.62	□□□□□ -1.67
PAC1	YOR269W	MCA1	Q08601	432 aa		4.62	□□□□□ -1.67
PAC1	YOR269W	PDC5	P16467	563 aa	Known RBP	4.62	□□□□□ -1.67
PAC1	YOR269W	MAC1	P35192	417 aa		4.62	□□□□□ -1.67
PAC1	YOR269W	CSE4	P36012	229 aa		4.62	□□□□□ -1.67
PAC1	YOR269W	MRPL16	P38064	232 aa		4.62	□□□□□ -1.67
PAC1	YOR269W	GLT1	Q12680	2145 aa	Known RBP	4.61	□□□□□ -1.67
PAC1	YOR269W	MCM16	Q12262	181 aa		4.6	□□□□□ -1.67
PAC1	YOR269W	SPT5	P27692	1063 aa	Known RBP	4.59	□□□□□ -1.67
PAC1	YOR269W	ISF1	P32488	338 aa		4.59	□□□□□ -1.67
PAC1	YOR269W	SHM1	P37292	490 aa	Predicted RBP	4.59	□□□□□ -1.67
PAC1	YOR269W	HAL5	P38970	855 aa	Known RBP	4.59	□□□□□ -1.67
PAC1	YOR269W	SLX8	P40072	274 aa		4.59	□□□□□ -1.67
PAC1	YOR269W	PSH1	Q12161	406 aa		4.59	□□□□□ -1.67
PAC1	YOR269W	STB3	Q12427	513 aa		4.59	□□□□□ -1.67
PAC1	YOR269W	PDC6	P26263	563 aa	Known RBP	4.58	□□□□□ -1.68
PAC1	YOR269W	SPR3	P41901	512 aa		4.57	□□□□□ -1.68
PAC1	YOR269W	YPL034W	Q03083	165 aa		4.57	□□□□□ -1.68
PAC1	YOR269W	TY1A-DR2	Q03964	440 aa	Known RBP	4.57	□□□□□ -1.68
PAC1	YOR269W	PRY1	P47032	299 aa		4.56	□□□□□ -1.68
PAC1	YOR269W	UTP13	Q05946	817 aa	Known RBP	4.56	□□□□□ -1.68
PAC1	YOR269W	RPP1A	P05318	106 aa	Predicted RBP	4.56	□□□□□ -1.68
PAC1	YOR269W	ATG3	P40344	310 aa		4.56	□□□□□ -1.68
PAC1	YOR269W	IRC24	P40580	263 aa		4.56	□□□□□ -1.68
PAC1	YOR269W	HDA3	Q06623	655 aa		4.56	□□□□□ -1.68
PAC1	YOR269W	RPS31	P05759	152 aa	Known RBP	4.54	□□□□□ -1.68
PAC1	YOR269W	SOH1	P38633	127 aa		4.54	□□□□□ -1.68
PAC1	YOR269W	ALO1	P54783	526 aa	Known RBP	4.54	□□□□□ -1.68
PAC1	YOR269W	TPS3	P38426	1054 aa	Known RBP	4.53	□□□□□ -1.68
PAC1	YOR269W	LEU1	P07264	779 aa	Known RBP	4.52	□□□□□ -1.69
PAC1	YOR269W	KIN1	P13185	1064 aa		4.52	□□□□□ -1.69
PAC1	YOR269W	OMA1	P36163	345 aa		4.52	□□□□□ -1.69
PAC1	YOR269W	HPC2	Q01448	625 aa		4.52	□□□□□ -1.69
PAC1	YOR269W	INP52	P50942	1183 aa		4.51	□□□□□ -1.69
PAC1	YOR269W	YPQ2	Q06328	317 aa		4.51	□□□□□ -1.69
PAC1	YOR269W	YDJ1	P25491	409 aa	Known RBP	4.5	□□□□□ -1.69
PAC1	YOR269W	YBL036C	P38197	257 aa		4.5	□□□□□ -1.69
PAC1	YOR269W	MSC7	P38694	644 aa		4.5	□□□□□ -1.69
PAC1	YOR269W	YPP1	P46951	817 aa		4.5	□□□□□ -1.69
PAC1	YOR269W	TFB3	Q03290	321 aa		4.49	□□□□□ -1.69
PAC1	YOR269W	NHA1	Q99271	985 aa		4.49	□□□□□ -1.69
PAC1	YOR269W	RGP1	P16664	663 aa		4.49	□□□□□ -1.69
PAC1	YOR269W	BUD9	P53226	547 aa		4.49	□□□□□ -1.69
PAC1	YOR269W	SWI5	P08153	709 aa		4.48	□□□□□ -1.69
PAC1	YOR269W	LEU3	P08638	886 aa		4.48	□□□□□ -1.69
PAC1	YOR269W	YTA6	P40328	754 aa		4.48	□□□□□ -1.69
PAC1	YOR269W	ALG14	P38242	237 aa		4.47	□□□□□ -1.69
PAC1	YOR269W	ALD2	P47771	506 aa		4.47	□□□□□ -1.69
PAC1	YOR269W	HEH2	Q03281	663 aa		4.47	□□□□□ -1.69
PAC1	YOR269W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	RIP-Chip
PAC1	YOR269W	PGM2	P37012	569 aa	Known RBP	4.46	□□□□□ -1.7
PAC1	YOR269W	GUA1	P38625	525 aa	Known RBP	4.46	□□□□□ -1.7
PAC1	YOR269W	MCM1	P11746	286 aa		4.45	□□□□□ -1.7
PAC1	YOR269W	AI3	P03877	415 aa		4.43	□□□□□ -1.7
PAC1	YOR269W	AIM9	P40053	627 aa	Known RBP	4.43	□□□□□ -1.7
PAC1	YOR269W	YNL165W	P53891	406 aa		4.43	□□□□□ -1.7
PAC1	YOR269W	RPS6A	P0CX37	236 aa	Known RBP	4.43	□□□□□ -1.7
PAC1	YOR269W	RPS6B	P0CX38	236 aa	Predicted RBP	4.43	□□□□□ -1.7
PAC1	YOR269W	PGM1	P33401	570 aa	Known RBP	4.43	□□□□□ -1.7
PAC1	YOR269W	YFL034W	P43564	1073 aa		4.43	□□□□□ -1.7
PAC1	YOR269W	BRL1	P38770	471 aa		4.42	□□□□□ -1.7
PAC1	YOR269W	PRK1	P40494	810 aa		4.42	□□□□□ -1.7
PAC1	YOR269W	SUP45	P12385	437 aa	Known RBP	4.41	□□□□□ -1.7
PAC1	YOR269W	SAC7	P17121	654 aa		4.41	□□□□□ -1.7
PAC1	YOR269W	MLF3	P32047	452 aa		4.41	□□□□□ -1.7
PAC1	YOR269W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
PAC1	YOR269W	AVT1	P47082	602 aa		4.41	□□□□□ -1.7
PAC1	YOR269W	GIS4	Q04233	774 aa		4.41	□□□□□ -1.7
PAC1	YOR269W	NAR1	P23503	491 aa	Known RBP	4.4	□□□□□ -1.71
PAC1	YOR269W	RPN1	P38764	993 aa	Known RBP	4.4	□□□□□ -1.71
PAC1	YOR269W	ARI1	P53111	347 aa	Known RBP	4.4	□□□□□ -1.71
PAC1	YOR269W	ENO2	P00925	437 aa	Known RBP	4.39	□□□□□ -1.71
PAC1	YOR269W	NTH2	P35172	780 aa		4.39	□□□□□ -1.71
PAC1	YOR269W	MED7	Q08278	222 aa		4.39	□□□□□ -1.71
PAC1	YOR269W	Q0182	Q9ZZW1	134 aa		4.39	□□□□□ -1.71
PAC1	YOR269W	SFA1	P32771	386 aa		4.38	□□□□□ -1.71
PAC1	YOR269W	NCL1	P38205	684 aa	Known RBP	4.38	□□□□□ -1.71
PAC1	YOR269W	RRM3	P38766	723 aa		4.38	□□□□□ -1.71
PAC1	YOR269W	COQ2	P32378	372 aa		4.37	□□□□□ -1.71
PAC1	YOR269W	BIO2	P32451	375 aa		4.37	□□□□□ -1.71
PAC1	YOR269W	SKP1	P52286	194 aa		4.37	□□□□□ -1.71
PAC1	YOR269W	GAS5	Q08193	484 aa		4.37	□□□□□ -1.71
PAC1	YOR269W	KAE1	P36132	386 aa		4.37	□□□□□ -1.71
PAC1	YOR269W	MTO1	P53070	669 aa		4.37	□□□□□ -1.71
PAC1	YOR269W	YNL108C	P53929	270 aa		4.37	□□□□□ -1.71
PAC1	YOR269W	RIM21	P48565	533 aa		4.36	□□□□□ -1.71
PAC1	YOR269W	RDS2	P19541	446 aa	Known RBP	4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms