RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W PDR15Q04182 1529 aaKnown RBP4.31□□□□□ -1.72
ABP140YOR239W GDB1Q06625 1536 aa4.31□□□□□ -1.72
ABP140YOR239W ROM2P51862 1356 aaKnown RBP4.31□□□□□ -1.72
ABP140YOR239W ARO1P08566 1588 aaKnown RBP4.3□□□□□ -1.72
ABP140YOR239W TY4B-PA0A0B7P3V8 1104 aa4.3□□□□□ -1.72
ABP140YOR239W CYC8P14922 966 aa4.3□□□□□ -1.72
ABP140YOR239W IES2P40154 320 aa4.3□□□□□ -1.72
ABP140YOR239W HOS4P40480 1083 aa4.3□□□□□ -1.72
ABP140YOR239W ATH1P48016 1211 aa4.3□□□□□ -1.72
ABP140YOR239W ORC1P54784 914 aaPredicted RBP4.3□□□□□ -1.72
ABP140YOR239W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
ABP140YOR239W SLP1Q12232 587 aa4.3□□□□□ -1.72
ABP140YOR239W RPA190P10964 1664 aaKnown RBP4.3□□□□□ -1.72
ABP140YOR239W SRS2P12954 1174 aa4.3□□□□□ -1.72
ABP140YOR239W HSC82P15108 705 aaKnown RBP4.3□□□□□ -1.72
ABP140YOR239W PHO87P25360 923 aa4.3□□□□□ -1.72
ABP140YOR239W RAD16P31244 790 aa4.3□□□□□ -1.72
ABP140YOR239W DPH5P32469 300 aaPredicted RBP4.3□□□□□ -1.72
ABP140YOR239W OLA1P38219 394 aaKnown RBP4.3□□□□□ -1.72
ABP140YOR239W XDJ1P39102 459 aa4.3□□□□□ -1.72
ABP140YOR239W SEC9P40357 651 aa4.3□□□□□ -1.72
ABP140YOR239W DAN4P47179 1161 aa4.3□□□□□ -1.72
ABP140YOR239W DNM1P54861 757 aa4.3□□□□□ -1.72
ABP140YOR239W MAM3Q12296 706 aa4.3□□□□□ -1.72
ABP140YOR239W NUP145P49687 1317 aa4.29□□□□□ -1.72
ABP140YOR239W VPS15P22219 1454 aa4.29□□□□□ -1.72
ABP140YOR239W CLN1P20437 546 aa4.29□□□□□ -1.72
ABP140YOR239W SEC14P24280 304 aaKnown RBP4.29□□□□□ -1.72
ABP140YOR239W MRC1P25588 1096 aa4.29□□□□□ -1.72
ABP140YOR239W RPN12P32496 274 aa4.29□□□□□ -1.72
ABP140YOR239W PCS60P38137 543 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
ABP140YOR239W GDT1P38301 280 aaPredicted RBP4.29□□□□□ -1.72
ABP140YOR239W NAB3P38996 802 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
ABP140YOR239W KRE33P53914 1056 aaKnown RBP4.29□□□□□ -1.72
ABP140YOR239W ARR1Q06596 294 aa4.29□□□□□ -1.72
ABP140YOR239W MAK21Q12176 1025 aaKnown RBP4.29□□□□□ -1.72
ABP140YOR239W GIN4Q12263 1142 aa4.29□□□□□ -1.72
ABP140YOR239W RKR1Q04781 1562 aa4.29□□□□□ -1.72
ABP140YOR239W RAD50P12753 1312 aa4.29□□□□□ -1.72
ABP140YOR239W KEX1P09620 729 aa4.28□□□□□ -1.72
ABP140YOR239W SUI2P20459 304 aaKnown RBP4.28□□□□□ -1.72
ABP140YOR239W MPE1P35728 441 aaKnown RBP4.28□□□□□ -1.72
ABP140YOR239W RGA1P39083 1007 aa4.28□□□□□ -1.72
ABP140YOR239W SAP1P39955 897 aaKnown RBP4.28□□□□□ -1.72
ABP140YOR239W RRT14P40470 206 aa4.28□□□□□ -1.72
ABP140YOR239W CIR1P42940 261 aa4.28□□□□□ -1.72
ABP140YOR239W NOP7P53261 605 aaKnown RBP4.28□□□□□ -1.72
ABP140YOR239W YNR021WP53723 404 aaKnown RBP4.28□□□□□ -1.72
ABP140YOR239W ARP5P53946 755 aa4.28□□□□□ -1.72
ABP140YOR239W YDL144CQ07589 356 aa4.28□□□□□ -1.72
ABP140YOR239W TY3B-IQ7LHG5 1498 aaKnown RBP4.28□□□□□ -1.72
ABP140YOR239W KEX2P13134 814 aa4.28□□□□□ -1.72
ABP140YOR239W ISW1P38144 1129 aa4.28□□□□□ -1.72
ABP140YOR239W BDH2P39713 417 aa4.28□□□□□ -1.72
ABP140YOR239W SIT1P39980 628 aa4.28□□□□□ -1.72
ABP140YOR239W MPH1P40562 993 aa4.28□□□□□ -1.72
ABP140YOR239W GLE1Q12315 538 aa4.28□□□□□ -1.72
ABP140YOR239W TY3B-GQ99315 1547 aa4.28□□□□□ -1.73
ABP140YOR239W PDI1P17967 522 aaKnown RBP4.27□□□□□ -1.73
ABP140YOR239W DCW1P36091 449 aa4.27□□□□□ -1.73
ABP140YOR239W VRP1P37370 817 aa4.27□□□□□ -1.73
ABP140YOR239W TPS3P38426 1054 aaKnown RBP4.27□□□□□ -1.73
ABP140YOR239W RFC1P38630 861 aaKnown RBP4.27□□□□□ -1.73
ABP140YOR239W RVS167P39743 482 aaKnown RBP4.27□□□□□ -1.73
ABP140YOR239W TLG2Q08144 397 aa4.27□□□□□ -1.73
ABP140YOR239W YKL068W-AQ3E826 78 aa4.27□□□□□ -1.73
ABP140YOR239W DNF2Q12675 1612 aa4.27□□□□□ -1.73
ABP140YOR239W RPO31P04051 1460 aa4.27□□□□□ -1.73
ABP140YOR239W HSP104P31539 908 aaKnown RBP4.26□□□□□ -1.73
ABP140YOR239W GLC3P32775 704 aa4.26□□□□□ -1.73
ABP140YOR239W NUF2P33895 451 aa4.26□□□□□ -1.73
ABP140YOR239W JJJ1P53863 590 aa4.26□□□□□ -1.73
ABP140YOR239W UBX2Q04228 584 aa4.26□□□□□ -1.73
ABP140YOR239W CFT2Q12102 859 aaPredicted RBP4.26□□□□□ -1.73
ABP140YOR239W AUS1Q08409 1394 aa4.26□□□□□ -1.73
ABP140YOR239W IQG1Q12280 1495 aa4.26□□□□□ -1.73
ABP140YOR239W MRPS28P21771 286 aa4.26□□□□□ -1.73
ABP140YOR239W EXO84P38261 753 aa4.26□□□□□ -1.73
ABP140YOR239W TOM71P38825 639 aaKnown RBP4.26□□□□□ -1.73
ABP140YOR239W ARO80Q04052 950 aa4.26□□□□□ -1.73
ABP140YOR239W YMR196WQ04336 1088 aa4.26□□□□□ -1.73
ABP140YOR239W IMH1Q06704 911 aaKnown RBP4.26□□□□□ -1.73
ABP140YOR239W YPL225WQ08971 146 aaKnown RBP4.26□□□□□ -1.73
ABP140YOR239W MPH3P0CE00 602 aa4.25□□□□□ -1.73
ABP140YOR239W BRF1P29056 596 aa4.25□□□□□ -1.73
ABP140YOR239W RSM25P40496 264 aa4.25□□□□□ -1.73
ABP140YOR239W APL6P46682 809 aa4.25□□□□□ -1.73
ABP140YOR239W HST1P53685 503 aa4.25□□□□□ -1.73
ABP140YOR239W DMA2P53924 522 aa4.25□□□□□ -1.73
ABP140YOR239W TIM50Q02776 476 aa4.25□□□□□ -1.73
ABP140YOR239W SPO19Q03029 223 aa4.25□□□□□ -1.73
ABP140YOR239W STE20Q03497 939 aaKnown RBP4.25□□□□□ -1.73
ABP140YOR239W AIM7Q12156 149 aa4.25□□□□□ -1.73
ABP140YOR239W ULS1Q08562 1619 aa4.25□□□□□ -1.73
ABP140YOR239W CAT8P39113 1433 aa4.25□□□□□ -1.73
ABP140YOR239W AI4P03878 556 aa4.24□□□□□ -1.73
ABP140YOR239W DPS1P04802 557 aaKnown RBP4.24□□□□□ -1.73
ABP140YOR239W ARD1P07347 238 aaPredicted RBP4.24□□□□□ -1.73
ABP140YOR239W SWI6P09959 803 aa4.24□□□□□ -1.73
ABP140YOR239W KIN1P13185 1064 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 101.6 ms