RNA–Protein interactions for RNA: YNL093W

YPT53, Transcript of Stress-induced Rab family GTPase, yeast

Gene YPT53, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT53	YNL093W	SBE2	P42223	864 aa	Known RBP	5.24	□□□□□ -1.57
YPT53	YNL093W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
YPT53	YNL093W	YMR265C	Q03508	461 aa	Known RBP	5.23	□□□□□ -1.57
YPT53	YNL093W	SYT1	Q06836	1226 aa		5.23	□□□□□ -1.57
YPT53	YNL093W	FRA1	Q07825	749 aa		5.23	□□□□□ -1.57
YPT53	YNL093W	WTM2	Q12206	467 aa		5.23	□□□□□ -1.57
YPT53	YNL093W	ATG36	P46983	293 aa		5.22	□□□□□ -1.57
YPT53	YNL093W	STE20	Q03497	939 aa	Known RBP	5.22	□□□□□ -1.57
YPT53	YNL093W	DIT1	P21623	536 aa		5.21	□□□□□ -1.58
YPT53	YNL093W	ISF1	P32488	338 aa		5.21	□□□□□ -1.58
YPT53	YNL093W	DLD3	P39976	496 aa	Known RBP	5.21	□□□□□ -1.58
YPT53	YNL093W	CWC22	P53333	577 aa	Known RBP	5.21	□□□□□ -1.58
YPT53	YNL093W	HIF1	Q12373	385 aa		5.21	□□□□□ -1.58
YPT53	YNL093W	MET10	P39692	1035 aa		5.2	□□□□□ -1.58
YPT53	YNL093W	OSW7	P43611	510 aa		5.2	□□□□□ -1.58
YPT53	YNL093W	YJR008W	P47085	338 aa		5.2	□□□□□ -1.58
YPT53	YNL093W	UBP15	P50101	1230 aa		5.2	□□□□□ -1.58
YPT53	YNL093W	KRE33	P53914	1056 aa	Known RBP	5.2	□□□□□ -1.58
YPT53	YNL093W	ADE12	P80210	433 aa	Known RBP	5.2	□□□□□ -1.58
YPT53	YNL093W	TOA1	P32773	286 aa		5.19	□□□□□ -1.58
YPT53	YNL093W	HGH1	P48362	394 aa	Known RBP	5.19	□□□□□ -1.58
YPT53	YNL093W	TPO2	P53283	614 aa		5.19	□□□□□ -1.58
YPT53	YNL093W	NAF1	P53919	492 aa	Known RBP	5.19	□□□□□ -1.58
YPT53	YNL093W	ISR1	Q06098	443 aa	Known RBP	5.19	□□□□□ -1.58
YPT53	YNL093W	TDA6	Q06466	467 aa		5.19	□□□□□ -1.58
YPT53	YNL093W	DAT1	P13483	248 aa	Known RBP	5.18	□□□□□ -1.58
YPT53	YNL093W	EMP47	P43555	445 aa		5.18	□□□□□ -1.58
YPT53	YNL093W	MSN5	P52918	1224 aa		5.18	□□□□□ -1.58
YPT53	YNL093W	FAR11	P53917	953 aa		5.18	□□□□□ -1.58
YPT53	YNL093W	YPR053C	Q6Q5F3	151 aa		5.18	□□□□□ -1.58
YPT53	YNL093W	SKN7	P38889	622 aa		5.17	□□□□□ -1.58
YPT53	YNL093W	HAL5	P38970	855 aa	Known RBP	5.17	□□□□□ -1.58
YPT53	YNL093W	UTP7	P40055	554 aa	Known RBP	5.17	□□□□□ -1.58
YPT53	YNL093W	APL6	P46682	809 aa		5.17	□□□□□ -1.58
YPT53	YNL093W	BUD21	Q08492	214 aa	Predicted RBP	5.17	□□□□□ -1.58
YPT53	YNL093W	YTA7	P40340	1379 aa		5.16	□□□□□ -1.58
YPT53	YNL093W	SPT2	P06843	333 aa	Predicted RBP	5.16	□□□□□ -1.58
YPT53	YNL093W	KIN1	P13185	1064 aa		5.16	□□□□□ -1.58
YPT53	YNL093W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
YPT53	YNL093W	YDR461C-A	Q2V2P7	80 aa		5.16	□□□□□ -1.58
YPT53	YNL093W	SSA2	P10592	639 aa	Known RBP	5.15	□□□□□ -1.59
YPT53	YNL093W	UTR2	P32623	467 aa		5.15	□□□□□ -1.59
YPT53	YNL093W	SPC42	P36094	363 aa		5.15	□□□□□ -1.59
YPT53	YNL093W	SSA1	P10591	642 aa	Known RBP	5.14	□□□□□ -1.59
YPT53	YNL093W	YDJ1	P25491	409 aa	Known RBP	5.14	□□□□□ -1.59
YPT53	YNL093W	GEF1	P37020	779 aa		5.14	□□□□□ -1.59
YPT53	YNL093W	GUA1	P38625	525 aa	Known RBP	5.14	□□□□□ -1.59
YPT53	YNL093W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
YPT53	YNL093W	YMR187C	Q03236	431 aa		5.14	□□□□□ -1.59
YPT53	YNL093W	RPP2B	P02400	110 aa	Known RBP	5.13	□□□□□ -1.59
YPT53	YNL093W	YCK2	P23292	546 aa	Known RBP	5.13	□□□□□ -1.59
YPT53	YNL093W	SHM1	P37292	490 aa	Predicted RBP	5.13	□□□□□ -1.59
YPT53	YNL093W	SSF1	P38789	453 aa	Predicted RBP	5.13	□□□□□ -1.59
YPT53	YNL093W	MCM16	Q12262	181 aa		5.13	□□□□□ -1.59
YPT53	YNL093W	KIP3	P53086	805 aa	Known RBP	5.12	□□□□□ -1.59
YPT53	YNL093W	DOS2	P54858	310 aa		5.12	□□□□□ -1.59
YPT53	YNL093W	SBP1	P10080	294 aa	Known RBP	5.11	□□□□□ -1.59
YPT53	YNL093W	SLD2	P34252	453 aa		5.11	□□□□□ -1.59
YPT53	YNL093W	AHP1	P38013	176 aa	Known RBP	5.11	□□□□□ -1.59
YPT53	YNL093W	RLP24	Q07915	199 aa	Known RBP	5.11	□□□□□ -1.59
YPT53	YNL093W	GPM1	P00950	247 aa	Known RBP	5.1	□□□□□ -1.59
YPT53	YNL093W	SLN1	P39928	1220 aa	Predicted RBP	5.1	□□□□□ -1.59
YPT53	YNL093W	SUM1	P46676	1062 aa		5.1	□□□□□ -1.59
YPT53	YNL093W	MRX12	P47084	519 aa		5.1	□□□□□ -1.59
YPT53	YNL093W	ZDS1	P50111	915 aa	Known RBP	5.1	□□□□□ -1.59
YPT53	YNL093W	YNR014W	P53719	212 aa		5.1	□□□□□ -1.59
YPT53	YNL093W	IRE1	P32361	1115 aa		5.09	□□□□□ -1.59
YPT53	YNL093W	TBS1	P38114	1094 aa		5.09	□□□□□ -1.59
YPT53	YNL093W	MCX1	P38323	520 aa	Predicted RBP	5.09	□□□□□ -1.59
YPT53	YNL093W	ALA1	P40825	983 aa	Known RBP	5.09	□□□□□ -1.59
YPT53	YNL093W	JJJ2	P46997	583 aa		5.09	□□□□□ -1.59
YPT53	YNL093W	MPP10	P47083	593 aa	Known RBP	5.09	□□□□□ -1.59
YPT53	YNL093W	DEF1	P35732	738 aa	Known RBP	5.08	□□□□□ -1.6
YPT53	YNL093W	CSE4	P36012	229 aa		5.08	□□□□□ -1.6
YPT53	YNL093W	PAM1	P37304	830 aa	Known RBP	5.08	□□□□□ -1.6
YPT53	YNL093W	AIM21	P40563	679 aa		5.08	□□□□□ -1.6
YPT53	YNL093W	PSH1	Q12161	406 aa		5.08	□□□□□ -1.6
YPT53	YNL093W	NHA1	Q99271	985 aa		5.08	□□□□□ -1.6
YPT53	YNL093W	RPS31	P05759	152 aa	Known RBP	5.07	□□□□□ -1.6
YPT53	YNL093W	RPS0A	P32905	252 aa	Known RBP	5.07	□□□□□ -1.6
YPT53	YNL093W	SOH1	P38633	127 aa		5.07	□□□□□ -1.6
YPT53	YNL093W	RPT2	P40327	437 aa	Known RBP	5.07	□□□□□ -1.6
YPT53	YNL093W	TY4A-J	P47023	414 aa		5.07	□□□□□ -1.6
YPT53	YNL093W	HDA3	Q06623	655 aa		5.07	□□□□□ -1.6
YPT53	YNL093W	MCA1	Q08601	432 aa		5.07	□□□□□ -1.6
YPT53	YNL093W	YDR215C	Q12240	137 aa		5.07	□□□□□ -1.6
YPT53	YNL093W	FPS1	P23900	669 aa		5.06	□□□□□ -1.6
YPT53	YNL093W	PDC6	P26263	563 aa	Known RBP	5.06	□□□□□ -1.6
YPT53	YNL093W	MRPL16	P38064	232 aa		5.06	□□□□□ -1.6
YPT53	YNL093W	BOI2	P39969	1040 aa		5.06	□□□□□ -1.6
YPT53	YNL093W	ISW1	P38144	1129 aa		5.05	□□□□□ -1.6
YPT53	YNL093W	YBL036C	P38197	257 aa		5.05	□□□□□ -1.6
YPT53	YNL093W	AMN1	P38285	549 aa	Predicted RBP	5.05	□□□□□ -1.6
YPT53	YNL093W	PKC1	P24583	1151 aa		5.04	□□□□□ -1.6
YPT53	YNL093W	RRN6	P32786	894 aa		5.04	□□□□□ -1.6
YPT53	YNL093W	FPR3	P38911	411 aa	Known RBP	5.04	□□□□□ -1.6
YPT53	YNL093W	YAF9	P53930	226 aa		5.04	□□□□□ -1.6
YPT53	YNL093W	SUB2	Q07478	446 aa	Known RBP	5.04	□□□□□ -1.6
YPT53	YNL093W	SPT5	P27692	1063 aa	Known RBP	5.03	□□□□□ -1.6
YPT53	YNL093W	STB3	Q12427	513 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms