RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W SPT5P27692 1063 aaKnown RBP6.12□□□□□ -1.43
DDR48YMR173W TBS1P38114 1094 aa6.12□□□□□ -1.43
DDR48YMR173W GUA1P38625 525 aaKnown RBP6.12□□□□□ -1.43
DDR48YMR173W SUM1P46676 1062 aa6.11□□□□□ -1.43
DDR48YMR173W GPM1P00950 247 aaKnown RBP6.1□□□□□ -1.43
DDR48YMR173W SBP1P10080 294 aaKnown RBP6.1□□□□□ -1.43
DDR48YMR173W YDJ1P25491 409 aaKnown RBP6.1□□□□□ -1.43
DDR48YMR173W JJJ2P46997 583 aa6.1□□□□□ -1.43
DDR48YMR173W IRE1P32361 1115 aa6.09□□□□□ -1.43
DDR48YMR173W MCX1P38323 520 aaPredicted RBP6.09□□□□□ -1.43
DDR48YMR173W SLX8P40072 274 aa6.09□□□□□ -1.43
DDR48YMR173W ALA1P40825 983 aaKnown RBP6.09□□□□□ -1.43
DDR48YMR173W YNR014WP53719 212 aa6.09□□□□□ -1.43
DDR48YMR173W SHM1P37292 490 aaPredicted RBP6.08□□□□□ -1.44
DDR48YMR173W YBL036CP38197 257 aa6.08□□□□□ -1.44
DDR48YMR173W LEU3P08638 886 aa6.07□□□□□ -1.44
DDR48YMR173W YCK2P23292 546 aaKnown RBP6.07□□□□□ -1.44
DDR48YMR173W FPS1P23900 669 aa6.07□□□□□ -1.44
DDR48YMR173W SOH1P38633 127 aa6.06□□□□□ -1.44
DDR48YMR173W HDA3Q06623 655 aa6.06□□□□□ -1.44
DDR48YMR173W UTP13Q05946 817 aaKnown RBP6.05□□□□□ -1.44
DDR48YMR173W PSH1Q12161 406 aa6.05□□□□□ -1.44
DDR48YMR173W MRPL16P38064 232 aa6.04□□□□□ -1.44
DDR48YMR173W BOI2P39969 1040 aa6.04□□□□□ -1.44
DDR48YMR173W HPC2Q01448 625 aa6.04□□□□□ -1.44
DDR48YMR173W PDC6P26263 563 aaKnown RBP6.03□□□□□ -1.44
DDR48YMR173W ATG3P40344 310 aa6.03□□□□□ -1.44
DDR48YMR173W YDR215CQ12240 137 aa6.03□□□□□ -1.44
DDR48YMR173W RPS31P05759 152 aaKnown RBP6.01□□□□□ -1.45
DDR48YMR173W SLN1P39928 1220 aaPredicted RBP6.01□□□□□ -1.45
DDR48YMR173W STB3Q12427 513 aa6.01□□□□□ -1.45
DDR48YMR173W PDC5P16467 563 aaKnown RBP6□□□□□ -1.45
DDR48YMR173W KNS1P32350 737 aaPredicted RBP6□□□□□ -1.45
DDR48YMR173W AMN1P38285 549 aaPredicted RBP6□□□□□ -1.45
DDR48YMR173W YPP1P46951 817 aa6□□□□□ -1.45
DDR48YMR173W BIO2P32451 375 aa5.99□□□□□ -1.45
DDR48YMR173W MET1P36150 593 aa5.99□□□□□ -1.45
DDR48YMR173W BRL1P38770 471 aa5.99□□□□□ -1.45
DDR48YMR173W SPR3P41901 512 aa5.99□□□□□ -1.45
DDR48YMR173W YPQ2Q06328 317 aa5.99□□□□□ -1.45
DDR48YMR173W SUP45P12385 437 aaKnown RBP5.98□□□□□ -1.45
DDR48YMR173W PKC1P24583 1151 aa5.98□□□□□ -1.45
DDR48YMR173W TFB3Q03290 321 aa5.98□□□□□ -1.45
DDR48YMR173W TY1A-DR2Q03964 440 aaKnown RBP5.98□□□□□ -1.45
DDR48YMR173W MCA1Q08601 432 aa5.98□□□□□ -1.45
DDR48YMR173W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
DDR48YMR173W RPN1P38764 993 aaKnown RBP5.97□□□□□ -1.45
DDR48YMR173W ENO2P00925 437 aaKnown RBP5.96□□□□□ -1.46
DDR48YMR173W SWI5P08153 709 aa5.96□□□□□ -1.46
DDR48YMR173W LEU1P07264 779 aaKnown RBP5.95□□□□□ -1.46
DDR48YMR173W LSB6P42951 607 aa5.95□□□□□ -1.46
DDR48YMR173W MSC7P38694 644 aa5.94□□□□□ -1.46
DDR48YMR173W YNL108CP53929 270 aa5.94□□□□□ -1.46
DDR48YMR173W TAT1P38085 619 aa5.93□□□□□ -1.46
DDR48YMR173W AIM9P40053 627 aaKnown RBP5.93□□□□□ -1.46
DDR48YMR173W ALD2P47771 506 aa5.93□□□□□ -1.46
DDR48YMR173W PRY1P47032 299 aa5.92□□□□□ -1.46
DDR48YMR173W RIM21P48565 533 aa5.92□□□□□ -1.46
DDR48YMR173W YNL165WP53891 406 aa5.92□□□□□ -1.46
DDR48YMR173W RDS2P19541 446 aaKnown RBP5.91□□□□□ -1.46
DDR48YMR173W RPS6AP0CX37 236 aaKnown RBP5.9□□□□□ -1.46
DDR48YMR173W RPS6BP0CX38 236 aaPredicted RBP5.9□□□□□ -1.46
DDR48YMR173W RGP1P16664 663 aa5.9□□□□□ -1.46
DDR48YMR173W MCM1P11746 286 aa5.89□□□□□ -1.47
DDR48YMR173W RPP1AP05318 106 aaPredicted RBP5.88□□□□□ -1.47
DDR48YMR173W YTA6P40328 754 aa5.87□□□□□ -1.47
DDR48YMR173W YFL034WP43564 1073 aa5.87□□□□□ -1.47
DDR48YMR173W YPL034WQ03083 165 aa5.87□□□□□ -1.47
DDR48YMR173W MLF3P32047 452 aa5.86□□□□□ -1.47
DDR48YMR173W NTH2P35172 780 aa5.86□□□□□ -1.47
DDR48YMR173W TPS3P38426 1054 aaKnown RBP5.85□□□□□ -1.47
DDR48YMR173W MAC1P35192 417 aa5.84□□□□□ -1.47
DDR48YMR173W Q0182Q9ZZW1 134 aa5.84□□□□□ -1.47
DDR48YMR173W NHA1Q99271 985 aa5.83□□□□□ -1.48
DDR48YMR173W PGM2P37012 569 aaKnown RBP5.82□□□□□ -1.48
DDR48YMR173W ALG14P38242 237 aa5.82□□□□□ -1.48
DDR48YMR173W BUD9P53226 547 aa5.82□□□□□ -1.48
DDR48YMR173W ALO1P54783 526 aaKnown RBP5.82□□□□□ -1.48
DDR48YMR173W HEH2Q03281 663 aa5.82□□□□□ -1.48
DDR48YMR173W MRX10Q05648 414 aa5.82□□□□□ -1.48
DDR48YMR173W PDI1P17967 522 aaKnown RBP5.81□□□□□ -1.48
DDR48YMR173W PRK1P40494 810 aa5.81□□□□□ -1.48
DDR48YMR173W YJL007CP47080 104 aa5.81□□□□□ -1.48
DDR48YMR173W TSC13Q99190 310 aa5.8□□□□□ -1.48
DDR48YMR173W ENO1P00924 437 aaKnown RBP5.79□□□□□ -1.48
DDR48YMR173W CYT1P07143 309 aa5.78□□□□□ -1.48
DDR48YMR173W NAR1P23503 491 aaKnown RBP5.78□□□□□ -1.48
DDR48YMR173W INP52P50942 1183 aa5.78□□□□□ -1.48
DDR48YMR173W SKP1P52286 194 aa5.78□□□□□ -1.48
DDR48YMR173W MTO1P53070 669 aa5.78□□□□□ -1.48
DDR48YMR173W PEP12P32854 288 aa5.76□□□□□ -1.49
DDR48YMR173W OMA1P36163 345 aa5.76□□□□□ -1.49
DDR48YMR173W NCL1P38205 684 aaKnown RBP5.76□□□□□ -1.49
DDR48YMR173W GIS4Q04233 774 aa5.76□□□□□ -1.49
DDR48YMR173W GLT1Q12680 2145 aaKnown RBP5.76□□□□□ -1.49
DDR48YMR173W AI3P03877 415 aa5.75□□□□□ -1.49
DDR48YMR173W UTP4Q06679 776 aaKnown RBP5.75□□□□□ -1.49
DDR48YMR173W CUS1Q02554 436 aaPredicted RBP5.74□□□□□ -1.49
DDR48YMR173W PGM1P33401 570 aaKnown RBP5.73□□□□□ -1.49
DDR48YMR173W BIM1P40013 344 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms