RNA–Protein interactions for RNA: YMR168C

CEP3, Transcript of Essential kinetochore protein, yeast

Gene CEP3, Length 1,827 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CEP3	YMR168C	PNP1	Q05788	311 aa		4.65	□□□□□ -1.67
CEP3	YMR168C	CYT1	P07143	309 aa		4.64	□□□□□ -1.67
CEP3	YMR168C	ERP5	P38819	212 aa		4.64	□□□□□ -1.67
CEP3	YMR168C	BDS1	Q08347	646 aa		4.64	□□□□□ -1.67
CEP3	YMR168C	VAN1	P23642	535 aa		4.63	□□□□□ -1.67
CEP3	YMR168C	YFL034W	P43564	1073 aa		4.63	□□□□□ -1.67
CEP3	YMR168C	ALD4	P46367	519 aa	Known RBP	4.63	□□□□□ -1.67
CEP3	YMR168C	PUF6	Q04373	656 aa	Known RBP	4.63	□□□□□ -1.67
CEP3	YMR168C	YBL113C	Q7M4S9	792 aa		4.63	□□□□□ -1.67
CEP3	YMR168C	TRL1	P09880	827 aa	Known RBP	4.62	□□□□□ -1.67
CEP3	YMR168C	BOI1	P38041	980 aa	Known RBP	4.62	□□□□□ -1.67
CEP3	YMR168C	YDR444W	Q04093	687 aa		4.62	□□□□□ -1.67
CEP3	YMR168C	KAR5	Q04746	504 aa		4.62	□□□□□ -1.67
CEP3	YMR168C	SEN54	Q02825	467 aa	Predicted RBP	4.62	□□□□□ -1.67
CEP3	YMR168C	YPQ2	Q06328	317 aa		4.62	□□□□□ -1.67
CEP3	YMR168C	SRS2	P12954	1174 aa		4.61	□□□□□ -1.67
CEP3	YMR168C	AFT1	P22149	690 aa		4.61	□□□□□ -1.67
CEP3	YMR168C	NGR1	P32831	672 aa	Known RBP	4.61	□□□□□ -1.67
CEP3	YMR168C	SGS1	P35187	1447 aa		4.61	□□□□□ -1.67
CEP3	YMR168C	UBP1	P25037	809 aa		4.6	□□□□□ -1.67
CEP3	YMR168C	UGA3	P26370	528 aa		4.6	□□□□□ -1.67
CEP3	YMR168C	TBS1	P38114	1094 aa		4.6	□□□□□ -1.67
CEP3	YMR168C	MDJ2	P42834	146 aa		4.6	□□□□□ -1.67
CEP3	YMR168C	YNL165W	P53891	406 aa		4.6	□□□□□ -1.67
CEP3	YMR168C	YDL176W	Q12027	708 aa		4.6	□□□□□ -1.67
CEP3	YMR168C	DLD1	P32891	587 aa		4.6	□□□□□ -1.67
CEP3	YMR168C	YBR197C	P38306	217 aa		4.6	□□□□□ -1.67
CEP3	YMR168C	YJR115W	P47152	169 aa		4.6	□□□□□ -1.67
CEP3	YMR168C	CAB1	Q04430	367 aa		4.6	□□□□□ -1.67
CEP3	YMR168C	TRS33	Q99394	268 aa		4.6	□□□□□ -1.67
CEP3	YMR168C	GRS1	P38088	690 aa	Known RBP	4.59	□□□□□ -1.67
CEP3	YMR168C	IPL1	P38991	367 aa		4.59	□□□□□ -1.67
CEP3	YMR168C	AAD14	P42884	376 aa		4.59	□□□□□ -1.67
CEP3	YMR168C	SUM1	P46676	1062 aa		4.59	□□□□□ -1.67
CEP3	YMR168C	MSB3	P48566	633 aa	Predicted RBP	4.59	□□□□□ -1.67
CEP3	YMR168C	HST3	P53687	447 aa		4.59	□□□□□ -1.67
CEP3	YMR168C	FOX2	Q02207	900 aa	Known RBP	4.59	□□□□□ -1.67
CEP3	YMR168C	HXT5	P38695	592 aa		4.58	□□□□□ -1.68
CEP3	YMR168C	SSN3	P39073	555 aa		4.58	□□□□□ -1.68
CEP3	YMR168C	PTK2	P47116	818 aa	Known RBP	4.58	□□□□□ -1.68
CEP3	YMR168C	LCB5	Q06147	687 aa	Known RBP	4.58	□□□□□ -1.68
CEP3	YMR168C	ISC10	P32645	267 aa		4.58	□□□□□ -1.68
CEP3	YMR168C	KTR2	P33550	425 aa		4.57	□□□□□ -1.68
CEP3	YMR168C	SHM1	P37292	490 aa	Predicted RBP	4.57	□□□□□ -1.68
CEP3	YMR168C	GLO3	P38682	493 aa	Known RBP	4.57	□□□□□ -1.68
CEP3	YMR168C	QDR1	P40475	563 aa		4.57	□□□□□ -1.68
CEP3	YMR168C	TY1A-DR3	Q12441	440 aa		4.57	□□□□□ -1.68
CEP3	YMR168C	FUR4	P05316	633 aa	Known RBP	4.56	□□□□□ -1.68
CEP3	YMR168C	DLD3	P39976	496 aa	Known RBP	4.56	□□□□□ -1.68
CEP3	YMR168C	RPS31	P05759	152 aa	Known RBP	4.56	□□□□□ -1.68
CEP3	YMR168C	RPB10	P22139	70 aa		4.56	□□□□□ -1.68
CEP3	YMR168C	YHL050C	P38721	697 aa		4.56	□□□□□ -1.68
CEP3	YMR168C	YHR219W	P38900	624 aa		4.56	□□□□□ -1.68
CEP3	YMR168C	LSO1	Q3E827	93 aa		4.56	□□□□□ -1.68
CEP3	YMR168C	FRT1	Q99332	602 aa		4.56	□□□□□ -1.68
CEP3	YMR168C	Q0182	Q9ZZW1	134 aa		4.56	□□□□□ -1.68
CEP3	YMR168C	ARG82	P07250	355 aa		4.54	□□□□□ -1.68
CEP3	YMR168C	ALA1	P40825	983 aa	Known RBP	4.54	□□□□□ -1.68
CEP3	YMR168C	CWH41	P53008	833 aa		4.54	□□□□□ -1.68
CEP3	YMR168C	ATG1	P53104	897 aa		4.54	□□□□□ -1.68
CEP3	YMR168C	WHI5	Q12416	295 aa		4.54	□□□□□ -1.68
CEP3	YMR168C	SPA2	P23201	1466 aa	Known RBP	4.54	□□□□□ -1.68
CEP3	YMR168C	MLF3	P32047	452 aa		4.53	□□□□□ -1.68
CEP3	YMR168C	SLA1	P32790	1244 aa		4.53	□□□□□ -1.68
CEP3	YMR168C	MCM1	P11746	286 aa		4.53	□□□□□ -1.68
CEP3	YMR168C	JJJ2	P46997	583 aa		4.53	□□□□□ -1.68
CEP3	YMR168C	YJR098C	P47139	656 aa		4.53	□□□□□ -1.68
CEP3	YMR168C	NUT2	Q06213	157 aa		4.53	□□□□□ -1.68
CEP3	YMR168C	RPP2B	P02400	110 aa	Known RBP	4.52	□□□□□ -1.69
CEP3	YMR168C	MRPL33	P20084	86 aa		4.52	□□□□□ -1.69
CEP3	YMR168C	RRN6	P32786	894 aa		4.52	□□□□□ -1.69
CEP3	YMR168C	SLD2	P34252	453 aa		4.52	□□□□□ -1.69
CEP3	YMR168C	GPI13	Q07830	1017 aa		4.52	□□□□□ -1.69
CEP3	YMR168C	MSC6	Q08818	692 aa	Known RBP	4.52	□□□□□ -1.69
CEP3	YMR168C	SRF1	Q12516	437 aa		4.52	□□□□□ -1.69
CEP3	YMR168C	VMA3	P25515	160 aa		4.51	□□□□□ -1.69
CEP3	YMR168C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
CEP3	YMR168C	SUT1	P53032	299 aa	Known RBP	4.51	□□□□□ -1.69
CEP3	YMR168C	APC11	Q12157	165 aa		4.51	□□□□□ -1.69
CEP3	YMR168C	STM1	P39015	273 aa	Known RBP	4.51	□□□□□ -1.69
CEP3	YMR168C	RTT106	P40161	455 aa		4.51	□□□□□ -1.69
CEP3	YMR168C	MSN5	P52918	1224 aa		4.51	□□□□□ -1.69
CEP3	YMR168C	TCB1	Q12466	1186 aa		4.51	□□□□□ -1.69
CEP3	YMR168C	ATE1	P16639	503 aa		4.5	□□□□□ -1.69
CEP3	YMR168C	IRE1	P32361	1115 aa		4.5	□□□□□ -1.69
CEP3	YMR168C	NUP85	P46673	744 aa		4.5	□□□□□ -1.69
CEP3	YMR168C	ACF4	P47129	309 aa		4.5	□□□□□ -1.69
CEP3	YMR168C	MNL2	Q12205	849 aa		4.5	□□□□□ -1.69
CEP3	YMR168C	SSN2	P38931	1420 aa		4.49	□□□□□ -1.69
CEP3	YMR168C	DAL1	P32375	460 aa		4.49	□□□□□ -1.69
CEP3	YMR168C	PSH1	Q12161	406 aa		4.49	□□□□□ -1.69
CEP3	YMR168C	SCD5	P34758	872 aa		4.49	□□□□□ -1.69
CEP3	YMR168C	QDR2	P40474	542 aa		4.49	□□□□□ -1.69
CEP3	YMR168C	ALD2	P47771	506 aa		4.49	□□□□□ -1.69
CEP3	YMR168C	PDC6	P26263	563 aa	Known RBP	4.48	□□□□□ -1.69
CEP3	YMR168C	HEM3	P28789	327 aa		4.48	□□□□□ -1.69
CEP3	YMR168C	MET4	P32389	672 aa		4.48	□□□□□ -1.69
CEP3	YMR168C	LSC2	P53312	427 aa		4.48	□□□□□ -1.69
CEP3	YMR168C	MTC5	Q03897	1148 aa		4.48	□□□□□ -1.69
CEP3	YMR168C	OPT2	Q06593	877 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms