RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C VRP1P37370 817 aa9.79□□□□□ -0.84
ATG17YLR423C QDR1P40475 563 aa9.79□□□□□ -0.84
ATG17YLR423C MDJ2P42834 146 aa9.79□□□□□ -0.84
ATG17YLR423C ISU1Q03020 165 aa9.79□□□□□ -0.84
ATG17YLR423C FBP26P32604 452 aa9.78□□□□□ -0.84
ATG17YLR423C RPP2BP02400 110 aaKnown RBP9.77□□□□□ -0.85
ATG17YLR423C SWI5P08153 709 aa9.77□□□□□ -0.85
ATG17YLR423C UBP1P25037 809 aa9.76□□□□□ -0.85
ATG17YLR423C SPT2P06843 333 aaPredicted RBP9.75□□□□□ -0.85
ATG17YLR423C MET10P39692 1035 aa9.75□□□□□ -0.85
ATG17YLR423C ACF4P47129 309 aa9.75□□□□□ -0.85
ATG17YLR423C PPX1P38698 397 aa9.74□□□□□ -0.85
ATG17YLR423C CST6P40535 587 aa9.74□□□□□ -0.85
ATG17YLR423C NGR1P32831 672 aaKnown RBP9.73□□□□□ -0.85
ATG17YLR423C POL32P47110 350 aa9.73□□□□□ -0.85
ATG17YLR423C SUV3P32580 737 aa9.72□□□□□ -0.85
ATG17YLR423C SDH2P21801 266 aa9.71□□□□□ -0.86
ATG17YLR423C FOX2Q02207 900 aaKnown RBP9.71□□□□□ -0.86
ATG17YLR423C DFG5Q05031 458 aa9.71□□□□□ -0.86
ATG17YLR423C BDS1Q08347 646 aa9.71□□□□□ -0.86
ATG17YLR423C NUT2Q06213 157 aa9.7□□□□□ -0.86
ATG17YLR423C LSO1Q3E827 93 aa9.7□□□□□ -0.86
ATG17YLR423C AIM44Q99299 758 aa9.7□□□□□ -0.86
ATG17YLR423C WTM2Q12206 467 aa9.69□□□□□ -0.86
ATG17YLR423C MRT4P33201 236 aaKnown RBP9.68□□□□□ -0.86
ATG17YLR423C PAM1P37304 830 aaKnown RBP9.68□□□□□ -0.86
ATG17YLR423C SPR3P41901 512 aa9.68□□□□□ -0.86
ATG17YLR423C ALD2P47771 506 aa9.68□□□□□ -0.86
ATG17YLR423C WHI5Q12416 295 aa9.68□□□□□ -0.86
ATG17YLR423C STE6P12866 1290 aa9.67□□□□□ -0.86
ATG17YLR423C ISC10P32645 267 aa9.67□□□□□ -0.86
ATG17YLR423C DLD3P39976 496 aaKnown RBP9.67□□□□□ -0.86
ATG17YLR423C YBR197CP38306 217 aa9.66□□□□□ -0.86
ATG17YLR423C MGE1P38523 228 aa9.66□□□□□ -0.86
ATG17YLR423C FRT1Q99332 602 aa9.66□□□□□ -0.86
ATG17YLR423C YBL086CP38177 466 aa9.65□□□□□ -0.86
ATG17YLR423C UTP7P40055 554 aaKnown RBP9.64□□□□□ -0.87
ATG17YLR423C ATE1P16639 503 aa9.63□□□□□ -0.87
ATG17YLR423C BCK2P33306 851 aa9.62□□□□□ -0.87
ATG17YLR423C BOI1P38041 980 aaKnown RBP9.62□□□□□ -0.87
ATG17YLR423C HED1Q03937 162 aa9.62□□□□□ -0.87
ATG17YLR423C CAB1Q04430 367 aa9.62□□□□□ -0.87
ATG17YLR423C TRS120Q04183 1289 aa9.61□□□□□ -0.87
ATG17YLR423C RRP15Q06511 250 aaPredicted RBP9.6□□□□□ -0.87
ATG17YLR423C MCM1P11746 286 aa9.59□□□□□ -0.87
ATG17YLR423C SUM1P46676 1062 aa9.59□□□□□ -0.87
ATG17YLR423C UFD2P54860 961 aa9.59□□□□□ -0.87
ATG17YLR423C OYE2Q03558 400 aaKnown RBP9.59□□□□□ -0.87
ATG17YLR423C ALA1P40825 983 aaKnown RBP9.58□□□□□ -0.88
ATG17YLR423C SUT1P53032 299 aaKnown RBP9.58□□□□□ -0.88
ATG17YLR423C AMS1P22855 1083 aa9.57□□□□□ -0.88
ATG17YLR423C SEC8P32855 1065 aa9.57□□□□□ -0.88
ATG17YLR423C SCD5P34758 872 aa9.57□□□□□ -0.88
ATG17YLR423C RTT106P40161 455 aa9.57□□□□□ -0.88
ATG17YLR423C RPB10P22139 70 aa9.56□□□□□ -0.88
ATG17YLR423C MET4P32389 672 aa9.56□□□□□ -0.88
ATG17YLR423C MRPL33P20084 86 aa9.55□□□□□ -0.88
ATG17YLR423C UGA3P26370 528 aa9.55□□□□□ -0.88
ATG17YLR423C YPQ2Q06328 317 aa9.55□□□□□ -0.88
ATG17YLR423C HXT5P38695 592 aa9.54□□□□□ -0.88
ATG17YLR423C SVF1Q05515 481 aa9.54□□□□□ -0.88
ATG17YLR423C APC11Q12157 165 aa9.54□□□□□ -0.88
ATG17YLR423C XDJ1P39102 459 aa9.53□□□□□ -0.88
ATG17YLR423C HST3P53687 447 aa9.5□□□□□ -0.89
ATG17YLR423C MET32Q12041 191 aa9.5□□□□□ -0.89
ATG17YLR423C Q0182Q9ZZW1 134 aa9.5□□□□□ -0.89
ATG17YLR423C GCD6P32501 712 aaKnown RBP9.49□□□□□ -0.89
ATG17YLR423C SMC1P32908 1225 aa9.49□□□□□ -0.89
ATG17YLR423C MET1P36150 593 aa9.49□□□□□ -0.89
ATG17YLR423C YJR107WP47145 328 aa9.49□□□□□ -0.89
ATG17YLR423C CLA4P48562 842 aa9.49□□□□□ -0.89
ATG17YLR423C STB3Q12427 513 aa9.49□□□□□ -0.89
ATG17YLR423C ARG82P07250 355 aa9.48□□□□□ -0.89
ATG17YLR423C VMA3P25515 160 aa9.48□□□□□ -0.89
ATG17YLR423C RPT1P33299 467 aaKnown RBP9.48□□□□□ -0.89
ATG17YLR423C LDH1P38139 375 aa9.48□□□□□ -0.89
ATG17YLR423C GPI13Q07830 1017 aa9.48□□□□□ -0.89
ATG17YLR423C NAP1P25293 417 aaKnown RBP9.47□□□□□ -0.89
ATG17YLR423C YTA6P40328 754 aa9.47□□□□□ -0.89
ATG17YLR423C HXT8P40886 569 aa9.47□□□□□ -0.89
ATG17YLR423C ORC1P54784 914 aaPredicted RBP9.47□□□□□ -0.89
ATG17YLR423C JIP5Q06214 492 aaPredicted RBP9.47□□□□□ -0.89
ATG17YLR423C FIR1P40020 876 aa9.46□□□□□ -0.9
ATG17YLR423C YNL011CP53980 444 aa9.46□□□□□ -0.9
ATG17YLR423C UTP4Q06679 776 aaKnown RBP9.46□□□□□ -0.9
ATG17YLR423C PHO4P07270 312 aaKnown RBP9.45□□□□□ -0.9
ATG17YLR423C DYS1P38791 387 aa9.45□□□□□ -0.9
ATG17YLR423C SAM37P50110 327 aa9.45□□□□□ -0.9
ATG17YLR423C CDC4P07834 779 aa9.44□□□□□ -0.9
ATG17YLR423C MLF3P32047 452 aa9.44□□□□□ -0.9
ATG17YLR423C MSB3P48566 633 aaPredicted RBP9.44□□□□□ -0.9
ATG17YLR423C CDC55Q00362 526 aa9.44□□□□□ -0.9
ATG17YLR423C MNL2Q12205 849 aa9.44□□□□□ -0.9
ATG17YLR423C SRF1Q12516 437 aa9.44□□□□□ -0.9
ATG17YLR423C ASH1P34233 588 aa9.43□□□□□ -0.9
ATG17YLR423C OXR1Q08952 273 aa9.43□□□□□ -0.9
ATG17YLR423C AHP1P38013 176 aaKnown RBP9.42□□□□□ -0.9
ATG17YLR423C RGA1P39083 1007 aa9.42□□□□□ -0.9
ATG17YLR423C QDR2P40474 542 aa9.42□□□□□ -0.9
ATG17YLR423C AAD14P42884 376 aa9.42□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms