RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP2	YLR335W	YRF1-2	P40105	1681 aa		5.19	□□□□□ -1.58
NUP2	YLR335W	HSP104	P31539	908 aa	Known RBP	5.19	□□□□□ -1.58
NUP2	YLR335W	TY1B-NL2	Q99337	1749 aa	Known RBP	5.19	□□□□□ -1.58
NUP2	YLR335W	TPM1	P17536	199 aa	Known RBP	5.19	□□□□□ -1.58
NUP2	YLR335W	TRL1	P09880	827 aa	Known RBP	5.18	□□□□□ -1.58
NUP2	YLR335W	HO	P09932	586 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	MRP7	P12687	371 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	KCC4	P25389	1037 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	MCM2	P29469	868 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	YBR287W	P38355	427 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	HOS3	Q02959	697 aa	Known RBP	5.18	□□□□□ -1.58
NUP2	YLR335W	YLR271W	Q06152	274 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	CYC8	P14922	966 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	TTI1	P36097	1038 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	PBY1	P38254	753 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	BOI2	P39969	1040 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	BDP1	P46678	594 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	PEX14	P53112	341 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	HXT17	P53631	564 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	FPR4	Q06205	392 aa	Predicted RBP	5.18	□□□□□ -1.58
NUP2	YLR335W	NCB2	Q92317	146 aa		5.18	□□□□□ -1.58
NUP2	YLR335W	RPL19A	P0CX82	189 aa	Known RBP	5.17	□□□□□ -1.58
NUP2	YLR335W	RPL19B	P0CX83	189 aa	Predicted RBP	5.17	□□□□□ -1.58
NUP2	YLR335W	RAD24	P32641	659 aa		5.17	□□□□□ -1.58
NUP2	YLR335W	CCT5	P40413	562 aa	Known RBP	5.17	□□□□□ -1.58
NUP2	YLR335W	YDR306C	Q06640	478 aa		5.17	□□□□□ -1.58
NUP2	YLR335W	PEX19	Q07418	342 aa		5.17	□□□□□ -1.58
NUP2	YLR335W	APC11	Q12157	165 aa		5.17	□□□□□ -1.58
NUP2	YLR335W	TFC8	Q12308	588 aa		5.17	□□□□□ -1.58
NUP2	YLR335W	MRPL10	P36520	322 aa		5.16	□□□□□ -1.58
NUP2	YLR335W	SSF1	P38789	453 aa	Predicted RBP	5.16	□□□□□ -1.58
NUP2	YLR335W	SPO22	P40511	975 aa		5.16	□□□□□ -1.58
NUP2	YLR335W	CWH41	P53008	833 aa		5.16	□□□□□ -1.58
NUP2	YLR335W	BRE1	Q07457	700 aa	Known RBP	5.16	□□□□□ -1.58
NUP2	YLR335W	YAH1	Q12184	172 aa	Known RBP	5.16	□□□□□ -1.58
NUP2	YLR335W	CEP3	P40969	608 aa		5.16	□□□□□ -1.58
NUP2	YLR335W	DNM1	P54861	757 aa		5.16	□□□□□ -1.58
NUP2	YLR335W	PSK2	Q08217	1101 aa		5.16	□□□□□ -1.58
NUP2	YLR335W	DCD1	P06773	312 aa		5.15	□□□□□ -1.58
NUP2	YLR335W	YGL081W	P53156	320 aa		5.15	□□□□□ -1.59
NUP2	YLR335W	RAD4	P14736	754 aa		5.14	□□□□□ -1.59
NUP2	YLR335W	LTV1	P34078	463 aa		5.14	□□□□□ -1.59
NUP2	YLR335W	ECM21	P38167	1117 aa	Known RBP	5.14	□□□□□ -1.59
NUP2	YLR335W	CST6	P40535	587 aa		5.14	□□□□□ -1.59
NUP2	YLR335W	YJR008W	P47085	338 aa		5.14	□□□□□ -1.59
NUP2	YLR335W	MLC1	P53141	149 aa		5.14	□□□□□ -1.59
NUP2	YLR335W	YMR196W	Q04336	1088 aa		5.14	□□□□□ -1.59
NUP2	YLR335W	RIM20	Q12033	661 aa		5.14	□□□□□ -1.59
NUP2	YLR335W	SPC110	P32380	944 aa		5.14	□□□□□ -1.59
NUP2	YLR335W	PRX1	P34227	261 aa	Known RBP	5.14	□□□□□ -1.59
NUP2	YLR335W	AAP1	P37898	856 aa	Known RBP	5.14	□□□□□ -1.59
NUP2	YLR335W	PDR18	P53756	1333 aa		5.13	□□□□□ -1.59
NUP2	YLR335W	SIS2	P36024	562 aa		5.13	□□□□□ -1.59
NUP2	YLR335W	DID4	P36108	232 aa		5.13	□□□□□ -1.59
NUP2	YLR335W	NPR3	P38742	1146 aa		5.13	□□□□□ -1.59
NUP2	YLR335W	CIN4	P39110	191 aa		5.13	□□□□□ -1.59
NUP2	YLR335W	AIM9	P40053	627 aa	Known RBP	5.13	□□□□□ -1.59
NUP2	YLR335W	SMC3	P47037	1230 aa		5.13	□□□□□ -1.59
NUP2	YLR335W	DDP1	Q99321	188 aa	Known RBP	5.13	□□□□□ -1.59
NUP2	YLR335W	TFG2	P41896	400 aa	Predicted RBP	5.12	□□□□□ -1.59
NUP2	YLR335W	YGR130C	P53278	816 aa		5.12	□□□□□ -1.59
NUP2	YLR335W	SFI1	Q12369	946 aa		5.12	□□□□□ -1.59
NUP2	YLR335W	RRP5	Q05022	1729 aa	Known RBP	5.12	□□□□□ -1.59
NUP2	YLR335W	YGR122W	P53272	402 aa		5.12	□□□□□ -1.59
NUP2	YLR335W	VPS60	Q03390	229 aa		5.12	□□□□□ -1.59
NUP2	YLR335W	ELG1	Q12050	791 aa		5.12	□□□□□ -1.59
NUP2	YLR335W	YPL150W	Q12152	901 aa		5.12	□□□□□ -1.59
NUP2	YLR335W	YHL017W	P38745	532 aa		5.11	□□□□□ -1.59
NUP2	YLR335W	YIL055C	P40523	627 aa	Known RBP	5.11	□□□□□ -1.59
NUP2	YLR335W	TIM50	Q02776	476 aa		5.11	□□□□□ -1.59
NUP2	YLR335W	SLM3	Q12093	417 aa		5.11	□□□□□ -1.59
NUP2	YLR335W	PET111	P08468	800 aa		5.11	□□□□□ -1.59
NUP2	YLR335W	ATE1	P16639	503 aa		5.11	□□□□□ -1.59
NUP2	YLR335W	KTR1	P27810	393 aa	Known RBP	5.11	□□□□□ -1.59
NUP2	YLR335W	UBP12	P39538	1254 aa		5.11	□□□□□ -1.59
NUP2	YLR335W	YGL242C	P53066	181 aa		5.11	□□□□□ -1.59
NUP2	YLR335W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
NUP2	YLR335W	MRC1	P25588	1096 aa		5.1	□□□□□ -1.59
NUP2	YLR335W	OSH3	P38713	996 aa	Known RBP	5.1	□□□□□ -1.59
NUP2	YLR335W	TIF4632	P39936	914 aa	Known RBP	5.1	□□□□□ -1.59
NUP2	YLR335W	MEC3	Q02574	474 aa		5.1	□□□□□ -1.59
NUP2	YLR335W	SUP35	P05453	685 aa	Known RBP	5.09	□□□□□ -1.59
NUP2	YLR335W	FRS2	P15625	503 aa	Known RBP	5.09	□□□□□ -1.59
NUP2	YLR335W	PRP5	P21372	849 aa	Predicted RBP	5.09	□□□□□ -1.59
NUP2	YLR335W	SWC3	P31376	625 aa		5.09	□□□□□ -1.59
NUP2	YLR335W	NUP133	P36161	1157 aa		5.09	□□□□□ -1.59
NUP2	YLR335W	TGL3	P40308	642 aa		5.09	□□□□□ -1.59
NUP2	YLR335W	CTF18	P49956	741 aa		5.09	□□□□□ -1.59
NUP2	YLR335W	SGD1	Q06132	899 aa		5.09	□□□□□ -1.59
NUP2	YLR335W	NOP14	Q99207	810 aa	Known RBP	5.09	□□□□□ -1.59
NUP2	YLR335W	FKS3	Q04952	1785 aa		5.09	□□□□□ -1.59
NUP2	YLR335W	SES1	P07284	462 aa	Known RBP	5.09	□□□□□ -1.59
NUP2	YLR335W	RFT1	P38206	574 aa	Predicted RBP	5.09	□□□□□ -1.59
NUP2	YLR335W	RCR1	P38212	213 aa		5.09	□□□□□ -1.59
NUP2	YLR335W	SET1	P38827	1080 aa	Known RBP	5.09	□□□□□ -1.59
NUP2	YLR335W	MRPS35	P53292	345 aa		5.09	□□□□□ -1.59
NUP2	YLR335W	SWI1	P09547	1314 aa		5.09	□□□□□ -1.59
NUP2	YLR335W	DUR1,2	P32528	1835 aa	Known RBP	5.09	□□□□□ -1.6
NUP2	YLR335W	CPA2	P03965	1118 aa	Known RBP	5.08	□□□□□ -1.6
NUP2	YLR335W	TY4B-H	P0C2J7	1802 aa		5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms