RNA–Protein interactions for RNA: YLR048W

RPS0B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS0B, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS0B	YLR048W	BUD31	P25337	157 aa	Predicted RBP	6.45	□□□□□ -1.38
RPS0B	YLR048W	VAC17	P25591	423 aa		6.45	□□□□□ -1.38
RPS0B	YLR048W	RPT1	P33299	467 aa	Known RBP	6.45	□□□□□ -1.38
RPS0B	YLR048W	OSW7	P43611	510 aa		6.45	□□□□□ -1.38
RPS0B	YLR048W	VPS16	Q03308	798 aa		6.45	□□□□□ -1.38
RPS0B	YLR048W	HDA3	Q06623	655 aa		6.45	□□□□□ -1.38
RPS0B	YLR048W	PIN2	Q12057	282 aa		6.45	□□□□□ -1.38
RPS0B	YLR048W	CLN2	P20438	545 aa		6.44	□□□□□ -1.38
RPS0B	YLR048W	YKL091C	P33324	310 aa	Known RBP	6.44	□□□□□ -1.38
RPS0B	YLR048W	RRP14	P36080	434 aa	Known RBP	6.44	□□□□□ -1.38
RPS0B	YLR048W	PAC1	P39946	494 aa	Known RBP	6.44	□□□□□ -1.38
RPS0B	YLR048W	SPR28	Q04921	423 aa		6.44	□□□□□ -1.38
RPS0B	YLR048W	NGR1	P32831	672 aa	Known RBP	6.43	□□□□□ -1.38
RPS0B	YLR048W	IOC3	P43596	787 aa		6.43	□□□□□ -1.38
RPS0B	YLR048W	YJL049W	P47048	450 aa		6.43	□□□□□ -1.38
RPS0B	YLR048W	CYT1	P07143	309 aa		6.42	□□□□□ -1.38
RPS0B	YLR048W	CIT2	P08679	460 aa		6.42	□□□□□ -1.38
RPS0B	YLR048W	GCD6	P32501	712 aa	Known RBP	6.42	□□□□□ -1.38
RPS0B	YLR048W	YBR197C	P38306	217 aa		6.42	□□□□□ -1.38
RPS0B	YLR048W	FPR3	P38911	411 aa	Known RBP	6.42	□□□□□ -1.38
RPS0B	YLR048W	TIF11	P38912	153 aa	Known RBP	6.42	□□□□□ -1.38
RPS0B	YLR048W	DAK2	P43550	591 aa		6.42	□□□□□ -1.38
RPS0B	YLR048W	HXT10	P43581	546 aa		6.42	□□□□□ -1.38
RPS0B	YLR048W	UFD2	P54860	961 aa		6.42	□□□□□ -1.38
RPS0B	YLR048W	BUD20	Q08004	166 aa	Predicted RBP	6.42	□□□□□ -1.38
RPS0B	YLR048W	WRS1	Q12109	432 aa	Known RBP	6.42	□□□□□ -1.38
RPS0B	YLR048W	PEP7	P32609	515 aa		6.41	□□□□□ -1.38
RPS0B	YLR048W	ISC10	P32645	267 aa		6.41	□□□□□ -1.38
RPS0B	YLR048W	HAP5	Q02516	242 aa		6.41	□□□□□ -1.38
RPS0B	YLR048W	ATG20	Q07528	640 aa		6.41	□□□□□ -1.38
RPS0B	YLR048W	IOC2	Q12072	812 aa		6.41	□□□□□ -1.38
RPS0B	YLR048W	APC11	Q12157	165 aa		6.41	□□□□□ -1.38
RPS0B	YLR048W	RPS6A	P0CX37	236 aa	Known RBP	6.4	□□□□□ -1.38
RPS0B	YLR048W	RPS6B	P0CX38	236 aa	Predicted RBP	6.4	□□□□□ -1.38
RPS0B	YLR048W	TPD3	P31383	635 aa		6.4	□□□□□ -1.38
RPS0B	YLR048W	VPS35	P34110	944 aa		6.4	□□□□□ -1.38
RPS0B	YLR048W	RTT106	P40161	455 aa		6.4	□□□□□ -1.38
RPS0B	YLR048W	VNX1	P42839	908 aa		6.4	□□□□□ -1.38
RPS0B	YLR048W	ALG12	P53730	551 aa		6.4	□□□□□ -1.38
RPS0B	YLR048W	NSE3	Q05541	303 aa		6.4	□□□□□ -1.38
RPS0B	YLR048W	PAT1	P25644	796 aa	Known RBP	6.39	□□□□□ -1.39
RPS0B	YLR048W	RPS26A	P39938	119 aa	Known RBP	6.39	□□□□□ -1.39
RPS0B	YLR048W	RPS26B	P39939	119 aa	Known RBP	6.39	□□□□□ -1.39
RPS0B	YLR048W	ESF1	Q06344	628 aa	Known RBP	6.39	□□□□□ -1.39
RPS0B	YLR048W	SSF2	Q12153	453 aa	Predicted RBP	6.39	□□□□□ -1.39
RPS0B	YLR048W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.38	□□□□□ -1.39	not detected
RPS0B	YLR048W	SEC61	P32915	480 aa		6.38	□□□□□ -1.39
RPS0B	YLR048W	RRN7	P40992	514 aa		6.38	□□□□□ -1.39
RPS0B	YLR048W	ATG36	P46983	293 aa		6.38	□□□□□ -1.39
RPS0B	YLR048W	RTS3	P53289	263 aa		6.38	□□□□□ -1.39
RPS0B	YLR048W	RPN4	Q03465	531 aa		6.38	□□□□□ -1.39
RPS0B	YLR048W	YBL029C-A	Q3E756	94 aa		6.38	□□□□□ -1.39
RPS0B	YLR048W	SWI5	P08153	709 aa		6.37	□□□□□ -1.39
RPS0B	YLR048W	RPB10	P22139	70 aa		6.37	□□□□□ -1.39
RPS0B	YLR048W	RTG1	P32607	177 aa		6.37	□□□□□ -1.39
RPS0B	YLR048W	MNR2	P35724	969 aa		6.37	□□□□□ -1.39
RPS0B	YLR048W	RRD1	P40454	393 aa	Known RBP	6.37	□□□□□ -1.39
RPS0B	YLR048W	TFG1	P41895	735 aa	Predicted RBP	6.37	□□□□□ -1.39
RPS0B	YLR048W	YGR122W	P53272	402 aa		6.37	□□□□□ -1.39
RPS0B	YLR048W	FOX2	Q02207	900 aa	Known RBP	6.37	□□□□□ -1.39
RPS0B	YLR048W	BDS1	Q08347	646 aa		6.37	□□□□□ -1.39
RPS0B	YLR048W	PRT1	P06103	763 aa	Known RBP	6.36	□□□□□ -1.39
RPS0B	YLR048W	SAM37	P50110	327 aa		6.36	□□□□□ -1.39
RPS0B	YLR048W	CWC24	P53769	259 aa		6.36	□□□□□ -1.39
RPS0B	YLR048W	YNL011C	P53980	444 aa		6.36	□□□□□ -1.39
RPS0B	YLR048W	SPP1	Q03012	353 aa		6.36	□□□□□ -1.39
RPS0B	YLR048W	CAB1	Q04430	367 aa		6.36	□□□□□ -1.39
RPS0B	YLR048W	OXR1	Q08952	273 aa		6.36	□□□□□ -1.39
RPS0B	YLR048W	CYC8	P14922	966 aa		6.35	□□□□□ -1.39
RPS0B	YLR048W	PET112	P33893	541 aa		6.35	□□□□□ -1.39
RPS0B	YLR048W	YJR008W	P47085	338 aa		6.35	□□□□□ -1.39
RPS0B	YLR048W	CDC55	Q00362	526 aa		6.35	□□□□□ -1.39
RPS0B	YLR048W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.35	□□□□□ -1.39	RIP-Chip
RPS0B	YLR048W	YDL129W	Q07555	291 aa		6.35	□□□□□ -1.39
RPS0B	YLR048W	CDC53	Q12018	815 aa	Known RBP	6.35	□□□□□ -1.39
RPS0B	YLR048W	YOR131C	Q12486	218 aa		6.35	□□□□□ -1.39
RPS0B	YLR048W	UTR2	P32623	467 aa		6.34	□□□□□ -1.39
RPS0B	YLR048W	TOM20	P35180	183 aa		6.34	□□□□□ -1.39
RPS0B	YLR048W	NUG1	P40010	520 aa	Known RBP	6.34	□□□□□ -1.39
RPS0B	YLR048W	BUD6	P41697	788 aa		6.34	□□□□□ -1.39
RPS0B	YLR048W	ARH1	P48360	493 aa		6.34	□□□□□ -1.39
RPS0B	YLR048W	ELP4	Q02884	456 aa	Known RBP	6.34	□□□□□ -1.39
RPS0B	YLR048W	TSR4	P25040	408 aa		6.33	□□□□□ -1.4
RPS0B	YLR048W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	6.33	□□□□□ -1.4	not detected
RPS0B	YLR048W	CIC1	P38779	376 aa	Known RBP	6.33	□□□□□ -1.4
RPS0B	YLR048W	SUT1	P53032	299 aa	Known RBP	6.33	□□□□□ -1.4
RPS0B	YLR048W	BNI4	P53858	892 aa		6.33	□□□□□ -1.4
RPS0B	YLR048W	POB3	Q04636	552 aa	Known RBP	6.33	□□□□□ -1.4
RPS0B	YLR048W	UBX5	Q06682	500 aa		6.33	□□□□□ -1.4
RPS0B	YLR048W	RAD2	P07276	1031 aa		6.32	□□□□□ -1.4
RPS0B	YLR048W	SPT16	P32558	1035 aa	Known RBP	6.32	□□□□□ -1.4
RPS0B	YLR048W	BDF2	Q07442	638 aa		6.32	□□□□□ -1.4
RPS0B	YLR048W	MOD5	P07884	428 aa		6.31	□□□□□ -1.4
RPS0B	YLR048W	KTR2	P33550	425 aa		6.31	□□□□□ -1.4
RPS0B	YLR048W	TBS1	P38114	1094 aa		6.31	□□□□□ -1.4
RPS0B	YLR048W	MTO1	P53070	669 aa		6.31	□□□□□ -1.4
RPS0B	YLR048W	NOC3	Q07896	663 aa	Predicted RBP	6.31	□□□□□ -1.4
RPS0B	YLR048W	DAT1	P13483	248 aa	Known RBP	6.3	□□□□□ -1.4
RPS0B	YLR048W	MRPL33	P20084	86 aa		6.3	□□□□□ -1.4
RPS0B	YLR048W	SMC1	P32908	1225 aa		6.3	□□□□□ -1.4

Retrieved 100 of 5,963 RNA–protein pairs in 59.9 ms